Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AC097372.5-201ENST00000623665 376 ntBASIC1.77□□□□□ -2.13
SHMT2P34897 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.76□□□□□ -2.13
SHMT2P34897 RNU6-37P-201ENST00000362692 107 ntBASIC1.76□□□□□ -2.13
SHMT2P34897 RNU6-11P-201ENST00000364234 107 ntBASIC1.76□□□□□ -2.13
SHMT2P34897 SNORA16.1-201ENST00000364597 132 ntBASIC1.76□□□□□ -2.13
SHMT2P34897 RNU6-25P-201ENST00000383873 107 ntBASIC1.76□□□□□ -2.13
SHMT2P34897 RNU6-1-201ENST00000383898 107 ntBASIC1.76□□□□□ -2.13
SHMT2P34897 RNU6-1103P-201ENST00000384150 107 ntBASIC1.76□□□□□ -2.13
SHMT2P34897 RNU6-48P-201ENST00000384161 107 ntBASIC1.76□□□□□ -2.13
SHMT2P34897 RNU6-36P-201ENST00000384172 107 ntBASIC1.76□□□□□ -2.13
SHMT2P34897 RNU6-4P-201ENST00000384205 107 ntBASIC1.76□□□□□ -2.13
SHMT2P34897 RNU6-5P-201ENST00000384238 107 ntBASIC1.76□□□□□ -2.13
SHMT2P34897 RNU6-3P-201ENST00000384314 107 ntBASIC1.76□□□□□ -2.13
SHMT2P34897 RNU6-16P-201ENST00000384385 107 ntBASIC1.76□□□□□ -2.13
SHMT2P34897 RNU6-393P-201ENST00000384475 107 ntBASIC1.76□□□□□ -2.13
SHMT2P34897 RNU6-15P-201ENST00000384534 107 ntBASIC1.76□□□□□ -2.13
SHMT2P34897 RNU6-2-201ENST00000384627 107 ntBASIC1.76□□□□□ -2.13
SHMT2P34897 RNU6-29P-201ENST00000384637 107 ntBASIC1.76□□□□□ -2.13
SHMT2P34897 RNU6-9-201ENST00000384776 107 ntBASIC1.76□□□□□ -2.13
SHMT2P34897 RNU6-33P-201ENST00000384793 107 ntBASIC1.76□□□□□ -2.13
SHMT2P34897 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
SHMT2P34897 SNORD70.1-201ENST00000391007 85 ntBASIC1.76□□□□□ -2.13
SHMT2P34897 RNU6-903P-201ENST00000391270 109 ntBASIC1.76□□□□□ -2.13
SHMT2P34897 RNU2-29P-201ENST00000410423 189 ntBASIC1.76□□□□□ -2.13
SHMT2P34897 RNU2-48P-201ENST00000410694 191 ntBASIC1.76□□□□□ -2.13
SHMT2P34897 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.76□□□□□ -2.13
SHMT2P34897 MTCO2P19-201ENST00000427513 598 ntBASIC1.76□□□□□ -2.13
SHMT2P34897 AL451074.3-201ENST00000437709 472 ntBASIC1.76□□□□□ -2.13
SHMT2P34897 AC003989.2-201ENST00000440224 169 ntBASIC1.76□□□□□ -2.13
SHMT2P34897 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.76□□□□□ -2.13
SHMT2P34897 PRPS1P1-201ENST00000445305 876 ntBASIC1.76□□□□□ -2.13
SHMT2P34897 AL353752.1-201ENST00000454946 260 ntBASIC1.76□□□□□ -2.13
SHMT2P34897 TPT1P7-201ENST00000458300 517 ntBASIC1.76□□□□□ -2.13
SHMT2P34897 RPL31P3-201ENST00000458430 332 ntBASIC1.76□□□□□ -2.13
SHMT2P34897 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.76□□□□□ -2.13
SHMT2P34897 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.76□□□□□ -2.13
SHMT2P34897 AC079140.3-201ENST00000511111 550 ntBASIC1.76□□□□□ -2.13
SHMT2P34897 SNORA25.17-201ENST00000517184 124 ntBASIC1.76□□□□□ -2.13
SHMT2P34897 RN7SKP256-201ENST00000517201 314 ntBASIC1.76□□□□□ -2.13
SHMT2P34897 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.76□□□□□ -2.13
SHMT2P34897 NDUFA5P6-201ENST00000542110 379 ntBASIC1.76□□□□□ -2.13
SHMT2P34897 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.76□□□□□ -2.13
SHMT2P34897 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.76□□□□□ -2.13
SHMT2P34897 MIR5583-1-201ENST00000580941 59 ntBASIC1.76□□□□□ -2.13
SHMT2P34897 MTATP6P3-201ENST00000581686 676 ntBASIC1.76□□□□□ -2.13
SHMT2P34897 AC091135.1-201ENST00000585943 307 ntBASIC1.76□□□□□ -2.13
SHMT2P34897 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.76□□□□□ -2.13
SHMT2P34897 AC073648.5-201ENST00000603502 305 ntBASIC1.76□□□□□ -2.13
SHMT2P34897 ELOCP5-201ENST00000604924 333 ntBASIC1.76□□□□□ -2.13
SHMT2P34897 RNU6-6P-201ENST00000606623 107 ntBASIC1.76□□□□□ -2.13
SHMT2P34897 AC008536.2-201ENST00000607284 349 ntBASIC1.76□□□□□ -2.13
SHMT2P34897 MIR6715A-201ENST00000615929 79 ntBASIC1.76□□□□□ -2.13
SHMT2P34897 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.76□□□□□ -2.13
SHMT2P34897 AC090517.3-201ENST00000625170 141 ntBASIC1.76□□□□□ -2.13
SHMT2P34897 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.76□□□□□ -2.13
SHMT2P34897 AC090582.1-201ENST00000636321 199 ntBASIC1.76□□□□□ -2.13
SHMT2P34897 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
SHMT2P34897 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.76□□□□□ -2.13
SHMT2P34897 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.75□□□□□ -2.13
SHMT2P34897 RNU6-944P-201ENST00000364023 107 ntBASIC1.75□□□□□ -2.13
SHMT2P34897 Y_RNA.359-201ENST00000365498 102 ntBASIC1.75□□□□□ -2.13
SHMT2P34897 RNU6-434P-201ENST00000384376 107 ntBASIC1.75□□□□□ -2.13
SHMT2P34897 MIR9-3-201ENST00000385084 90 ntBASIC1.75□□□□□ -2.13
SHMT2P34897 SNORD56-201ENST00000413522 71 ntBASIC1.75□□□□□ -2.13
SHMT2P34897 CDK8P2-201ENST00000415020 547 ntBASIC1.75□□□□□ -2.13
SHMT2P34897 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.75□□□□□ -2.13
SHMT2P34897 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.75□□□□□ -2.13
SHMT2P34897 RPL7P54-201ENST00000438336 674 ntBASIC1.75□□□□□ -2.13
SHMT2P34897 AC007677.1-201ENST00000445757 515 ntBASIC1.75□□□□□ -2.13
SHMT2P34897 AL360221.1-201ENST00000445989 335 ntBASIC1.75□□□□□ -2.13
SHMT2P34897 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.75□□□□□ -2.13
SHMT2P34897 SCARNA18-201ENST00000459004 134 ntBASIC1.75□□□□□ -2.13
SHMT2P34897 AC104564.1-201ENST00000493028 407 ntBASIC1.75□□□□□ -2.13
SHMT2P34897 AC079382.1-201ENST00000493346 557 ntBASIC1.75□□□□□ -2.13
SHMT2P34897 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.75□□□□□ -2.13
SHMT2P34897 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.75□□□□□ -2.13
SHMT2P34897 AC117532.1-201ENST00000514638 323 ntBASIC1.75□□□□□ -2.13
SHMT2P34897 AC105417.1-201ENST00000514691 285 ntBASIC1.75□□□□□ -2.13
SHMT2P34897 RNU2-19P-201ENST00000517288 84 ntBASIC1.75□□□□□ -2.13
SHMT2P34897 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.75□□□□□ -2.13
SHMT2P34897 AK6P1-201ENST00000540219 478 ntBASIC1.75□□□□□ -2.13
SHMT2P34897 AC006362.1-201ENST00000567392 174 ntBASIC1.75□□□□□ -2.13
SHMT2P34897 AGGF1P4-201ENST00000568249 801 ntBASIC1.75□□□□□ -2.13
SHMT2P34897 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.75□□□□□ -2.13
SHMT2P34897 AC002044.1-201ENST00000606707 158 ntBASIC1.75□□□□□ -2.13
SHMT2P34897 Z82243.1-201ENST00000609432 473 ntBASIC1.75□□□□□ -2.13
SHMT2P34897 MIR7843-201ENST00000622274 79 ntBASIC1.75□□□□□ -2.13
SHMT2P34897 AC007792.1-201ENST00000623023 402 ntBASIC1.75□□□□□ -2.13
SHMT2P34897 AC005609.4-201ENST00000625071 447 ntBASIC1.75□□□□□ -2.13
SHMT2P34897 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.75□□□□□ -2.13
SHMT2P34897 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
SHMT2P34897 RNU6-266P-201ENST00000364225 107 ntBASIC1.74□□□□□ -2.13
SHMT2P34897 SNORD48-201ENST00000364953 64 ntBASIC1.74□□□□□ -2.13
SHMT2P34897 RNU5A-6P-201ENST00000384136 116 ntBASIC1.74□□□□□ -2.13
SHMT2P34897 Y_RNA.480-201ENST00000384364 102 ntBASIC1.74□□□□□ -2.13
SHMT2P34897 HMGN2P39-201ENST00000398005 273 ntBASIC1.74□□□□□ -2.13
SHMT2P34897 AL512604.1-201ENST00000404812 257 ntBASIC1.74□□□□□ -2.13
SHMT2P34897 MIR1294-201ENST00000408503 142 ntBASIC1.74□□□□□ -2.13
SHMT2P34897 AC073464.1-201ENST00000429823 534 ntBASIC1.74□□□□□ -2.13
SHMT2P34897 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms