Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 AL591034.2-201ENST00000402839 359 ntBASIC1.07□□□□□ -2.24
COL4A2P08572 AC010099.3-201ENST00000423896 409 ntBASIC1.07□□□□□ -2.24
COL4A2P08572 AC096920.1-201ENST00000423991 241 ntBASIC1.07□□□□□ -2.24
COL4A2P08572 AC007283.2-201ENST00000424739 197 ntBASIC1.07□□□□□ -2.24
COL4A2P08572 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.07□□□□□ -2.24
COL4A2P08572 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.07□□□□□ -2.24
COL4A2P08572 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.07□□□□□ -2.24
COL4A2P08572 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.07□□□□□ -2.24
COL4A2P08572 RPL31P58-201ENST00000469001 379 ntBASIC1.07□□□□□ -2.24
COL4A2P08572 SNORA4.4-201ENST00000515921 135 ntBASIC1.07□□□□□ -2.24
COL4A2P08572 RNA5SP337-201ENST00000517007 109 ntBASIC1.07□□□□□ -2.24
COL4A2P08572 ZNF519P3-201ENST00000557158 1032 ntBASIC1.07□□□□□ -2.24
COL4A2P08572 MIR5000-201ENST00000577717 103 ntBASIC1.07□□□□□ -2.24
COL4A2P08572 DEFB131E-202ENST00000602581 683 ntBASIC1.07□□□□□ -2.24
COL4A2P08572 AC021646.1-201ENST00000605469 484 ntBASIC1.07□□□□□ -2.24
COL4A2P08572 AL050343.2-201ENST00000607338 280 ntBASIC1.07□□□□□ -2.24
COL4A2P08572 AL133173.2-201ENST00000614270 90 ntBASIC1.07□□□□□ -2.24
COL4A2P08572 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.07□□□□□ -2.24
COL4A2P08572 AC092192.1-201ENST00000633154 1018 ntBASIC1.07□□□□□ -2.24
COL4A2P08572 MTND4P4-201ENST00000439033 1366 ntBASIC1.07□□□□□ -2.24
COL4A2P08572 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.07□□□□□ -2.24
COL4A2P08572 RNU6-500P-201ENST00000362349 107 ntBASIC1.06□□□□□ -2.24
COL4A2P08572 RNU6-1010P-201ENST00000362757 107 ntBASIC1.06□□□□□ -2.24
COL4A2P08572 RNU6-527P-201ENST00000363425 104 ntBASIC1.06□□□□□ -2.24
COL4A2P08572 RNU6-487P-201ENST00000365430 104 ntBASIC1.06□□□□□ -2.24
COL4A2P08572 SNORA25B-201ENST00000365507 128 ntBASIC1.06□□□□□ -2.24
COL4A2P08572 RNU6-61P-201ENST00000365528 109 ntBASIC1.06□□□□□ -2.24
COL4A2P08572 MIR625-201ENST00000385047 85 ntBASIC1.06□□□□□ -2.24
COL4A2P08572 RPL23AP32-201ENST00000395315 459 ntBASIC1.06□□□□□ -2.24
COL4A2P08572 AL356432.1-201ENST00000405809 419 ntBASIC1.06□□□□□ -2.24
COL4A2P08572 AC092809.3-201ENST00000415453 231 ntBASIC1.06□□□□□ -2.24
COL4A2P08572 AL353689.1-201ENST00000438895 199 ntBASIC1.06□□□□□ -2.24
COL4A2P08572 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.06□□□□□ -2.24
COL4A2P08572 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.06□□□□□ -2.24
COL4A2P08572 AP001025.1-201ENST00000486139 332 ntBASIC1.06□□□□□ -2.24
COL4A2P08572 RPL30P1-201ENST00000488676 339 ntBASIC1.06□□□□□ -2.24
COL4A2P08572 HMGB1P30-201ENST00000492455 606 ntBASIC1.06□□□□□ -2.24
COL4A2P08572 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.06□□□□□ -2.24
COL4A2P08572 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.06□□□□□ -2.24
COL4A2P08572 MRPS36P3-201ENST00000519284 130 ntBASIC1.06□□□□□ -2.24
COL4A2P08572 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.06□□□□□ -2.24
COL4A2P08572 MIR98-201ENST00000606724 119 ntBASIC1.06□□□□□ -2.24
COL4A2P08572 AL359314.1-201ENST00000616913 261 ntBASIC1.06□□□□□ -2.24
COL4A2P08572 RBBP8P1-201ENST00000449447 1844 ntBASIC1.06□□□□□ -2.24
COL4A2P08572 AC091812.1-201ENST00000432235 1948 ntBASIC1.06□□□□□ -2.24
COL4A2P08572 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.06□□□□□ -2.24
COL4A2P08572 RNA5SP276-201ENST00000362580 94 ntBASIC1.06□□□□□ -2.24
COL4A2P08572 RNU5E-5P-201ENST00000365379 116 ntBASIC1.06□□□□□ -2.24
COL4A2P08572 RNU6-72P-201ENST00000384285 79 ntBASIC1.06□□□□□ -2.24
COL4A2P08572 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
COL4A2P08572 RNU2-48P-201ENST00000410694 191 ntBASIC1.06□□□□□ -2.24
COL4A2P08572 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.06□□□□□ -2.24
COL4A2P08572 AC011233.1-201ENST00000422812 283 ntBASIC1.06□□□□□ -2.24
COL4A2P08572 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.06□□□□□ -2.24
COL4A2P08572 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.06□□□□□ -2.24
COL4A2P08572 AL583843.1-201ENST00000456070 346 ntBASIC1.06□□□□□ -2.24
COL4A2P08572 AC112206.3-201ENST00000514578 389 ntBASIC1.06□□□□□ -2.24
COL4A2P08572 SNORA48.11-201ENST00000517015 89 ntBASIC1.06□□□□□ -2.24
COL4A2P08572 AP003122.4-201ENST00000530980 758 ntBASIC1.06□□□□□ -2.24
COL4A2P08572 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.06□□□□□ -2.24
COL4A2P08572 AC008521.1-201ENST00000587471 187 ntBASIC1.06□□□□□ -2.24
COL4A2P08572 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.06□□□□□ -2.24
COL4A2P08572 AL096840.1-201ENST00000603287 93 ntBASIC1.06□□□□□ -2.24
COL4A2P08572 AC005034.5-201ENST00000604219 466 ntBASIC1.06□□□□□ -2.24
COL4A2P08572 AL627230.6-201ENST00000611129 280 ntBASIC1.06□□□□□ -2.24
COL4A2P08572 AC022202.1-201ENST00000613515 211 ntBASIC1.06□□□□□ -2.24
COL4A2P08572 AL159153.1-201ENST00000619688 317 ntBASIC1.06□□□□□ -2.24
COL4A2P08572 SNORA16B-201ENST00000364674 135 ntBASIC1.05□□□□□ -2.24
COL4A2P08572 RNU6-641P-201ENST00000384006 107 ntBASIC1.05□□□□□ -2.24
COL4A2P08572 CBX3P9-201ENST00000402326 552 ntBASIC1.05□□□□□ -2.24
COL4A2P08572 MTCYBP5-201ENST00000423752 1135 ntBASIC1.05□□□□□ -2.24
COL4A2P08572 MTND4P20-201ENST00000424125 869 ntBASIC1.05□□□□□ -2.24
COL4A2P08572 MTCO3P46-201ENST00000425787 232 ntBASIC1.05□□□□□ -2.24
COL4A2P08572 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.05□□□□□ -2.24
COL4A2P08572 AC245102.2-201ENST00000448956 180 ntBASIC1.05□□□□□ -2.24
COL4A2P08572 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.05□□□□□ -2.24
COL4A2P08572 AL033528.1-201ENST00000453780 140 ntBASIC1.05□□□□□ -2.24
COL4A2P08572 snoU13.14-201ENST00000459372 104 ntBASIC1.05□□□□□ -2.24
COL4A2P08572 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.05□□□□□ -2.24
COL4A2P08572 AC096745.1-201ENST00000509945 370 ntBASIC1.05□□□□□ -2.24
COL4A2P08572 AC091965.2-201ENST00000512324 613 ntBASIC1.05□□□□□ -2.24
COL4A2P08572 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.05□□□□□ -2.24
COL4A2P08572 Y_RNA.672-201ENST00000516289 104 ntBASIC1.05□□□□□ -2.24
COL4A2P08572 RNA5SP476-201ENST00000516613 103 ntBASIC1.05□□□□□ -2.24
COL4A2P08572 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.05□□□□□ -2.24
COL4A2P08572 AC022616.8-201ENST00000533569 253 ntBASIC1.05□□□□□ -2.24
COL4A2P08572 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.05□□□□□ -2.24
COL4A2P08572 HMGN1P30-201ENST00000589286 268 ntBASIC1.05□□□□□ -2.24
COL4A2P08572 AC103810.9-201ENST00000606688 112 ntBASIC1.05□□□□□ -2.24
COL4A2P08572 AL022345.1-201ENST00000607292 135 ntBASIC1.05□□□□□ -2.24
COL4A2P08572 AC093648.1-201ENST00000623546 606 ntBASIC1.05□□□□□ -2.24
COL4A2P08572 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
COL4A2P08572 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
COL4A2P08572 SNORD3E-201ENST00000362899 217 ntBASIC1.04□□□□□ -2.24
COL4A2P08572 SNORA24.1-201ENST00000384401 135 ntBASIC1.04□□□□□ -2.24
COL4A2P08572 MIR29C-201ENST00000385231 88 ntBASIC1.04□□□□□ -2.24
COL4A2P08572 CALM2P2-201ENST00000428512 440 ntBASIC1.04□□□□□ -2.24
COL4A2P08572 AL591043.1-201ENST00000432461 424 ntBASIC1.04□□□□□ -2.24
COL4A2P08572 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.04□□□□□ -2.24
COL4A2P08572 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms