Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 Y_RNA.452-201ENST00000384202 108 ntBASIC3.2□□□□□ -1.9
RHOP08100 RNU6-1035P-201ENST00000384477 107 ntBASIC3.2□□□□□ -1.9
RHOP08100 RNU6-658P-201ENST00000384606 106 ntBASIC3.2□□□□□ -1.9
RHOP08100 RNU6-823P-201ENST00000391042 103 ntBASIC3.2□□□□□ -1.9
RHOP08100 RNU6-1156P-201ENST00000410365 100 ntBASIC3.2□□□□□ -1.9
RHOP08100 NDUFS5P4-201ENST00000412983 318 ntBASIC3.2□□□□□ -1.9
RHOP08100 AC096644.2-201ENST00000429278 159 ntBASIC3.2□□□□□ -1.9
RHOP08100 AL139132.1-201ENST00000431587 344 ntBASIC3.2□□□□□ -1.9
RHOP08100 AL353752.1-201ENST00000454946 260 ntBASIC3.2□□□□□ -1.9
RHOP08100 MTATP8P1-201ENST00000467115 207 ntBASIC3.2□□□□□ -1.9
RHOP08100 RPL30P10-201ENST00000488148 337 ntBASIC3.2□□□□□ -1.9
RHOP08100 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.2□□□□□ -1.9
RHOP08100 SNORD59.2-201ENST00000516873 68 ntBASIC3.2□□□□□ -1.9
RHOP08100 AC022616.4-201ENST00000522985 181 ntBASIC3.2□□□□□ -1.9
RHOP08100 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
RHOP08100 AC011602.1-201ENST00000546484 331 ntBASIC3.2□□□□□ -1.9
RHOP08100 AC004817.2-201ENST00000561794 651 ntBASIC3.2□□□□□ -1.9
RHOP08100 MIR4503-201ENST00000582187 83 ntBASIC3.2□□□□□ -1.9
RHOP08100 MIR4672-201ENST00000583126 81 ntBASIC3.2□□□□□ -1.9
RHOP08100 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.2□□□□□ -1.9
RHOP08100 AC024153.1-201ENST00000603103 365 ntBASIC3.2□□□□□ -1.9
RHOP08100 RPL12P50-201ENST00000603116 116 ntBASIC3.2□□□□□ -1.9
RHOP08100 AL138880.2-201ENST00000616214 239 ntBASIC3.2□□□□□ -1.9
RHOP08100 MIR6134-201ENST00000617606 109 ntBASIC3.2□□□□□ -1.9
RHOP08100 AC138305.3-201ENST00000624988 240 ntBASIC3.2□□□□□ -1.9
RHOP08100 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RHOP08100 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RHOP08100 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.2□□□□□ -1.9
RHOP08100 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RHOP08100 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
RHOP08100 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
RHOP08100 AC091812.1-201ENST00000432235 1948 ntBASIC3.19□□□□□ -1.9
RHOP08100 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.19□□□□□ -1.9
RHOP08100 RNU6-227P-201ENST00000362865 103 ntBASIC3.19□□□□□ -1.9
RHOP08100 RNU6-105P-201ENST00000363909 104 ntBASIC3.19□□□□□ -1.9
RHOP08100 Y_RNA.380-201ENST00000365663 111 ntBASIC3.19□□□□□ -1.9
RHOP08100 RNU6-784P-201ENST00000384330 106 ntBASIC3.19□□□□□ -1.9
RHOP08100 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
RHOP08100 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.19□□□□□ -1.9
RHOP08100 snoU109.2-201ENST00000459316 135 ntBASIC3.19□□□□□ -1.9
RHOP08100 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.19□□□□□ -1.9
RHOP08100 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.19□□□□□ -1.9
RHOP08100 SNORA43.2-201ENST00000516652 128 ntBASIC3.19□□□□□ -1.9
RHOP08100 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.19□□□□□ -1.9
RHOP08100 COX6CP5-201ENST00000527162 228 ntBASIC3.19□□□□□ -1.9
RHOP08100 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.19□□□□□ -1.9
RHOP08100 AC004584.2-201ENST00000570407 410 ntBASIC3.19□□□□□ -1.9
RHOP08100 MIR4425-201ENST00000580572 84 ntBASIC3.19□□□□□ -1.9
RHOP08100 AC016727.2-201ENST00000603988 621 ntBASIC3.19□□□□□ -1.9
RHOP08100 Z98751.3-201ENST00000604447 521 ntBASIC3.19□□□□□ -1.9
RHOP08100 HMGB1P24-202ENST00000615653 685 ntBASIC3.19□□□□□ -1.9
RHOP08100 AC010205.1-201ENST00000616668 449 ntBASIC3.19□□□□□ -1.9
RHOP08100 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.19□□□□□ -1.9
RHOP08100 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.19□□□□□ -1.9
RHOP08100 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.19□□□□□ -1.9
RHOP08100 CDC27P3-201ENST00000635418 1910 ntBASIC3.19□□□□□ -1.9
RHOP08100 MTND5P27-201ENST00000428871 1720 ntBASIC3.19□□□□□ -1.9
RHOP08100 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RHOP08100 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RHOP08100 AC007496.3-201ENST00000624987 3443 ntBASIC3.18□□□□□ -1.9
RHOP08100 FAM35BP-202ENST00000497389 3337 ntBASIC3.18□□□□□ -1.9
RHOP08100 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RHOP08100 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
RHOP08100 RNU6-942P-201ENST00000363002 107 ntBASIC3.18□□□□□ -1.9
RHOP08100 Y_RNA.389-201ENST00000383924 113 ntBASIC3.18□□□□□ -1.9
RHOP08100 MIR625-201ENST00000385047 85 ntBASIC3.18□□□□□ -1.9
RHOP08100 RNU1-101P-201ENST00000391171 127 ntBASIC3.18□□□□□ -1.9
RHOP08100 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
RHOP08100 AL031121.1-201ENST00000406553 254 ntBASIC3.18□□□□□ -1.9
RHOP08100 RNU6-101P-201ENST00000410323 104 ntBASIC3.18□□□□□ -1.9
RHOP08100 AP000275.1-201ENST00000411943 390 ntBASIC3.18□□□□□ -1.9
RHOP08100 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.18□□□□□ -1.9
RHOP08100 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.18□□□□□ -1.9
RHOP08100 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RHOP08100 CHEK2P4-201ENST00000450340 246 ntBASIC3.18□□□□□ -1.9
RHOP08100 U8.20-201ENST00000459445 131 ntBASIC3.18□□□□□ -1.9
RHOP08100 AC093852.1-201ENST00000503587 266 ntBASIC3.18□□□□□ -1.9
RHOP08100 AC091826.1-201ENST00000514065 313 ntBASIC3.18□□□□□ -1.9
RHOP08100 RNA5SP356-201ENST00000515972 94 ntBASIC3.18□□□□□ -1.9
RHOP08100 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.18□□□□□ -1.9
RHOP08100 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.18□□□□□ -1.9
RHOP08100 AC008269.2-201ENST00000561915 1105 ntBASIC3.18□□□□□ -1.9
RHOP08100 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.18□□□□□ -1.9
RHOP08100 MIR3149-201ENST00000584629 83 ntBASIC3.18□□□□□ -1.9
RHOP08100 AL355297.3-201ENST00000604082 446 ntBASIC3.18□□□□□ -1.9
RHOP08100 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
RHOP08100 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RHOP08100 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.17□□□□□ -1.9
RHOP08100 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.17□□□□□ -1.9
RHOP08100 Y_RNA.106-201ENST00000363189 100 ntBASIC3.17□□□□□ -1.9
RHOP08100 Y_RNA.176-201ENST00000363815 109 ntBASIC3.17□□□□□ -1.9
RHOP08100 RNU6-884P-201ENST00000363889 107 ntBASIC3.17□□□□□ -1.9
RHOP08100 RNU6-270P-201ENST00000364131 105 ntBASIC3.17□□□□□ -1.9
RHOP08100 RNU6-574P-201ENST00000384265 107 ntBASIC3.17□□□□□ -1.9
RHOP08100 Y_RNA.485-201ENST00000384395 102 ntBASIC3.17□□□□□ -1.9
RHOP08100 MIR1302-3-201ENST00000408128 138 ntBASIC3.17□□□□□ -1.9
RHOP08100 RNA5SP38-201ENST00000410750 119 ntBASIC3.17□□□□□ -1.9
RHOP08100 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RHOP08100 MTND3P9-201ENST00000429526 346 ntBASIC3.17□□□□□ -1.9
RHOP08100 AL135938.1-201ENST00000443141 297 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms