Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 AC060788.1-201ENST00000521318 469 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.23□□□□□ -2.21
COL5A3P25940 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.23□□□□□ -2.21
COL5A3P25940 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 AL391840.1-201ENST00000571144 367 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 PIGPP4-201ENST00000584447 307 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 AC092354.1-201ENST00000606057 376 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 AC073114.1-201ENST00000612027 490 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 AC004223.4-201ENST00000612426 332 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.23□□□□□ -2.21
COL5A3P25940 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 AC092140.2-201ENST00000618027 521 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 AC009509.4-201ENST00000619202 509 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
COL5A3P25940 RNU6-511P-201ENST00000363496 107 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 RNA5SP240-201ENST00000365355 128 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 RNU6-716P-201ENST00000365621 103 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 SNORA20.2-201ENST00000383922 131 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 AL359634.1-202ENST00000404721 284 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 AL512604.1-201ENST00000404812 257 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 AL356432.1-201ENST00000405809 419 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 BTF3L4P3-201ENST00000418879 476 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 GPM6BP2-201ENST00000432046 144 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 RPL23AP30-201ENST00000432419 501 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.23□□□□□ -2.21
COL5A3P25940 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.23□□□□□ -2.21
COL5A3P25940 GPM6BP1-201ENST00000446387 144 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 MTATP6P7-201ENST00000453315 681 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 AL122001.1-201ENST00000457027 370 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 RPL31P3-201ENST00000458430 332 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 RPL31P58-201ENST00000469001 379 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 RPL39P36-201ENST00000490784 156 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 AC114801.2-201ENST00000503825 781 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 AP006587.4-201ENST00000526053 529 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 AC011979.2-201ENST00000527568 352 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 AP002963.1-201ENST00000530590 184 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.23□□□□□ -2.21
COL5A3P25940 AL356057.1-201ENST00000533798 831 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 ADI1P3-201ENST00000549509 470 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 AL356432.3-201ENST00000568952 465 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 AC105245.1-201ENST00000581934 244 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.23□□□□□ -2.21
COL5A3P25940 MIR15A-201ENST00000607334 83 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 MIR7157-201ENST00000635801 60 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 RNU5E-1-201ENST00000362477 120 ntBASIC1.22□□□□□ -2.21
COL5A3P25940 RNU6-1167P-201ENST00000363227 94 ntBASIC1.22□□□□□ -2.21
COL5A3P25940 RNU6-108P-201ENST00000365558 107 ntBASIC1.22□□□□□ -2.21
COL5A3P25940 RNU6-297P-201ENST00000384636 107 ntBASIC1.22□□□□□ -2.21
COL5A3P25940 MIR558-201ENST00000384920 94 ntBASIC1.22□□□□□ -2.21
COL5A3P25940 RNU2-33P-201ENST00000410344 192 ntBASIC1.22□□□□□ -2.21
COL5A3P25940 RN7SKP142-201ENST00000411236 328 ntBASIC1.22□□□□□ -2.21
COL5A3P25940 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.22□□□□□ -2.21
COL5A3P25940 MTCO2P34-201ENST00000421994 607 ntBASIC1.22□□□□□ -2.21
COL5A3P25940 ISCA1P1-201ENST00000426679 387 ntBASIC1.22□□□□□ -2.21
COL5A3P25940 AC093106.2-201ENST00000428212 385 ntBASIC1.22□□□□□ -2.21
COL5A3P25940 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.22□□□□□ -2.21
COL5A3P25940 AL591212.2-201ENST00000433923 257 ntBASIC1.22□□□□□ -2.21
COL5A3P25940 AC104850.1-201ENST00000435940 476 ntBASIC1.22□□□□□ -2.21
COL5A3P25940 RPS15AP5-201ENST00000436276 388 ntBASIC1.22□□□□□ -2.21
COL5A3P25940 MTCO2P16-201ENST00000436962 677 ntBASIC1.22□□□□□ -2.21
COL5A3P25940 NEFMP1-201ENST00000443423 1006 ntBASIC1.22□□□□□ -2.21
COL5A3P25940 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.22□□□□□ -2.21
COL5A3P25940 MTND1P27-201ENST00000451117 902 ntBASIC1.22□□□□□ -2.21
COL5A3P25940 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.22□□□□□ -2.21
COL5A3P25940 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.22□□□□□ -2.21
COL5A3P25940 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.22□□□□□ -2.21
COL5A3P25940 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.22□□□□□ -2.21
COL5A3P25940 AC117522.1-201ENST00000509821 380 ntBASIC1.22□□□□□ -2.21
COL5A3P25940 MTCO3P28-201ENST00000513351 515 ntBASIC1.22□□□□□ -2.21
COL5A3P25940 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.22□□□□□ -2.21
COL5A3P25940 RNU7-51P-201ENST00000516560 62 ntBASIC1.22□□□□□ -2.21
COL5A3P25940 Y_RNA.695-201ENST00000516715 107 ntBASIC1.22□□□□□ -2.21
COL5A3P25940 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.22□□□□□ -2.21
COL5A3P25940 AL359212.1-201ENST00000556608 614 ntBASIC1.22□□□□□ -2.21
COL5A3P25940 AL358072.1-201ENST00000604156 575 ntBASIC1.22□□□□□ -2.21
COL5A3P25940 AP000860.1-201ENST00000605250 559 ntBASIC1.22□□□□□ -2.21
COL5A3P25940 AC211469.2-201ENST00000605461 205 ntBASIC1.22□□□□□ -2.21
COL5A3P25940 AC022893.3-201ENST00000607665 437 ntBASIC1.22□□□□□ -2.21
COL5A3P25940 AL359547.2-201ENST00000615810 418 ntBASIC1.22□□□□□ -2.21
COL5A3P25940 AC011155.2-201ENST00000623202 216 ntBASIC1.22□□□□□ -2.21
COL5A3P25940 AC124864.2-201ENST00000624736 186 ntBASIC1.22□□□□□ -2.21
COL5A3P25940 AC110491.1-201ENST00000562191 2010 ntBASIC1.22□□□□□ -2.21
COL5A3P25940 AC080100.1-201ENST00000624239 5356 ntBASIC1.22□□□□□ -2.21
COL5A3P25940 NACAP2-201ENST00000318548 624 ntBASIC1.21□□□□□ -2.22
COL5A3P25940 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
COL5A3P25940 Y_RNA.51-201ENST00000362725 102 ntBASIC1.21□□□□□ -2.22
COL5A3P25940 RNU6-169P-201ENST00000365336 107 ntBASIC1.21□□□□□ -2.22
COL5A3P25940 RNU6-61P-201ENST00000365528 109 ntBASIC1.21□□□□□ -2.22
COL5A3P25940 VTRNA1-3-201ENST00000365645 89 ntBASIC1.21□□□□□ -2.22
COL5A3P25940 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
COL5A3P25940 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
COL5A3P25940 RNU2-66P-201ENST00000410650 161 ntBASIC1.21□□□□□ -2.22
COL5A3P25940 AC096649.2-201ENST00000416186 393 ntBASIC1.21□□□□□ -2.22
COL5A3P25940 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.21□□□□□ -2.22
COL5A3P25940 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.21□□□□□ -2.22
COL5A3P25940 GTF2IP20-201ENST00000431663 360 ntBASIC1.21□□□□□ -2.22
COL5A3P25940 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.21□□□□□ -2.22
COL5A3P25940 AL031667.1-201ENST00000440222 725 ntBASIC1.21□□□□□ -2.22
COL5A3P25940 AC098831.1-201ENST00000440661 216 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms