Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC099654.7-201ENST00000635788 2127 ntBASIC1.48□□□□□ -2.17
COL5A1P20908 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
COL5A1P20908 Y_RNA.157-201ENST00000363638 102 ntBASIC1.48□□□□□ -2.17
COL5A1P20908 RNU6-188P-201ENST00000364207 107 ntBASIC1.48□□□□□ -2.17
COL5A1P20908 Y_RNA.576-201ENST00000384781 102 ntBASIC1.48□□□□□ -2.17
COL5A1P20908 AL606923.1-201ENST00000406616 190 ntBASIC1.48□□□□□ -2.17
COL5A1P20908 RNU6-387P-201ENST00000411331 105 ntBASIC1.48□□□□□ -2.17
COL5A1P20908 AC138393.2-201ENST00000414742 246 ntBASIC1.48□□□□□ -2.17
COL5A1P20908 Z85995.1-201ENST00000415547 335 ntBASIC1.48□□□□□ -2.17
COL5A1P20908 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.48□□□□□ -2.17
COL5A1P20908 AL596276.1-201ENST00000434465 418 ntBASIC1.48□□□□□ -2.17
COL5A1P20908 MTATP6P16-201ENST00000434543 526 ntBASIC1.48□□□□□ -2.17
COL5A1P20908 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.48□□□□□ -2.17
COL5A1P20908 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.48□□□□□ -2.17
COL5A1P20908 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.48□□□□□ -2.17
COL5A1P20908 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.48□□□□□ -2.17
COL5A1P20908 EIF4EP3-201ENST00000498782 656 ntBASIC1.48□□□□□ -2.17
COL5A1P20908 AC046134.1-201ENST00000514454 666 ntBASIC1.48□□□□□ -2.17
COL5A1P20908 Y_RNA.693-201ENST00000516641 110 ntBASIC1.48□□□□□ -2.17
COL5A1P20908 RNU6-1282P-201ENST00000516735 96 ntBASIC1.48□□□□□ -2.17
COL5A1P20908 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.48□□□□□ -2.17
COL5A1P20908 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.48□□□□□ -2.17
COL5A1P20908 AL138976.2-201ENST00000563989 694 ntBASIC1.48□□□□□ -2.17
COL5A1P20908 AP001330.4-201ENST00000604350 154 ntBASIC1.48□□□□□ -2.17
COL5A1P20908 SDR42E1P2-201ENST00000614861 481 ntBASIC1.48□□□□□ -2.17
COL5A1P20908 AL353770.2-201ENST00000620024 78 ntBASIC1.48□□□□□ -2.17
COL5A1P20908 AL360181.4-201ENST00000621752 134 ntBASIC1.48□□□□□ -2.17
COL5A1P20908 ZNF680P1-201ENST00000436625 1469 ntBASIC1.48□□□□□ -2.17
COL5A1P20908 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.48□□□□□ -2.17
COL5A1P20908 RNU6-845P-201ENST00000362578 103 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
COL5A1P20908 SNORA69-201ENST00000383895 132 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 RNU6-510P-201ENST00000391239 108 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 RNA5SP118-201ENST00000410385 109 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 EEF1A1P40-201ENST00000412883 573 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 AL109913.1-201ENST00000421173 514 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 MED13P1-201ENST00000428342 171 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 AL356867.1-201ENST00000429623 299 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.47□□□□□ -2.17
COL5A1P20908 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.47□□□□□ -2.17
COL5A1P20908 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.47□□□□□ -2.17
COL5A1P20908 AL162395.1-201ENST00000457882 422 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 GMFBP1-201ENST00000467831 427 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 AC010285.1-201ENST00000470580 392 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.47□□□□□ -2.17
COL5A1P20908 HMGN1P12-201ENST00000499125 195 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 PRDX4P1-201ENST00000507189 574 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 SNORD27.1-201ENST00000516319 72 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 RN7SKP49-201ENST00000516675 260 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 SNORA31.24-201ENST00000517232 57 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.47□□□□□ -2.17
COL5A1P20908 OR5AL2P-201ENST00000532185 920 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 AL356432.3-201ENST00000568952 465 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.47□□□□□ -2.17
COL5A1P20908 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.47□□□□□ -2.17
COL5A1P20908 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.47□□□□□ -2.17
COL5A1P20908 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.47□□□□□ -2.17
COL5A1P20908 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.47□□□□□ -2.17
COL5A1P20908 FER-210ENST00000628534 558 ntTSL 5 BASIC1.47□□□□□ -2.17
COL5A1P20908 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.47□□□□□ -2.17
COL5A1P20908 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
COL5A1P20908 AC006026.1-201ENST00000444025 1803 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 AC009812.4-201ENST00000569134 1805 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 ZNF209P-201ENST00000593450 2304 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 SNORA62.1-201ENST00000364287 154 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 RNU6-1283P-201ENST00000365314 105 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 RNU6-996P-201ENST00000365438 107 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 RNU6-74P-201ENST00000384235 107 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 Y_RNA.480-201ENST00000384364 102 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
COL5A1P20908 RNU2-29P-201ENST00000410423 189 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 RNU2-40P-201ENST00000410833 196 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 AC022028.1-201ENST00000412054 408 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 MTCYBP8-201ENST00000422855 651 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 RPL7L1P10-201ENST00000427790 463 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.47□□□□□ -2.17
COL5A1P20908 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.47□□□□□ -2.17
COL5A1P20908 AC090774.1-201ENST00000435925 246 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 MTND4LP16-201ENST00000440828 295 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 SNRPFP3-201ENST00000457792 225 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 RNU6-420P-201ENST00000458780 107 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 AL121769.1-201ENST00000469473 401 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 MTCO2P30-201ENST00000503662 364 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.47□□□□□ -2.17
COL5A1P20908 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.47□□□□□ -2.17
COL5A1P20908 RNU6-1281P-201ENST00000516223 105 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 Y_RNA.704-201ENST00000516851 102 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 MTND4P7-201ENST00000523876 130 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.47□□□□□ -2.17
COL5A1P20908 TRAV28-201ENST00000557548 323 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 AC025678.1-201ENST00000567861 338 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 MIR15A-201ENST00000607334 83 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
COL5A1P20908 AC012409.4-201ENST00000612923 249 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 AL354950.2-201ENST00000617939 290 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.47□□□□□ -2.17
COL5A1P20908 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.47□□□□□ -2.17
COL5A1P20908 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.46□□□□□ -2.17
COL5A1P20908 CENPCP1-201ENST00000533085 2578 ntBASIC1.46□□□□□ -2.18
COL5A1P20908 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms