Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.45□□□□□ -2.02
BDNFP23560 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.45□□□□□ -2.02
BDNFP23560 RPS15AP28-201ENST00000435088 386 ntBASIC2.45□□□□□ -2.02
BDNFP23560 AC079804.2-201ENST00000490376 200 ntBASIC2.45□□□□□ -2.02
BDNFP23560 AC093259.1-201ENST00000509755 300 ntBASIC2.45□□□□□ -2.02
BDNFP23560 OR11H5P-201ENST00000554039 926 ntBASIC2.45□□□□□ -2.02
BDNFP23560 AC241585.2-209ENST00000638217 143 ntBASIC2.45□□□□□ -2.02
BDNFP23560 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
BDNFP23560 U8.8-201ENST00000365399 135 ntBASIC2.44□□□□□ -2.02
BDNFP23560 RNU6-160P-201ENST00000384591 107 ntBASIC2.44□□□□□ -2.02
BDNFP23560 AL590135.1-201ENST00000422215 156 ntBASIC2.44□□□□□ -2.02
BDNFP23560 EIF4EP2-201ENST00000422816 654 ntBASIC2.44□□□□□ -2.02
BDNFP23560 AC019205.3-201ENST00000424573 156 ntBASIC2.44□□□□□ -2.02
BDNFP23560 HMGN2P19-201ENST00000425149 265 ntBASIC2.44□□□□□ -2.02
BDNFP23560 AL031667.1-201ENST00000440222 725 ntBASIC2.44□□□□□ -2.02
BDNFP23560 AC016700.2-201ENST00000446011 156 ntBASIC2.44□□□□□ -2.02
BDNFP23560 AL163973.1-201ENST00000484753 577 ntBASIC2.44□□□□□ -2.02
BDNFP23560 AC015911.1-201ENST00000495111 156 ntBASIC2.44□□□□□ -2.02
BDNFP23560 AC145146.1-201ENST00000496370 254 ntBASIC2.44□□□□□ -2.02
BDNFP23560 HSPE1P4-201ENST00000550617 308 ntBASIC2.44□□□□□ -2.02
BDNFP23560 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.44□□□□□ -2.02
BDNFP23560 AC009063.1-201ENST00000563342 702 ntBASIC2.44□□□□□ -2.02
BDNFP23560 MIR3923-201ENST00000579521 83 ntBASIC2.44□□□□□ -2.02
BDNFP23560 MTATP6P3-201ENST00000581686 676 ntBASIC2.44□□□□□ -2.02
BDNFP23560 MIR5007-201ENST00000583098 95 ntBASIC2.44□□□□□ -2.02
BDNFP23560 AC009314.1-201ENST00000603871 304 ntBASIC2.44□□□□□ -2.02
BDNFP23560 AC123912.5-201ENST00000605470 343 ntBASIC2.44□□□□□ -2.02
BDNFP23560 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.44□□□□□ -2.02
BDNFP23560 AL137847.3-201ENST00000611521 109 ntBASIC2.44□□□□□ -2.02
BDNFP23560 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.44□□□□□ -2.02
BDNFP23560 uc_338.34-201ENST00000617467 174 ntBASIC2.44□□□□□ -2.02
BDNFP23560 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
BDNFP23560 RNU6-428P-201ENST00000362942 107 ntBASIC2.43□□□□□ -2.02
BDNFP23560 SNORA75-201ENST00000384158 137 ntBASIC2.43□□□□□ -2.02
BDNFP23560 Y_RNA.553-201ENST00000384670 102 ntBASIC2.43□□□□□ -2.02
BDNFP23560 AL606923.1-201ENST00000406616 190 ntBASIC2.43□□□□□ -2.02
BDNFP23560 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.43□□□□□ -2.02
BDNFP23560 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.43□□□□□ -2.02
BDNFP23560 UBE2V1P4-201ENST00000425374 344 ntBASIC2.43□□□□□ -2.02
BDNFP23560 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.43□□□□□ -2.02
BDNFP23560 AC018634.1-201ENST00000437554 401 ntBASIC2.43□□□□□ -2.02
BDNFP23560 AC107222.1-201ENST00000510899 637 ntBASIC2.43□□□□□ -2.02
BDNFP23560 AC005741.1-201ENST00000511094 432 ntBASIC2.43□□□□□ -2.02
BDNFP23560 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.43□□□□□ -2.02
BDNFP23560 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.43□□□□□ -2.02
BDNFP23560 AC060766.3-201ENST00000591442 263 ntBASIC2.43□□□□□ -2.02
BDNFP23560 AC008749.1-201ENST00000597650 306 ntBASIC2.43□□□□□ -2.02
BDNFP23560 AC007684.1-201ENST00000609671 477 ntBASIC2.43□□□□□ -2.02
BDNFP23560 AC130454.1-201ENST00000622948 401 ntBASIC2.43□□□□□ -2.02
BDNFP23560 MTND5P6-201ENST00000422338 1798 ntBASIC2.43□□□□□ -2.02
BDNFP23560 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
BDNFP23560 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
BDNFP23560 Y_RNA.159-201ENST00000363674 87 ntBASIC2.42□□□□□ -2.02
BDNFP23560 RNU6-827P-201ENST00000365553 106 ntBASIC2.42□□□□□ -2.02
BDNFP23560 RNU6-26P-201ENST00000383985 107 ntBASIC2.42□□□□□ -2.02
BDNFP23560 SNORA70B-201ENST00000384210 135 ntBASIC2.42□□□□□ -2.02
BDNFP23560 RNU6-692P-201ENST00000384496 107 ntBASIC2.42□□□□□ -2.02
BDNFP23560 SNORA8-201ENST00000384574 139 ntBASIC2.42□□□□□ -2.02
BDNFP23560 MIR676-201ENST00000390702 67 ntBASIC2.42□□□□□ -2.02
BDNFP23560 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.42□□□□□ -2.02
BDNFP23560 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.42□□□□□ -2.02
BDNFP23560 OOSP1P1-201ENST00000423265 274 ntBASIC2.42□□□□□ -2.02
BDNFP23560 HMGN2P38-201ENST00000423806 265 ntBASIC2.42□□□□□ -2.02
BDNFP23560 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.42□□□□□ -2.02
BDNFP23560 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.42□□□□□ -2.02
BDNFP23560 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.42□□□□□ -2.02
BDNFP23560 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.42□□□□□ -2.02
BDNFP23560 AC009646.1-201ENST00000510455 318 ntBASIC2.42□□□□□ -2.02
BDNFP23560 RNU1-41P-201ENST00000516161 162 ntBASIC2.42□□□□□ -2.02
BDNFP23560 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.42□□□□□ -2.02
BDNFP23560 RNU1-48P-201ENST00000516400 162 ntBASIC2.42□□□□□ -2.02
BDNFP23560 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.42□□□□□ -2.02
BDNFP23560 AP003034.1-201ENST00000534621 422 ntBASIC2.42□□□□□ -2.02
BDNFP23560 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.42□□□□□ -2.02
BDNFP23560 BNIP3P25-201ENST00000596023 559 ntBASIC2.42□□□□□ -2.02
BDNFP23560 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.42□□□□□ -2.02
BDNFP23560 RPL17P51-201ENST00000605218 238 ntBASIC2.42□□□□□ -2.02
BDNFP23560 RMST_6.1-201ENST00000611980 203 ntBASIC2.42□□□□□ -2.02
BDNFP23560 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
BDNFP23560 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
BDNFP23560 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
BDNFP23560 Y_RNA.1-201ENST00000352915 104 ntBASIC2.41□□□□□ -2.02
BDNFP23560 U8.2-201ENST00000363156 134 ntBASIC2.41□□□□□ -2.02
BDNFP23560 RNA5SP425-201ENST00000410336 112 ntBASIC2.41□□□□□ -2.02
BDNFP23560 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.41□□□□□ -2.02
BDNFP23560 MTCO2P34-201ENST00000421994 607 ntBASIC2.41□□□□□ -2.02
BDNFP23560 BX510359.4-201ENST00000423750 193 ntBASIC2.41□□□□□ -2.02
BDNFP23560 AL133396.1-201ENST00000432048 687 ntBASIC2.41□□□□□ -2.02
BDNFP23560 SNAP23P1-201ENST00000433229 246 ntBASIC2.41□□□□□ -2.02
BDNFP23560 HMGN2P3-201ENST00000433603 273 ntBASIC2.41□□□□□ -2.02
BDNFP23560 HMGN2P5-201ENST00000436882 273 ntBASIC2.41□□□□□ -2.02
BDNFP23560 AL451074.3-201ENST00000437709 472 ntBASIC2.41□□□□□ -2.02
BDNFP23560 AL121601.2-201ENST00000438019 707 ntBASIC2.41□□□□□ -2.02
BDNFP23560 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.41□□□□□ -2.02
BDNFP23560 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.41□□□□□ -2.02
BDNFP23560 MTCO2P18-201ENST00000457151 658 ntBASIC2.41□□□□□ -2.02
BDNFP23560 AC010424.1-201ENST00000506336 297 ntBASIC2.41□□□□□ -2.02
BDNFP23560 AC021231.3-201ENST00000558497 370 ntBASIC2.41□□□□□ -2.02
BDNFP23560 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
BDNFP23560 AL354950.2-201ENST00000617939 290 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms