Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AL732372.2-207ENST00000445840 183 ntBASIC2.19□□□□□ -2.06
HMGCS2P54868 MTND3P16-201ENST00000452205 344 ntBASIC2.19□□□□□ -2.06
HMGCS2P54868 AC092001.1-201ENST00000453012 261 ntBASIC2.19□□□□□ -2.06
HMGCS2P54868 SEPT14P2-201ENST00000453405 183 ntBASIC2.19□□□□□ -2.06
HMGCS2P54868 SNORD13-201ENST00000459299 104 ntBASIC2.19□□□□□ -2.06
HMGCS2P54868 MTCO3P38-201ENST00000468910 766 ntBASIC2.19□□□□□ -2.06
HMGCS2P54868 RPS29P25-201ENST00000481709 171 ntBASIC2.19□□□□□ -2.06
HMGCS2P54868 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.19□□□□□ -2.06
HMGCS2P54868 HMGB3P3-201ENST00000510526 400 ntBASIC2.19□□□□□ -2.06
HMGCS2P54868 AC074344.1-201ENST00000512823 224 ntBASIC2.19□□□□□ -2.06
HMGCS2P54868 SEPT14P4-201ENST00000513445 186 ntBASIC2.19□□□□□ -2.06
HMGCS2P54868 AC108729.3-201ENST00000513484 108 ntBASIC2.19□□□□□ -2.06
HMGCS2P54868 MIR892C-201ENST00000516410 77 ntBASIC2.19□□□□□ -2.06
HMGCS2P54868 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.19□□□□□ -2.06
HMGCS2P54868 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.19□□□□□ -2.06
HMGCS2P54868 FO082796.1-201ENST00000523795 183 ntBASIC2.19□□□□□ -2.06
HMGCS2P54868 AC109635.3-201ENST00000529536 185 ntBASIC2.19□□□□□ -2.06
HMGCS2P54868 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.19□□□□□ -2.06
HMGCS2P54868 AL121821.2-201ENST00000556081 394 ntBASIC2.19□□□□□ -2.06
HMGCS2P54868 AC087045.1-201ENST00000605856 382 ntBASIC2.19□□□□□ -2.06
HMGCS2P54868 MIR8081-201ENST00000611533 95 ntBASIC2.19□□□□□ -2.06
HMGCS2P54868 AL031601.2-202ENST00000622650 282 ntBASIC2.19□□□□□ -2.06
HMGCS2P54868 AC084768.2-201ENST00000622736 221 ntBASIC2.19□□□□□ -2.06
HMGCS2P54868 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
HMGCS2P54868 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
HMGCS2P54868 ADAM3A-203ENST00000461344 2157 ntBASIC2.18□□□□□ -2.06
HMGCS2P54868 RNU6-942P-201ENST00000363002 107 ntBASIC2.18□□□□□ -2.06
HMGCS2P54868 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
HMGCS2P54868 RNU6-72P-201ENST00000384285 79 ntBASIC2.18□□□□□ -2.06
HMGCS2P54868 MIR10A-201ENST00000385043 110 ntBASIC2.18□□□□□ -2.06
HMGCS2P54868 U3.37-201ENST00000408528 213 ntBASIC2.18□□□□□ -2.06
HMGCS2P54868 RNA5SP247-201ENST00000411181 105 ntBASIC2.18□□□□□ -2.06
HMGCS2P54868 EIF1P1-201ENST00000421436 341 ntBASIC2.18□□□□□ -2.06
HMGCS2P54868 PGBD4P6-201ENST00000421501 610 ntBASIC2.18□□□□□ -2.06
HMGCS2P54868 RPS3AP44-201ENST00000425466 790 ntBASIC2.18□□□□□ -2.06
HMGCS2P54868 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.18□□□□□ -2.06
HMGCS2P54868 AL161651.1-201ENST00000440882 223 ntBASIC2.18□□□□□ -2.06
HMGCS2P54868 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.18□□□□□ -2.06
HMGCS2P54868 PRPS1P1-201ENST00000445305 876 ntBASIC2.18□□□□□ -2.06
HMGCS2P54868 AL021397.1-201ENST00000451806 248 ntBASIC2.18□□□□□ -2.06
HMGCS2P54868 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.18□□□□□ -2.06
HMGCS2P54868 snoU109.2-201ENST00000459316 135 ntBASIC2.18□□□□□ -2.06
HMGCS2P54868 AC116655.1-201ENST00000508324 901 ntBASIC2.18□□□□□ -2.06
HMGCS2P54868 RNU6-1038P-201ENST00000516516 104 ntBASIC2.18□□□□□ -2.06
HMGCS2P54868 SNORA25.17-201ENST00000517184 124 ntBASIC2.18□□□□□ -2.06
HMGCS2P54868 MTND4LP26-201ENST00000518144 282 ntBASIC2.18□□□□□ -2.06
HMGCS2P54868 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.18□□□□□ -2.06
HMGCS2P54868 MTND4P7-201ENST00000523876 130 ntBASIC2.18□□□□□ -2.06
HMGCS2P54868 MTND1P35-201ENST00000526739 508 ntBASIC2.18□□□□□ -2.06
HMGCS2P54868 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.18□□□□□ -2.06
HMGCS2P54868 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.18□□□□□ -2.06
HMGCS2P54868 AC090115.3-201ENST00000553218 849 ntBASIC2.18□□□□□ -2.06
HMGCS2P54868 AL391813.1-201ENST00000603098 260 ntBASIC2.18□□□□□ -2.06
HMGCS2P54868 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.18□□□□□ -2.06
HMGCS2P54868 AC024614.3-201ENST00000637860 256 ntBASIC2.18□□□□□ -2.06
HMGCS2P54868 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.18□□□□□ -2.06
HMGCS2P54868 MTND4P14-201ENST00000435799 1354 ntBASIC2.18□□□□□ -2.06
HMGCS2P54868 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
HMGCS2P54868 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
HMGCS2P54868 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
HMGCS2P54868 Y_RNA.89-201ENST00000363031 102 ntBASIC2.17□□□□□ -2.06
HMGCS2P54868 RNU6-457P-201ENST00000363999 107 ntBASIC2.17□□□□□ -2.06
HMGCS2P54868 RNU6-534P-201ENST00000364877 106 ntBASIC2.17□□□□□ -2.06
HMGCS2P54868 Y_RNA.378-201ENST00000365652 113 ntBASIC2.17□□□□□ -2.06
HMGCS2P54868 RNU1-52P-201ENST00000384190 164 ntBASIC2.17□□□□□ -2.06
HMGCS2P54868 AL627390.1-201ENST00000396055 340 ntBASIC2.17□□□□□ -2.06
HMGCS2P54868 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.17□□□□□ -2.06
HMGCS2P54868 AC004383.1-201ENST00000438135 289 ntBASIC2.17□□□□□ -2.06
HMGCS2P54868 CALM1P1-201ENST00000442082 433 ntBASIC2.17□□□□□ -2.06
HMGCS2P54868 BTF3P15-201ENST00000455606 336 ntBASIC2.17□□□□□ -2.06
HMGCS2P54868 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.17□□□□□ -2.06
HMGCS2P54868 RNU7-167P-201ENST00000459160 62 ntBASIC2.17□□□□□ -2.06
HMGCS2P54868 DYNLL1P5-201ENST00000467158 270 ntBASIC2.17□□□□□ -2.06
HMGCS2P54868 AC087884.1-201ENST00000469738 328 ntBASIC2.17□□□□□ -2.06
HMGCS2P54868 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.17□□□□□ -2.06
HMGCS2P54868 HMGB1P30-201ENST00000492455 606 ntBASIC2.17□□□□□ -2.06
HMGCS2P54868 RPS29P11-201ENST00000496507 171 ntBASIC2.17□□□□□ -2.06
HMGCS2P54868 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.17□□□□□ -2.06
HMGCS2P54868 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.17□□□□□ -2.06
HMGCS2P54868 SNORA25.15-201ENST00000516487 89 ntBASIC2.17□□□□□ -2.06
HMGCS2P54868 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.17□□□□□ -2.06
HMGCS2P54868 SNORD19.2-201ENST00000516978 73 ntBASIC2.17□□□□□ -2.06
HMGCS2P54868 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.17□□□□□ -2.06
HMGCS2P54868 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.17□□□□□ -2.06
HMGCS2P54868 MIR3199-1-201ENST00000582434 88 ntBASIC2.17□□□□□ -2.06
HMGCS2P54868 AC010525.2-201ENST00000590920 195 ntBASIC2.17□□□□□ -2.06
HMGCS2P54868 AC002984.1-201ENST00000591692 448 ntBASIC2.17□□□□□ -2.06
HMGCS2P54868 AC107304.1-201ENST00000604229 296 ntBASIC2.17□□□□□ -2.06
HMGCS2P54868 RMST_3.1-201ENST00000611651 109 ntBASIC2.17□□□□□ -2.06
HMGCS2P54868 AC092794.1-201ENST00000612734 582 ntBASIC2.17□□□□□ -2.06
HMGCS2P54868 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
HMGCS2P54868 AC007014.2-201ENST00000615581 479 ntBASIC2.17□□□□□ -2.06
HMGCS2P54868 MIR203B-201ENST00000636080 86 ntBASIC2.17□□□□□ -2.06
HMGCS2P54868 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
HMGCS2P54868 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
HMGCS2P54868 MTND5P30-201ENST00000452896 1731 ntBASIC2.17□□□□□ -2.06
HMGCS2P54868 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.16□□□□□ -2.06
HMGCS2P54868 RNU6-522P-201ENST00000364497 107 ntBASIC2.16□□□□□ -2.06
HMGCS2P54868 Y_RNA.324-201ENST00000365165 102 ntBASIC2.16□□□□□ -2.06
HMGCS2P54868 RNU4-66P-201ENST00000365199 138 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms