Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 PRPS1P1-201ENST00000445305 876 ntBASIC2.48□□□□□ -2.01
LBX1P52954 AC117503.1-201ENST00000472241 394 ntBASIC2.48□□□□□ -2.01
LBX1P52954 AF213884.2-201ENST00000510417 903 ntBASIC2.48□□□□□ -2.01
LBX1P52954 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.48□□□□□ -2.01
LBX1P52954 AC074344.1-201ENST00000512823 224 ntBASIC2.48□□□□□ -2.01
LBX1P52954 RNA5SP220-201ENST00000516298 104 ntBASIC2.48□□□□□ -2.01
LBX1P52954 RNU6-826P-201ENST00000516827 104 ntBASIC2.48□□□□□ -2.01
LBX1P52954 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.48□□□□□ -2.01
LBX1P52954 AC105137.2-201ENST00000569073 466 ntBASIC2.48□□□□□ -2.01
LBX1P52954 MIR3941-201ENST00000582572 103 ntBASIC2.48□□□□□ -2.01
LBX1P52954 AC060780.3-201ENST00000589464 80 ntBASIC2.48□□□□□ -2.01
LBX1P52954 AC008739.2-201ENST00000597006 317 ntBASIC2.48□□□□□ -2.01
LBX1P52954 AC067747.1-201ENST00000608026 250 ntBASIC2.48□□□□□ -2.01
LBX1P52954 FAM157A-202ENST00000615155 405 ntBASIC2.48□□□□□ -2.01
LBX1P52954 AC006504.8-201ENST00000621046 635 ntBASIC2.48□□□□□ -2.01
LBX1P52954 RMST_7.1-201ENST00000621935 268 ntBASIC2.48□□□□□ -2.01
LBX1P52954 AC138627.2-201ENST00000624202 601 ntBASIC2.48□□□□□ -2.01
LBX1P52954 U6.99-201ENST00000637524 83 ntBASIC2.48□□□□□ -2.01
LBX1P52954 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.48□□□□□ -2.01
LBX1P52954 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
LBX1P52954 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
LBX1P52954 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.47□□□□□ -2.01
LBX1P52954 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.47□□□□□ -2.01
LBX1P52954 Y_RNA.453-201ENST00000384223 109 ntBASIC2.47□□□□□ -2.01
LBX1P52954 U3.37-201ENST00000408528 213 ntBASIC2.47□□□□□ -2.01
LBX1P52954 MRPS10P2-201ENST00000431226 381 ntBASIC2.47□□□□□ -2.01
LBX1P52954 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.47□□□□□ -2.01
LBX1P52954 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.47□□□□□ -2.01
LBX1P52954 AC013470.1-201ENST00000453438 462 ntBASIC2.47□□□□□ -2.01
LBX1P52954 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.47□□□□□ -2.01
LBX1P52954 AC080013.2-201ENST00000460866 323 ntBASIC2.47□□□□□ -2.01
LBX1P52954 RPL21P39-201ENST00000463605 483 ntBASIC2.47□□□□□ -2.01
LBX1P52954 AC087190.1-201ENST00000484462 480 ntBASIC2.47□□□□□ -2.01
LBX1P52954 AC093591.1-201ENST00000491435 481 ntBASIC2.47□□□□□ -2.01
LBX1P52954 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.47□□□□□ -2.01
LBX1P52954 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.47□□□□□ -2.01
LBX1P52954 SNORA14.1-201ENST00000516113 141 ntBASIC2.47□□□□□ -2.01
LBX1P52954 RNU6-189P-201ENST00000516120 101 ntBASIC2.47□□□□□ -2.01
LBX1P52954 RNU6-1069P-201ENST00000516612 133 ntBASIC2.47□□□□□ -2.01
LBX1P52954 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.47□□□□□ -2.01
LBX1P52954 COPS8P3-201ENST00000526024 482 ntBASIC2.47□□□□□ -2.01
LBX1P52954 LINC00933-203ENST00000559812 219 ntBASIC2.47□□□□□ -2.01
LBX1P52954 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.47□□□□□ -2.01
LBX1P52954 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
LBX1P52954 AC023043.3-201ENST00000593113 385 ntBASIC2.47□□□□□ -2.01
LBX1P52954 APOOP1-201ENST00000604695 592 ntBASIC2.47□□□□□ -2.01
LBX1P52954 AC123912.5-201ENST00000605470 343 ntBASIC2.47□□□□□ -2.01
LBX1P52954 AC002044.1-201ENST00000606707 158 ntBASIC2.47□□□□□ -2.01
LBX1P52954 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
LBX1P52954 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
LBX1P52954 AC010889.1-201ENST00000566193 2666 ntBASIC2.46□□□□□ -2.01
LBX1P52954 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.46□□□□□ -2.02
LBX1P52954 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
LBX1P52954 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
LBX1P52954 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.46□□□□□ -2.02
LBX1P52954 Y_RNA.157-201ENST00000363638 102 ntBASIC2.46□□□□□ -2.02
LBX1P52954 Y_RNA.191-201ENST00000363972 113 ntBASIC2.46□□□□□ -2.02
LBX1P52954 SNORD56.5-201ENST00000364281 72 ntBASIC2.46□□□□□ -2.02
LBX1P52954 Y_RNA.324-201ENST00000365165 102 ntBASIC2.46□□□□□ -2.02
LBX1P52954 RNU4-66P-201ENST00000365199 138 ntBASIC2.46□□□□□ -2.02
LBX1P52954 Y_RNA.573-201ENST00000384763 105 ntBASIC2.46□□□□□ -2.02
LBX1P52954 AL162578.1-201ENST00000406202 378 ntBASIC2.46□□□□□ -2.02
LBX1P52954 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.46□□□□□ -2.02
LBX1P52954 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.46□□□□□ -2.02
LBX1P52954 ARL5AP1-201ENST00000418991 388 ntBASIC2.46□□□□□ -2.02
LBX1P52954 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.46□□□□□ -2.02
LBX1P52954 UBBP3-201ENST00000445497 241 ntBASIC2.46□□□□□ -2.02
LBX1P52954 RPL7P43-201ENST00000478876 753 ntBASIC2.46□□□□□ -2.02
LBX1P52954 AC092989.1-201ENST00000481235 277 ntBASIC2.46□□□□□ -2.02
LBX1P52954 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.46□□□□□ -2.02
LBX1P52954 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.46□□□□□ -2.02
LBX1P52954 Y_RNA.687-201ENST00000516558 91 ntBASIC2.46□□□□□ -2.02
LBX1P52954 SCARNA16.3-201ENST00000516595 184 ntBASIC2.46□□□□□ -2.02
LBX1P52954 BTF3P12-201ENST00000519620 469 ntBASIC2.46□□□□□ -2.02
LBX1P52954 CYCSP27-201ENST00000527643 293 ntBASIC2.46□□□□□ -2.02
LBX1P52954 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.46□□□□□ -2.02
LBX1P52954 MYL12BP1-201ENST00000569826 507 ntBASIC2.46□□□□□ -2.02
LBX1P52954 MIR4452-201ENST00000583004 71 ntBASIC2.46□□□□□ -2.02
LBX1P52954 U2.17-201ENST00000611454 95 ntBASIC2.46□□□□□ -2.02
LBX1P52954 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.46□□□□□ -2.02
LBX1P52954 U6.42-201ENST00000618440 107 ntBASIC2.46□□□□□ -2.02
LBX1P52954 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.46□□□□□ -2.02
LBX1P52954 MIR6132-201ENST00000622083 109 ntBASIC2.46□□□□□ -2.02
LBX1P52954 SCARNA4-202ENST00000625402 129 ntBASIC2.46□□□□□ -2.02
LBX1P52954 MIR3662-201ENST00000637030 95 ntBASIC2.46□□□□□ -2.02
LBX1P52954 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
LBX1P52954 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.46□□□□□ -2.02
LBX1P52954 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
LBX1P52954 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
LBX1P52954 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
LBX1P52954 RNU1-105P-201ENST00000363470 161 ntBASIC2.45□□□□□ -2.02
LBX1P52954 SNORA51.11-201ENST00000384442 131 ntBASIC2.45□□□□□ -2.02
LBX1P52954 MIR767-201ENST00000390228 109 ntBASIC2.45□□□□□ -2.02
LBX1P52954 FO393413.1-201ENST00000402892 195 ntBASIC2.45□□□□□ -2.02
LBX1P52954 AL356057.2-201ENST00000403318 432 ntBASIC2.45□□□□□ -2.02
LBX1P52954 AL358075.3-201ENST00000426289 226 ntBASIC2.45□□□□□ -2.02
LBX1P52954 HMGB1P31-201ENST00000437242 427 ntBASIC2.45□□□□□ -2.02
LBX1P52954 MTCO3P18-201ENST00000440206 761 ntBASIC2.45□□□□□ -2.02
LBX1P52954 AL161651.1-201ENST00000440882 223 ntBASIC2.45□□□□□ -2.02
LBX1P52954 AC009296.1-201ENST00000443146 155 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms