Protein–RNA interactions for Protein: P51957

NEK4, Serine/threonine-protein kinase Nek4, humanhuman

Predictions only

Length 841 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P51957 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.58□□□□□ -1.84
NEK4P51957 MTCYBP10-201ENST00000424905 650 ntBASIC3.58□□□□□ -1.84
NEK4P51957 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.58□□□□□ -1.84
NEK4P51957 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.58□□□□□ -1.84
NEK4P51957 ARF4P2-201ENST00000430209 526 ntBASIC3.58□□□□□ -1.84
NEK4P51957 AL160004.2-201ENST00000432935 350 ntBASIC3.58□□□□□ -1.84
NEK4P51957 RPL39P29-201ENST00000447779 157 ntBASIC3.58□□□□□ -1.84
NEK4P51957 RN7SKP210-201ENST00000459176 261 ntBASIC3.58□□□□□ -1.84
NEK4P51957 SNORA84-201ENST00000459229 133 ntBASIC3.58□□□□□ -1.84
NEK4P51957 GZMAP1-201ENST00000503054 631 ntBASIC3.58□□□□□ -1.84
NEK4P51957 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.58□□□□□ -1.84
NEK4P51957 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NEK4P51957 MIR5680-201ENST00000577577 84 ntBASIC3.58□□□□□ -1.84
NEK4P51957 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.58□□□□□ -1.84
NEK4P51957 MIR1254-2-201ENST00000579553 63 ntBASIC3.58□□□□□ -1.84
NEK4P51957 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.58□□□□□ -1.84
NEK4P51957 MIR7112-201ENST00000616126 65 ntBASIC3.58□□□□□ -1.84
NEK4P51957 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NEK4P51957 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
NEK4P51957 AC091564.4-201ENST00000533934 2194 ntBASIC3.58□□□□□ -1.84
NEK4P51957 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NEK4P51957 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.57□□□□□ -1.84
NEK4P51957 Y_RNA.364-201ENST00000365532 101 ntBASIC3.57□□□□□ -1.84
NEK4P51957 RNU6-1286P-201ENST00000383871 107 ntBASIC3.57□□□□□ -1.84
NEK4P51957 MIR147B-201ENST00000390185 80 ntBASIC3.57□□□□□ -1.84
NEK4P51957 RNA5SP354-201ENST00000391247 136 ntBASIC3.57□□□□□ -1.84
NEK4P51957 MRPL42P3-201ENST00000401492 326 ntBASIC3.57□□□□□ -1.84
NEK4P51957 RN7SKP61-201ENST00000410642 295 ntBASIC3.57□□□□□ -1.84
NEK4P51957 RN7SKP58-201ENST00000411010 305 ntBASIC3.57□□□□□ -1.84
NEK4P51957 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.57□□□□□ -1.84
NEK4P51957 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NEK4P51957 AC009414.1-201ENST00000427200 443 ntBASIC3.57□□□□□ -1.84
NEK4P51957 AL358232.1-201ENST00000448030 501 ntBASIC3.57□□□□□ -1.84
NEK4P51957 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.57□□□□□ -1.84
NEK4P51957 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.57□□□□□ -1.84
NEK4P51957 MTND4P1-201ENST00000457501 1466 ntBASIC3.57□□□□□ -1.84
NEK4P51957 RPL30P12-201ENST00000474666 353 ntBASIC3.57□□□□□ -1.84
NEK4P51957 AC104564.1-201ENST00000493028 407 ntBASIC3.57□□□□□ -1.84
NEK4P51957 RNU6-1045P-201ENST00000516321 107 ntBASIC3.57□□□□□ -1.84
NEK4P51957 RNU4-77P-201ENST00000516692 156 ntBASIC3.57□□□□□ -1.84
NEK4P51957 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.57□□□□□ -1.84
NEK4P51957 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.57□□□□□ -1.84
NEK4P51957 AC016256.1-201ENST00000547971 354 ntBASIC3.57□□□□□ -1.84
NEK4P51957 DNAJC8P1-201ENST00000554535 372 ntBASIC3.57□□□□□ -1.84
NEK4P51957 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.57□□□□□ -1.84
NEK4P51957 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.57□□□□□ -1.84
NEK4P51957 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.57□□□□□ -1.84
NEK4P51957 AC004584.2-201ENST00000570407 410 ntBASIC3.57□□□□□ -1.84
NEK4P51957 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.57□□□□□ -1.84
NEK4P51957 RPS15AP11-201ENST00000594193 385 ntBASIC3.57□□□□□ -1.84
NEK4P51957 AC233981.2-201ENST00000611524 1614 ntBASIC3.57□□□□□ -1.84
NEK4P51957 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.56□□□□□ -1.84
NEK4P51957 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.56□□□□□ -1.84
NEK4P51957 MIR22-201ENST00000362190 85 ntBASIC3.56□□□□□ -1.84
NEK4P51957 RNU6-1285P-201ENST00000363480 105 ntBASIC3.56□□□□□ -1.84
NEK4P51957 Y_RNA.158-201ENST00000363651 101 ntBASIC3.56□□□□□ -1.84
NEK4P51957 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.56□□□□□ -1.84
NEK4P51957 Y_RNA.314-201ENST00000365114 102 ntBASIC3.56□□□□□ -1.84
NEK4P51957 RNU6-968P-201ENST00000384076 107 ntBASIC3.56□□□□□ -1.84
NEK4P51957 RNU1-101P-201ENST00000391171 127 ntBASIC3.56□□□□□ -1.84
NEK4P51957 AL133475.1-201ENST00000404414 305 ntBASIC3.56□□□□□ -1.84
NEK4P51957 MTCYBP2-201ENST00000407745 171 ntBASIC3.56□□□□□ -1.84
NEK4P51957 RNU2-23P-201ENST00000410545 195 ntBASIC3.56□□□□□ -1.84
NEK4P51957 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NEK4P51957 AC078809.1-201ENST00000427601 140 ntBASIC3.56□□□□□ -1.84
NEK4P51957 AC006028.1-201ENST00000438379 402 ntBASIC3.56□□□□□ -1.84
NEK4P51957 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.56□□□□□ -1.84
NEK4P51957 RPL23AP75-201ENST00000491601 451 ntBASIC3.56□□□□□ -1.84
NEK4P51957 RNU7-4P-201ENST00000516961 62 ntBASIC3.56□□□□□ -1.84
NEK4P51957 RNU6-1137P-201ENST00000517073 99 ntBASIC3.56□□□□□ -1.84
NEK4P51957 HSPE1P4-201ENST00000550617 308 ntBASIC3.56□□□□□ -1.84
NEK4P51957 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.56□□□□□ -1.84
NEK4P51957 AC104581.2-201ENST00000572227 430 ntBASIC3.56□□□□□ -1.84
NEK4P51957 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.56□□□□□ -1.84
NEK4P51957 AL355877.2-201ENST00000603670 358 ntBASIC3.56□□□□□ -1.84
NEK4P51957 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
NEK4P51957 AC110079.1-202ENST00000635213 138 ntBASIC3.56□□□□□ -1.84
NEK4P51957 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
NEK4P51957 AC002543.1-201ENST00000299783 1954 ntBASIC3.56□□□□□ -1.84
NEK4P51957 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
NEK4P51957 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.56□□□□□ -1.84
NEK4P51957 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NEK4P51957 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NEK4P51957 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NEK4P51957 Y_RNA.145-201ENST00000363527 102 ntBASIC3.55□□□□□ -1.84
NEK4P51957 RNU4-9P-201ENST00000364951 139 ntBASIC3.55□□□□□ -1.84
NEK4P51957 SNORA51.4-201ENST00000364993 124 ntBASIC3.55□□□□□ -1.84
NEK4P51957 RNU6-142P-201ENST00000384019 107 ntBASIC3.55□□□□□ -1.84
NEK4P51957 MIR625-201ENST00000385047 85 ntBASIC3.55□□□□□ -1.84
NEK4P51957 SNORA12.2-201ENST00000391040 156 ntBASIC3.55□□□□□ -1.84
NEK4P51957 RNU6-1140P-201ENST00000410517 106 ntBASIC3.55□□□□□ -1.84
NEK4P51957 AC007098.1-201ENST00000420122 367 ntBASIC3.55□□□□□ -1.84
NEK4P51957 AL358453.1-201ENST00000422522 250 ntBASIC3.55□□□□□ -1.84
NEK4P51957 OSTCP8-201ENST00000445117 448 ntBASIC3.55□□□□□ -1.84
NEK4P51957 RPL30P1-201ENST00000488676 339 ntBASIC3.55□□□□□ -1.84
NEK4P51957 GNAI2P1-201ENST00000541815 315 ntBASIC3.55□□□□□ -1.84
NEK4P51957 MIR5571-201ENST00000577998 113 ntBASIC3.55□□□□□ -1.84
NEK4P51957 MIR4680-201ENST00000580906 66 ntBASIC3.55□□□□□ -1.84
NEK4P51957 AC012493.2-201ENST00000595083 291 ntBASIC3.55□□□□□ -1.84
NEK4P51957 7SK.7-201ENST00000603504 247 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms