Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC-0.77□□□□□ -2.53
VCANP13611 AC025423.5-201ENST00000550230 219 ntBASIC-0.77□□□□□ -2.53
VCANP13611 Y_RNA.421-201ENST00000384052 101 ntBASIC-0.77□□□□□ -2.53
VCANP13611 TAF9BP2-201ENST00000400856 499 ntBASIC-0.77□□□□□ -2.53
VCANP13611 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC-0.77□□□□□ -2.53
VCANP13611 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC-0.77□□□□□ -2.53
VCANP13611 CTHRC1P1-201ENST00000605383 469 ntBASIC-0.77□□□□□ -2.53
VCANP13611 AL357080.1-201ENST00000617394 239 ntBASIC-0.77□□□□□ -2.53
VCANP13611 U4atac.1-201ENST00000618345 95 ntBASIC-0.77□□□□□ -2.53
VCANP13611 AL109659.3-201ENST00000624985 950 ntBASIC-0.77□□□□□ -2.53
VCANP13611 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC-0.77□□□□□ -2.53
VCANP13611 SNORA25.7-201ENST00000364375 127 ntBASIC-0.78□□□□□ -2.53
VCANP13611 RNU6-880P-201ENST00000384526 107 ntBASIC-0.78□□□□□ -2.53
VCANP13611 CBX3P9-201ENST00000402326 552 ntBASIC-0.78□□□□□ -2.53
VCANP13611 snoU13.28-201ENST00000459235 104 ntBASIC-0.78□□□□□ -2.53
VCANP13611 AL121579.1-201ENST00000555129 305 ntBASIC-0.78□□□□□ -2.53
VCANP13611 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC-0.78□□□□□ -2.53
VCANP13611 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC-0.78□□□□□ -2.53
VCANP13611 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC-0.78□□□□□ -2.53
VCANP13611 RNU6-1335P-201ENST00000365426 107 ntBASIC-0.78□□□□□ -2.53
VCANP13611 AC242628.1-201ENST00000606810 391 ntBASIC-0.78□□□□□ -2.53
VCANP13611 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.79□□□□□ -2.54
VCANP13611 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.79□□□□□ -2.54
VCANP13611 AF213884.2-201ENST00000510417 903 ntBASIC-0.79□□□□□ -2.54
VCANP13611 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC-0.79□□□□□ -2.54
VCANP13611 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC-0.79□□□□□ -2.54
VCANP13611 MIR4306-201ENST00000583390 91 ntBASIC-0.79□□□□□ -2.54
VCANP13611 AL670379.3-201ENST00000605040 251 ntBASIC-0.79□□□□□ -2.54
VCANP13611 AL360219.1-201ENST00000610230 366 ntBASIC-0.79□□□□□ -2.54
VCANP13611 AC103705.1-201ENST00000619013 241 ntBASIC-0.79□□□□□ -2.54
VCANP13611 RNY1P8-201ENST00000383970 114 ntBASIC-0.79□□□□□ -2.54
VCANP13611 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC-0.79□□□□□ -2.54
VCANP13611 AC104332.1-201ENST00000440471 797 ntBASIC-0.79□□□□□ -2.54
VCANP13611 MTCYBP3-201ENST00000445588 1137 ntBASIC-0.79□□□□□ -2.54
VCANP13611 RPL17P19-201ENST00000489069 552 ntBASIC-0.79□□□□□ -2.54
VCANP13611 AC091959.1-201ENST00000495857 238 ntBASIC-0.79□□□□□ -2.54
VCANP13611 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.79□□□□□ -2.54
VCANP13611 SNORA31.4-201ENST00000516049 129 ntBASIC-0.79□□□□□ -2.54
VCANP13611 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-0.79□□□□□ -2.54
VCANP13611 AC023050.3-201ENST00000541142 333 ntBASIC-0.79□□□□□ -2.54
VCANP13611 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC-0.79□□□□□ -2.54
VCANP13611 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC-0.79□□□□□ -2.54
VCANP13611 MED28P6-201ENST00000558776 231 ntBASIC-0.79□□□□□ -2.54
VCANP13611 MIR5591-201ENST00000578248 65 ntBASIC-0.79□□□□□ -2.54
VCANP13611 AL590282.1-201ENST00000610379 1136 ntBASIC-0.79□□□□□ -2.54
VCANP13611 MIR6129-201ENST00000616087 109 ntBASIC-0.79□□□□□ -2.54
VCANP13611 AC008993.2-201ENST00000631744 806 ntBASIC-0.79□□□□□ -2.54
VCANP13611 AL359854.1-201ENST00000614203 1594 ntBASIC-0.79□□□□□ -2.54
VCANP13611 RNU6-439P-201ENST00000384188 106 ntBASIC-0.79□□□□□ -2.54
VCANP13611 RAP1BP3-201ENST00000407180 549 ntBASIC-0.79□□□□□ -2.54
VCANP13611 RPS15AP38-201ENST00000413110 372 ntBASIC-0.79□□□□□ -2.54
VCANP13611 AC107626.1-201ENST00000471084 183 ntBASIC-0.79□□□□□ -2.54
VCANP13611 RMST_7.1-201ENST00000621935 268 ntBASIC-0.79□□□□□ -2.54
VCANP13611 AC091912.2-201ENST00000624798 167 ntBASIC-0.79□□□□□ -2.54
VCANP13611 HSPE1P7-201ENST00000604681 321 ntBASIC-0.8□□□□□ -2.54
VCANP13611 AL603839.4-201ENST00000624658 1005 ntBASIC-0.8□□□□□ -2.54
VCANP13611 RNU6-748P-201ENST00000384648 107 ntBASIC-0.8□□□□□ -2.54
VCANP13611 AL353621.1-201ENST00000418219 243 ntBASIC-0.8□□□□□ -2.54
VCANP13611 AL096829.2-201ENST00000446582 742 ntBASIC-0.8□□□□□ -2.54
VCANP13611 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.8□□□□□ -2.54
VCANP13611 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC-0.8□□□□□ -2.54
VCANP13611 MTND5P16-201ENST00000460269 1703 ntBASIC-0.8□□□□□ -2.54
VCANP13611 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.8□□□□□ -2.54
VCANP13611 RNA5SP137-201ENST00000516833 135 ntBASIC-0.8□□□□□ -2.54
VCANP13611 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC-0.8□□□□□ -2.54
VCANP13611 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC-0.8□□□□□ -2.54
VCANP13611 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC-0.8□□□□□ -2.54
VCANP13611 OR51AB1P-201ENST00000429046 620 ntBASIC-0.81□□□□□ -2.54
VCANP13611 AC109445.1-201ENST00000512356 383 ntBASIC-0.81□□□□□ -2.54
VCANP13611 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC-0.81□□□□□ -2.54
VCANP13611 AC122134.1-202ENST00000569111 1201 ntBASIC-0.81□□□□□ -2.54
VCANP13611 AC068276.1-201ENST00000605793 379 ntBASIC-0.81□□□□□ -2.54
VCANP13611 AC092634.7-201ENST00000621022 103 ntBASIC-0.81□□□□□ -2.54
VCANP13611 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.81□□□□□ -2.54
VCANP13611 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.82□□□□□ -2.54
VCANP13611 RNU6-917P-201ENST00000516294 104 ntBASIC-0.82□□□□□ -2.54
VCANP13611 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC-0.82□□□□□ -2.54
VCANP13611 AC004805.2-201ENST00000605382 482 ntBASIC-0.82□□□□□ -2.54
VCANP13611 MTATP6P16-201ENST00000434543 526 ntBASIC-0.82□□□□□ -2.54
VCANP13611 AC116562.3-201ENST00000506136 177 ntBASIC-0.82□□□□□ -2.54
VCANP13611 RN7SKP258-201ENST00000517151 304 ntBASIC-0.82□□□□□ -2.54
VCANP13611 AC090572.1-201ENST00000519251 160 ntBASIC-0.82□□□□□ -2.54
VCANP13611 ARL2BPP5-201ENST00000523141 481 ntBASIC-0.82□□□□□ -2.54
VCANP13611 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC-0.82□□□□□ -2.54
VCANP13611 SNORA12-201ENST00000391162 147 ntBASIC-0.82□□□□□ -2.54
VCANP13611 HNRNPDP2-201ENST00000406475 478 ntBASIC-0.82□□□□□ -2.54
VCANP13611 AC021231.3-201ENST00000558497 370 ntBASIC-0.82□□□□□ -2.54
VCANP13611 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC-0.82□□□□□ -2.54
VCANP13611 AP000676.3-201ENST00000623299 569 ntBASIC-0.82□□□□□ -2.54
VCANP13611 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC-0.83□□□□□ -2.54
VCANP13611 RNU6-163P-201ENST00000384396 106 ntBASIC-0.83□□□□□ -2.54
VCANP13611 MIR548H2-201ENST00000408874 88 ntBASIC-0.83□□□□□ -2.54
VCANP13611 AL031313.1-201ENST00000448435 256 ntBASIC-0.83□□□□□ -2.54
VCANP13611 AC113410.1-201ENST00000505029 247 ntBASIC-0.83□□□□□ -2.54
VCANP13611 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC-0.83□□□□□ -2.54
VCANP13611 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC-0.83□□□□□ -2.54
VCANP13611 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.83□□□□□ -2.54
VCANP13611 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC-0.83□□□□□ -2.54
VCANP13611 AC009268.2-201ENST00000621925 457 ntBASIC-0.83□□□□□ -2.54
VCANP13611 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.83□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms