Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.56□□□□□ -2.16
CXCL12P48061 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.56□□□□□ -2.16
CXCL12P48061 AC012308.1-201ENST00000451232 178 ntBASIC1.56□□□□□ -2.16
CXCL12P48061 RPS29P15-201ENST00000458329 171 ntBASIC1.56□□□□□ -2.16
CXCL12P48061 AC055731.1-201ENST00000474387 401 ntBASIC1.56□□□□□ -2.16
CXCL12P48061 AP001025.1-201ENST00000486139 332 ntBASIC1.56□□□□□ -2.16
CXCL12P48061 SNORA43.2-201ENST00000516652 128 ntBASIC1.56□□□□□ -2.16
CXCL12P48061 RNA5SP364-201ENST00000516938 78 ntBASIC1.56□□□□□ -2.16
CXCL12P48061 SNORA31.23-201ENST00000517219 133 ntBASIC1.56□□□□□ -2.16
CXCL12P48061 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.56□□□□□ -2.16
CXCL12P48061 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.56□□□□□ -2.16
CXCL12P48061 AC008088.1-201ENST00000580993 280 ntBASIC1.56□□□□□ -2.16
CXCL12P48061 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.56□□□□□ -2.16
CXCL12P48061 AC040904.1-201ENST00000590850 223 ntBASIC1.56□□□□□ -2.16
CXCL12P48061 RNU6-6P-201ENST00000606623 107 ntBASIC1.56□□□□□ -2.16
CXCL12P48061 AC096772.1-201ENST00000609146 564 ntBASIC1.56□□□□□ -2.16
CXCL12P48061 AC005296.1-201ENST00000616145 209 ntBASIC1.56□□□□□ -2.16
CXCL12P48061 SCARNA4-202ENST00000625402 129 ntBASIC1.56□□□□□ -2.16
CXCL12P48061 MIR3529-201ENST00000637713 78 ntBASIC1.56□□□□□ -2.16
CXCL12P48061 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.56□□□□□ -2.16
CXCL12P48061 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
CXCL12P48061 RNU6-181P-201ENST00000363225 107 ntBASIC1.55□□□□□ -2.16
CXCL12P48061 RNU6-529P-201ENST00000363383 104 ntBASIC1.55□□□□□ -2.16
CXCL12P48061 RNU6-1097P-201ENST00000363586 107 ntBASIC1.55□□□□□ -2.16
CXCL12P48061 MIR186-201ENST00000384988 86 ntBASIC1.55□□□□□ -2.16
CXCL12P48061 AF228730.1-201ENST00000397972 663 ntBASIC1.55□□□□□ -2.16
CXCL12P48061 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.55□□□□□ -2.16
CXCL12P48061 RNU2-3P-201ENST00000410144 191 ntBASIC1.55□□□□□ -2.16
CXCL12P48061 RN7SKP158-201ENST00000410453 326 ntBASIC1.55□□□□□ -2.16
CXCL12P48061 CYCSP33-201ENST00000414485 327 ntBASIC1.55□□□□□ -2.16
CXCL12P48061 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.55□□□□□ -2.16
CXCL12P48061 AC133104.1-201ENST00000429100 218 ntBASIC1.55□□□□□ -2.16
CXCL12P48061 CETN4P-201ENST00000432407 469 ntBASIC1.55□□□□□ -2.16
CXCL12P48061 AL161788.1-201ENST00000441805 169 ntBASIC1.55□□□□□ -2.16
CXCL12P48061 USP9YP29-201ENST00000445112 563 ntBASIC1.55□□□□□ -2.16
CXCL12P48061 AMD1P1-201ENST00000457220 922 ntBASIC1.55□□□□□ -2.16
CXCL12P48061 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.55□□□□□ -2.16
CXCL12P48061 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.55□□□□□ -2.16
CXCL12P48061 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.55□□□□□ -2.16
CXCL12P48061 ATP5EP1-201ENST00000510257 156 ntBASIC1.55□□□□□ -2.16
CXCL12P48061 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.55□□□□□ -2.16
CXCL12P48061 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.55□□□□□ -2.16
CXCL12P48061 SNORD27.1-201ENST00000516319 72 ntBASIC1.55□□□□□ -2.16
CXCL12P48061 RNA5SP102-201ENST00000516865 106 ntBASIC1.55□□□□□ -2.16
CXCL12P48061 RNU6-445P-201ENST00000516949 107 ntBASIC1.55□□□□□ -2.16
CXCL12P48061 PSMA3P-201ENST00000555485 635 ntBASIC1.55□□□□□ -2.16
CXCL12P48061 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.55□□□□□ -2.16
CXCL12P48061 RPL30P11-203ENST00000598995 310 ntBASIC1.55□□□□□ -2.16
CXCL12P48061 AC073410.2-201ENST00000603240 332 ntBASIC1.55□□□□□ -2.16
CXCL12P48061 AL590229.1-201ENST00000603497 542 ntBASIC1.55□□□□□ -2.16
CXCL12P48061 Z99497.2-201ENST00000603634 310 ntBASIC1.55□□□□□ -2.16
CXCL12P48061 AC006566.1-201ENST00000608943 513 ntBASIC1.55□□□□□ -2.16
CXCL12P48061 AC026585.1-201ENST00000619582 524 ntBASIC1.55□□□□□ -2.16
CXCL12P48061 MTND5P35-201ENST00000557537 1720 ntBASIC1.54□□□□□ -2.16
CXCL12P48061 OR4G2P-201ENST00000328113 903 ntBASIC1.54□□□□□ -2.16
CXCL12P48061 RNU6-1010P-201ENST00000362757 107 ntBASIC1.54□□□□□ -2.16
CXCL12P48061 RNU6-715P-201ENST00000365204 103 ntBASIC1.54□□□□□ -2.16
CXCL12P48061 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CXCL12P48061 RNU6-1029P-201ENST00000384109 107 ntBASIC1.54□□□□□ -2.16
CXCL12P48061 RNU6-622P-201ENST00000384272 103 ntBASIC1.54□□□□□ -2.16
CXCL12P48061 RNU6-348P-201ENST00000384386 107 ntBASIC1.54□□□□□ -2.16
CXCL12P48061 RNU6-45P-201ENST00000384471 107 ntBASIC1.54□□□□□ -2.16
CXCL12P48061 RPL21P1-201ENST00000399532 476 ntBASIC1.54□□□□□ -2.16
CXCL12P48061 AL591034.2-201ENST00000402839 359 ntBASIC1.54□□□□□ -2.16
CXCL12P48061 SUMO2P12-201ENST00000405924 140 ntBASIC1.54□□□□□ -2.16
CXCL12P48061 RNU6-607P-201ENST00000411283 108 ntBASIC1.54□□□□□ -2.16
CXCL12P48061 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.54□□□□□ -2.16
CXCL12P48061 AC074117.2-201ENST00000417130 397 ntBASIC1.54□□□□□ -2.16
CXCL12P48061 PIGFP2-201ENST00000421400 651 ntBASIC1.54□□□□□ -2.16
CXCL12P48061 HMGN2P19-201ENST00000425149 265 ntBASIC1.54□□□□□ -2.16
CXCL12P48061 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.54□□□□□ -2.16
CXCL12P48061 AL358934.1-201ENST00000432346 324 ntBASIC1.54□□□□□ -2.16
CXCL12P48061 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.54□□□□□ -2.16
CXCL12P48061 KATNBL1P3-201ENST00000443475 909 ntBASIC1.54□□□□□ -2.16
CXCL12P48061 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.54□□□□□ -2.16
CXCL12P48061 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.54□□□□□ -2.16
CXCL12P48061 MTND1P27-201ENST00000451117 902 ntBASIC1.54□□□□□ -2.16
CXCL12P48061 RNU7-182P-201ENST00000459009 62 ntBASIC1.54□□□□□ -2.16
CXCL12P48061 MTCO3P9-201ENST00000506989 781 ntBASIC1.54□□□□□ -2.16
CXCL12P48061 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.54□□□□□ -2.16
CXCL12P48061 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.54□□□□□ -2.16
CXCL12P48061 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.54□□□□□ -2.16
CXCL12P48061 RNU6-1178P-201ENST00000516674 107 ntBASIC1.54□□□□□ -2.16
CXCL12P48061 Y_RNA.695-201ENST00000516715 107 ntBASIC1.54□□□□□ -2.16
CXCL12P48061 NDUFA5P6-201ENST00000542110 379 ntBASIC1.54□□□□□ -2.16
CXCL12P48061 MIR3935-201ENST00000583472 104 ntBASIC1.54□□□□□ -2.16
CXCL12P48061 AL078603.1-201ENST00000603824 313 ntBASIC1.54□□□□□ -2.16
CXCL12P48061 AC022202.1-201ENST00000613515 211 ntBASIC1.54□□□□□ -2.16
CXCL12P48061 AL158063.1-201ENST00000615349 536 ntBASIC1.54□□□□□ -2.16
CXCL12P48061 RMST_4.1-201ENST00000616886 107 ntBASIC1.54□□□□□ -2.16
CXCL12P48061 U4atac.1-201ENST00000618345 95 ntBASIC1.54□□□□□ -2.16
CXCL12P48061 AC099842.1-201ENST00000619919 596 ntBASIC1.54□□□□□ -2.16
CXCL12P48061 AL353770.2-201ENST00000620024 78 ntBASIC1.54□□□□□ -2.16
CXCL12P48061 RMST_7.1-201ENST00000621935 268 ntBASIC1.54□□□□□ -2.16
CXCL12P48061 AC091895.1-201ENST00000624494 256 ntBASIC1.54□□□□□ -2.16
CXCL12P48061 SNORD56.1-201ENST00000362913 68 ntBASIC1.53□□□□□ -2.16
CXCL12P48061 RNU1-23P-201ENST00000363361 144 ntBASIC1.53□□□□□ -2.16
CXCL12P48061 RNU6-1303P-201ENST00000364841 107 ntBASIC1.53□□□□□ -2.16
CXCL12P48061 RNU6-487P-201ENST00000365430 104 ntBASIC1.53□□□□□ -2.16
CXCL12P48061 MIR95-201ENST00000385072 81 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms