Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC087854.1-201ENST00000519706 414 ntBASIC2.41□□□□□ -2.02
CDH3P22223 PSMA3P-201ENST00000555485 635 ntBASIC2.41□□□□□ -2.02
CDH3P22223 MIR5092-201ENST00000583139 88 ntBASIC2.41□□□□□ -2.02
CDH3P22223 AC018638.8-201ENST00000588755 281 ntBASIC2.41□□□□□ -2.02
CDH3P22223 AC021646.1-201ENST00000605469 484 ntBASIC2.41□□□□□ -2.02
CDH3P22223 AL121917.1-203ENST00000605534 577 ntBASIC2.41□□□□□ -2.02
CDH3P22223 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.41□□□□□ -2.02
CDH3P22223 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.41□□□□□ -2.02
CDH3P22223 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.41□□□□□ -2.02
CDH3P22223 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.41□□□□□ -2.02
CDH3P22223 MIR7157-201ENST00000635801 60 ntBASIC2.41□□□□□ -2.02
CDH3P22223 MIR3529-201ENST00000637713 78 ntBASIC2.41□□□□□ -2.02
CDH3P22223 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.41□□□□□ -2.02
CDH3P22223 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.4□□□□□ -2.02
CDH3P22223 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.02
CDH3P22223 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.4□□□□□ -2.02
CDH3P22223 HAUS6P2-201ENST00000433254 2404 ntBASIC2.4□□□□□ -2.02
CDH3P22223 AC005336.3-201ENST00000623833 2679 ntBASIC2.4□□□□□ -2.02
CDH3P22223 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.4□□□□□ -2.02
CDH3P22223 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.4□□□□□ -2.03
CDH3P22223 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
CDH3P22223 SNORD113-7-201ENST00000363762 77 ntBASIC2.4□□□□□ -2.03
CDH3P22223 RNU6-105P-201ENST00000363909 104 ntBASIC2.4□□□□□ -2.03
CDH3P22223 RNU6-336P-201ENST00000364891 107 ntBASIC2.4□□□□□ -2.03
CDH3P22223 U8.8-201ENST00000365399 135 ntBASIC2.4□□□□□ -2.03
CDH3P22223 RNU6-487P-201ENST00000365430 104 ntBASIC2.4□□□□□ -2.03
CDH3P22223 RNU6-827P-201ENST00000365553 106 ntBASIC2.4□□□□□ -2.03
CDH3P22223 Y_RNA.414-201ENST00000384011 101 ntBASIC2.4□□□□□ -2.03
CDH3P22223 RNU6-622P-201ENST00000384272 103 ntBASIC2.4□□□□□ -2.03
CDH3P22223 AL445529.1-201ENST00000398713 389 ntBASIC2.4□□□□□ -2.03
CDH3P22223 MIR450B-201ENST00000401182 78 ntBASIC2.4□□□□□ -2.03
CDH3P22223 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.4□□□□□ -2.03
CDH3P22223 Z98742.2-201ENST00000431564 187 ntBASIC2.4□□□□□ -2.03
CDH3P22223 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.4□□□□□ -2.03
CDH3P22223 MTCO2P30-201ENST00000503662 364 ntBASIC2.4□□□□□ -2.03
CDH3P22223 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.4□□□□□ -2.03
CDH3P22223 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.4□□□□□ -2.03
CDH3P22223 AL117351.2-201ENST00000513571 157 ntBASIC2.4□□□□□ -2.03
CDH3P22223 RNU6-377P-201ENST00000515965 102 ntBASIC2.4□□□□□ -2.03
CDH3P22223 AP005902.1-201ENST00000521358 186 ntBASIC2.4□□□□□ -2.03
CDH3P22223 SNORD14A-201ENST00000606526 91 ntBASIC2.4□□□□□ -2.03
CDH3P22223 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CDH3P22223 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.4□□□□□ -2.03
CDH3P22223 AC097372.5-201ENST00000623665 376 ntBASIC2.4□□□□□ -2.03
CDH3P22223 CTSLP2-204ENST00000629029 392 ntBASIC2.4□□□□□ -2.03
CDH3P22223 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.4□□□□□ -2.03
CDH3P22223 AP006437.1-201ENST00000641440 3685 ntBASIC2.4□□□□□ -2.03
CDH3P22223 CASC19-280ENST00000642102 1351 ntBASIC2.39□□□□□ -2.03
CDH3P22223 SNORD56.1-201ENST00000362913 68 ntBASIC2.39□□□□□ -2.03
CDH3P22223 Y_RNA.390-201ENST00000383932 102 ntBASIC2.39□□□□□ -2.03
CDH3P22223 FGF7P8-201ENST00000402994 292 ntBASIC2.39□□□□□ -2.03
CDH3P22223 MICF-203ENST00000432679 129 ntBASIC2.39□□□□□ -2.03
CDH3P22223 MTCO3P18-201ENST00000440206 761 ntBASIC2.39□□□□□ -2.03
CDH3P22223 AC007969.2-201ENST00000441891 191 ntBASIC2.39□□□□□ -2.03
CDH3P22223 AL359672.1-201ENST00000442302 409 ntBASIC2.39□□□□□ -2.03
CDH3P22223 AL441985.1-201ENST00000457727 251 ntBASIC2.39□□□□□ -2.03
CDH3P22223 RPL23AP49-201ENST00000492925 468 ntBASIC2.39□□□□□ -2.03
CDH3P22223 AC008628.2-201ENST00000502605 298 ntBASIC2.39□□□□□ -2.03
CDH3P22223 AC018710.1-201ENST00000506509 158 ntBASIC2.39□□□□□ -2.03
CDH3P22223 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.39□□□□□ -2.03
CDH3P22223 AC107953.1-201ENST00000522216 297 ntBASIC2.39□□□□□ -2.03
CDH3P22223 AC103996.1-201ENST00000555468 102 ntBASIC2.39□□□□□ -2.03
CDH3P22223 AC007336.1-201ENST00000576365 3828 ntBASIC2.39□□□□□ -2.03
CDH3P22223 MIR4801-201ENST00000582704 82 ntBASIC2.39□□□□□ -2.03
CDH3P22223 MIR3942-201ENST00000585264 109 ntBASIC2.39□□□□□ -2.03
CDH3P22223 ELOCP5-201ENST00000604924 333 ntBASIC2.39□□□□□ -2.03
CDH3P22223 RBM11P1-201ENST00000604951 799 ntBASIC2.39□□□□□ -2.03
CDH3P22223 BNIP3P10-201ENST00000605360 577 ntBASIC2.39□□□□□ -2.03
CDH3P22223 RNU6-91P-201ENST00000607774 107 ntBASIC2.39□□□□□ -2.03
CDH3P22223 AC064836.2-201ENST00000609491 462 ntBASIC2.39□□□□□ -2.03
CDH3P22223 AC012640.5-201ENST00000623897 319 ntBASIC2.39□□□□□ -2.03
CDH3P22223 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CDH3P22223 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CDH3P22223 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CDH3P22223 RNU6-831P-201ENST00000384548 107 ntBASIC2.38□□□□□ -2.03
CDH3P22223 MIR518C-201ENST00000384822 101 ntBASIC2.38□□□□□ -2.03
CDH3P22223 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CDH3P22223 RPS29P13-201ENST00000402041 169 ntBASIC2.38□□□□□ -2.03
CDH3P22223 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.38□□□□□ -2.03
CDH3P22223 AC009161.1-201ENST00000417306 376 ntBASIC2.38□□□□□ -2.03
CDH3P22223 FABP5P14-201ENST00000437273 393 ntBASIC2.38□□□□□ -2.03
CDH3P22223 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CDH3P22223 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.38□□□□□ -2.03
CDH3P22223 RPL31P58-201ENST00000469001 379 ntBASIC2.38□□□□□ -2.03
CDH3P22223 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.38□□□□□ -2.03
CDH3P22223 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.38□□□□□ -2.03
CDH3P22223 RNU6-1332P-201ENST00000516666 104 ntBASIC2.38□□□□□ -2.03
CDH3P22223 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.38□□□□□ -2.03
CDH3P22223 AC104576.1-201ENST00000524225 88 ntBASIC2.38□□□□□ -2.03
CDH3P22223 AC087241.2-201ENST00000535801 324 ntBASIC2.38□□□□□ -2.03
CDH3P22223 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.38□□□□□ -2.03
CDH3P22223 RPS3AP23-202ENST00000574601 686 ntBASIC2.38□□□□□ -2.03
CDH3P22223 MIR5694-201ENST00000581190 76 ntBASIC2.38□□□□□ -2.03
CDH3P22223 MIR6840-201ENST00000611937 71 ntBASIC2.38□□□□□ -2.03
CDH3P22223 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
CDH3P22223 AL359854.1-201ENST00000614203 1594 ntBASIC2.38□□□□□ -2.03
CDH3P22223 DUXAP9-208ENST00000622815 614 ntBASIC2.38□□□□□ -2.03
CDH3P22223 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
CDH3P22223 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CDH3P22223 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 168.1 ms