Protein–RNA interactions for Protein: P18433

PTPRA, Receptor-type tyrosine-protein phosphatase alpha, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRAP18433 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.28□□□□□ -1.72
PTPRAP18433 AC074133.1-201ENST00000515696 183 ntBASIC4.28□□□□□ -1.72
PTPRAP18433 SNORA70.18-201ENST00000516696 98 ntBASIC4.28□□□□□ -1.72
PTPRAP18433 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PTPRAP18433 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.28□□□□□ -1.72
PTPRAP18433 AC016256.1-201ENST00000547971 354 ntBASIC4.28□□□□□ -1.72
PTPRAP18433 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPRAP18433 AC005176.2-201ENST00000596933 147 ntBASIC4.28□□□□□ -1.72
PTPRAP18433 AL357075.2-201ENST00000614906 189 ntBASIC4.28□□□□□ -1.72
PTPRAP18433 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.28□□□□□ -1.72
PTPRAP18433 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTPRAP18433 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTPRAP18433 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.28□□□□□ -1.72
PTPRAP18433 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.27□□□□□ -1.73
PTPRAP18433 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.27□□□□□ -1.73
PTPRAP18433 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.27□□□□□ -1.73
PTPRAP18433 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.27□□□□□ -1.73
PTPRAP18433 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PTPRAP18433 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PTPRAP18433 SNORA36A-201ENST00000384221 132 ntBASIC4.27□□□□□ -1.73
PTPRAP18433 AC024067.1-201ENST00000426199 223 ntBASIC4.27□□□□□ -1.73
PTPRAP18433 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.27□□□□□ -1.73
PTPRAP18433 TRAPPC2P7-201ENST00000509650 231 ntBASIC4.27□□□□□ -1.73
PTPRAP18433 RN7SKP57-201ENST00000517248 293 ntBASIC4.27□□□□□ -1.73
PTPRAP18433 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.27□□□□□ -1.73
PTPRAP18433 AC008011.1-201ENST00000545989 227 ntBASIC4.27□□□□□ -1.73
PTPRAP18433 HSPE1P4-201ENST00000550617 308 ntBASIC4.27□□□□□ -1.73
PTPRAP18433 MIR5571-201ENST00000577998 113 ntBASIC4.27□□□□□ -1.73
PTPRAP18433 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.27□□□□□ -1.73
PTPRAP18433 FTX_3.1-201ENST00000610451 147 ntBASIC4.27□□□□□ -1.73
PTPRAP18433 AC108706.1-201ENST00000611053 297 ntBASIC4.27□□□□□ -1.73
PTPRAP18433 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.27□□□□□ -1.73
PTPRAP18433 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.27□□□□□ -1.73
PTPRAP18433 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.27□□□□□ -1.73
PTPRAP18433 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
PTPRAP18433 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PTPRAP18433 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.27□□□□□ -1.73
PTPRAP18433 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.27□□□□□ -1.73
PTPRAP18433 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.27□□□□□ -1.73
PTPRAP18433 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PTPRAP18433 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PTPRAP18433 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
PTPRAP18433 RNU6-778P-201ENST00000363269 103 ntBASIC4.26□□□□□ -1.73
PTPRAP18433 RNU6-137P-201ENST00000363680 108 ntBASIC4.26□□□□□ -1.73
PTPRAP18433 SNORA7.2-201ENST00000364446 145 ntBASIC4.26□□□□□ -1.73
PTPRAP18433 MIR493-201ENST00000385254 89 ntBASIC4.26□□□□□ -1.73
PTPRAP18433 U3.19-201ENST00000390893 196 ntBASIC4.26□□□□□ -1.73
PTPRAP18433 RNU6-1197P-201ENST00000391183 107 ntBASIC4.26□□□□□ -1.73
PTPRAP18433 NDUFB4P4-201ENST00000404822 243 ntBASIC4.26□□□□□ -1.73
PTPRAP18433 AL160275.2-201ENST00000412010 394 ntBASIC4.26□□□□□ -1.73
PTPRAP18433 RPL23AP36-201ENST00000413895 458 ntBASIC4.26□□□□□ -1.73
PTPRAP18433 AC138623.1-201ENST00000418060 216 ntBASIC4.26□□□□□ -1.73
PTPRAP18433 OOSP1P1-201ENST00000423265 274 ntBASIC4.26□□□□□ -1.73
PTPRAP18433 AL512844.2-201ENST00000433990 593 ntBASIC4.26□□□□□ -1.73
PTPRAP18433 AC007969.2-201ENST00000441891 191 ntBASIC4.26□□□□□ -1.73
PTPRAP18433 GPM6BP3-201ENST00000442797 145 ntBASIC4.26□□□□□ -1.73
PTPRAP18433 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.26□□□□□ -1.73
PTPRAP18433 RPS4XP22-201ENST00000480755 780 ntBASIC4.26□□□□□ -1.73
PTPRAP18433 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.26□□□□□ -1.73
PTPRAP18433 AC055872.1-201ENST00000570978 278 ntBASIC4.26□□□□□ -1.73
PTPRAP18433 AC019159.1-201ENST00000605094 187 ntBASIC4.26□□□□□ -1.73
PTPRAP18433 AL356157.2-201ENST00000605122 111 ntBASIC4.26□□□□□ -1.73
PTPRAP18433 AL138963.2-201ENST00000605137 226 ntBASIC4.26□□□□□ -1.73
PTPRAP18433 MIR8058-201ENST00000615737 89 ntBASIC4.26□□□□□ -1.73
PTPRAP18433 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PTPRAP18433 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
PTPRAP18433 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
PTPRAP18433 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PTPRAP18433 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.26□□□□□ -1.73
PTPRAP18433 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
PTPRAP18433 IPO8P1-201ENST00000455509 3109 ntBASIC4.26□□□□□ -1.73
PTPRAP18433 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
PTPRAP18433 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.26□□□□□ -1.73
PTPRAP18433 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.25□□□□□ -1.73
PTPRAP18433 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
PTPRAP18433 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.25□□□□□ -1.73
PTPRAP18433 RBBP8P1-201ENST00000449447 1844 ntBASIC4.25□□□□□ -1.73
PTPRAP18433 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PTPRAP18433 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
PTPRAP18433 RNA5SP197-201ENST00000363357 119 ntBASIC4.25□□□□□ -1.73
PTPRAP18433 Y_RNA.217-201ENST00000364214 105 ntBASIC4.25□□□□□ -1.73
PTPRAP18433 RNU1-100P-201ENST00000365255 165 ntBASIC4.25□□□□□ -1.73
PTPRAP18433 RNU6-1279P-201ENST00000383917 103 ntBASIC4.25□□□□□ -1.73
PTPRAP18433 RNU6-217P-201ENST00000384164 104 ntBASIC4.25□□□□□ -1.73
PTPRAP18433 MIR544A-201ENST00000384855 91 ntBASIC4.25□□□□□ -1.73
PTPRAP18433 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PTPRAP18433 RNA5SP120-201ENST00000410900 112 ntBASIC4.25□□□□□ -1.73
PTPRAP18433 RNU5E-9P-201ENST00000411164 104 ntBASIC4.25□□□□□ -1.73
PTPRAP18433 AC074117.2-201ENST00000417130 397 ntBASIC4.25□□□□□ -1.73
PTPRAP18433 DBIP2-201ENST00000419076 262 ntBASIC4.25□□□□□ -1.73
PTPRAP18433 AC115115.1-201ENST00000449927 248 ntBASIC4.25□□□□□ -1.73
PTPRAP18433 snoU13.6-201ENST00000458785 104 ntBASIC4.25□□□□□ -1.73
PTPRAP18433 Y_RNA.641-201ENST00000459414 105 ntBASIC4.25□□□□□ -1.73
PTPRAP18433 RPL21P10-201ENST00000463521 490 ntBASIC4.25□□□□□ -1.73
PTPRAP18433 AC097462.2-201ENST00000504623 481 ntBASIC4.25□□□□□ -1.73
PTPRAP18433 AP005660.1-201ENST00000522972 293 ntBASIC4.25□□□□□ -1.73
PTPRAP18433 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PTPRAP18433 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.25□□□□□ -1.73
PTPRAP18433 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.25□□□□□ -1.73
PTPRAP18433 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 205.7 ms