Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 RNU6-438P-201ENST00000365561 103 ntBASIC1.38□□□□□ -2.19
TPM2P07951 RNU6-39P-201ENST00000384344 107 ntBASIC1.38□□□□□ -2.19
TPM2P07951 SNORD115.1-201ENST00000391109 76 ntBASIC1.38□□□□□ -2.19
TPM2P07951 RNU2-39P-201ENST00000410604 198 ntBASIC1.38□□□□□ -2.19
TPM2P07951 RPL37P10-201ENST00000412884 288 ntBASIC1.38□□□□□ -2.19
TPM2P07951 MTCYBP39-201ENST00000437562 491 ntBASIC1.38□□□□□ -2.19
TPM2P07951 SNRPEP8-201ENST00000442866 260 ntBASIC1.38□□□□□ -2.19
TPM2P07951 OR2AQ1P-201ENST00000451972 200 ntBASIC1.38□□□□□ -2.19
TPM2P07951 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.38□□□□□ -2.19
TPM2P07951 RBBP4P6-201ENST00000508098 202 ntBASIC1.38□□□□□ -2.19
TPM2P07951 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.38□□□□□ -2.19
TPM2P07951 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.38□□□□□ -2.19
TPM2P07951 AP003033.1-201ENST00000527244 415 ntBASIC1.38□□□□□ -2.19
TPM2P07951 MIR3136-201ENST00000583498 78 ntBASIC1.38□□□□□ -2.19
TPM2P07951 AC069114.2-201ENST00000604699 304 ntBASIC1.38□□□□□ -2.19
TPM2P07951 AC105148.1-201ENST00000604961 409 ntBASIC1.38□□□□□ -2.19
TPM2P07951 SNORD98-201ENST00000636377 67 ntBASIC1.38□□□□□ -2.19
TPM2P07951 U4.7-201ENST00000638126 106 ntBASIC1.38□□□□□ -2.19
TPM2P07951 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.37□□□□□ -2.19
TPM2P07951 AC010615.1-201ENST00000594254 1764 ntBASIC1.37□□□□□ -2.19
TPM2P07951 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.37□□□□□ -2.19
TPM2P07951 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
TPM2P07951 SNORA22-201ENST00000383907 134 ntBASIC1.37□□□□□ -2.19
TPM2P07951 SNORA22C-201ENST00000384614 134 ntBASIC1.37□□□□□ -2.19
TPM2P07951 RPL23AP32-201ENST00000395315 459 ntBASIC1.37□□□□□ -2.19
TPM2P07951 MRPL35P1-201ENST00000404272 572 ntBASIC1.37□□□□□ -2.19
TPM2P07951 EIF1P1-201ENST00000421436 341 ntBASIC1.37□□□□□ -2.19
TPM2P07951 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.37□□□□□ -2.19
TPM2P07951 AC084290.1-201ENST00000434995 374 ntBASIC1.37□□□□□ -2.19
TPM2P07951 AL049829.1-201ENST00000465411 156 ntBASIC1.37□□□□□ -2.19
TPM2P07951 HSPE1P23-201ENST00000509838 286 ntBASIC1.37□□□□□ -2.19
TPM2P07951 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.37□□□□□ -2.19
TPM2P07951 AP001893.2-201ENST00000526949 202 ntBASIC1.37□□□□□ -2.19
TPM2P07951 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.37□□□□□ -2.19
TPM2P07951 AC087883.1-201ENST00000551882 391 ntBASIC1.37□□□□□ -2.19
TPM2P07951 AC090115.3-201ENST00000553218 849 ntBASIC1.37□□□□□ -2.19
TPM2P07951 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.37□□□□□ -2.19
TPM2P07951 AC008521.1-201ENST00000587471 187 ntBASIC1.37□□□□□ -2.19
TPM2P07951 RNU4-5P-201ENST00000607255 135 ntBASIC1.37□□□□□ -2.19
TPM2P07951 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.37□□□□□ -2.19
TPM2P07951 MTND5P35-201ENST00000557537 1720 ntBASIC1.37□□□□□ -2.19
TPM2P07951 RNA5SP327-201ENST00000362494 101 ntBASIC1.36□□□□□ -2.19
TPM2P07951 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.36□□□□□ -2.19
TPM2P07951 AC010587.1-201ENST00000505809 469 ntBASIC1.36□□□□□ -2.19
TPM2P07951 AC079140.3-201ENST00000511111 550 ntBASIC1.36□□□□□ -2.19
TPM2P07951 RNU5A-4P-201ENST00000516588 111 ntBASIC1.36□□□□□ -2.19
TPM2P07951 RNA5SP481-201ENST00000516814 122 ntBASIC1.36□□□□□ -2.19
TPM2P07951 RNA5SP437-201ENST00000517249 129 ntBASIC1.36□□□□□ -2.19
TPM2P07951 MIR4509-3-201ENST00000578671 94 ntBASIC1.36□□□□□ -2.19
TPM2P07951 MIR4509-2-201ENST00000583920 94 ntBASIC1.36□□□□□ -2.19
TPM2P07951 VN1R80P-201ENST00000597126 338 ntBASIC1.36□□□□□ -2.19
TPM2P07951 AL512598.1-201ENST00000610158 273 ntBASIC1.36□□□□□ -2.19
TPM2P07951 MIR4509-1-201ENST00000618224 94 ntBASIC1.36□□□□□ -2.19
TPM2P07951 AL049777.1-201ENST00000622740 518 ntBASIC1.36□□□□□ -2.19
TPM2P07951 RNU6-1065P-201ENST00000384513 106 ntBASIC1.35□□□□□ -2.19
TPM2P07951 MIR548B-201ENST00000385247 97 ntBASIC1.35□□□□□ -2.19
TPM2P07951 SNORA40.6-201ENST00000391153 128 ntBASIC1.35□□□□□ -2.19
TPM2P07951 MED13P1-201ENST00000428342 171 ntBASIC1.35□□□□□ -2.19
TPM2P07951 RPS24P1-201ENST00000438550 371 ntBASIC1.35□□□□□ -2.19
TPM2P07951 AC010095.1-201ENST00000443543 144 ntBASIC1.35□□□□□ -2.19
TPM2P07951 RPS29P28-201ENST00000446439 141 ntBASIC1.35□□□□□ -2.19
TPM2P07951 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.35□□□□□ -2.19
TPM2P07951 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.35□□□□□ -2.19
TPM2P07951 OR2A41P-201ENST00000473586 105 ntBASIC1.35□□□□□ -2.19
TPM2P07951 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.35□□□□□ -2.19
TPM2P07951 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.35□□□□□ -2.19
TPM2P07951 MTND3P25-201ENST00000509243 135 ntBASIC1.35□□□□□ -2.19
TPM2P07951 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.35□□□□□ -2.19
TPM2P07951 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC1.35□□□□□ -2.19
TPM2P07951 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.35□□□□□ -2.19
TPM2P07951 MIR4303-201ENST00000581299 66 ntBASIC1.35□□□□□ -2.19
TPM2P07951 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.35□□□□□ -2.19
TPM2P07951 AC110760.3-201ENST00000598794 467 ntBASIC1.35□□□□□ -2.19
TPM2P07951 AL158050.2-201ENST00000605336 568 ntBASIC1.35□□□□□ -2.19
TPM2P07951 AL031667.3-201ENST00000620124 655 ntBASIC1.35□□□□□ -2.19
TPM2P07951 RNU6-105P-201ENST00000363909 104 ntBASIC1.34□□□□□ -2.19
TPM2P07951 RNU6-641P-201ENST00000384006 107 ntBASIC1.34□□□□□ -2.19
TPM2P07951 MIR558-201ENST00000384920 94 ntBASIC1.34□□□□□ -2.19
TPM2P07951 AL161935.2-201ENST00000414627 60 ntBASIC1.34□□□□□ -2.19
TPM2P07951 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.34□□□□□ -2.19
TPM2P07951 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.34□□□□□ -2.19
TPM2P07951 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC1.34□□□□□ -2.19
TPM2P07951 AC004223.1-201ENST00000479840 271 ntBASIC1.34□□□□□ -2.19
TPM2P07951 AL133373.1-201ENST00000497098 94 ntBASIC1.34□□□□□ -2.19
TPM2P07951 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.34□□□□□ -2.19
TPM2P07951 ATP5EP1-201ENST00000510257 156 ntBASIC1.34□□□□□ -2.19
TPM2P07951 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.34□□□□□ -2.19
TPM2P07951 RNU7-40P-201ENST00000516397 64 ntBASIC1.34□□□□□ -2.19
TPM2P07951 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.34□□□□□ -2.19
TPM2P07951 DNAJC19P9-201ENST00000555084 351 ntBASIC1.34□□□□□ -2.19
TPM2P07951 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.34□□□□□ -2.19
TPM2P07951 AC109446.1-201ENST00000566172 220 ntBASIC1.34□□□□□ -2.19
TPM2P07951 AC015688.6-201ENST00000577737 104 ntBASIC1.34□□□□□ -2.19
TPM2P07951 AP003465.2-201ENST00000602571 373 ntBASIC1.34□□□□□ -2.19
TPM2P07951 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.34□□□□□ -2.19
TPM2P07951 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
TPM2P07951 RNU4-1-201ENST00000363925 141 ntBASIC1.33□□□□□ -2.2
TPM2P07951 RNU6-533P-201ENST00000384144 107 ntBASIC1.33□□□□□ -2.2
TPM2P07951 RNU6-83P-201ENST00000384568 112 ntBASIC1.33□□□□□ -2.2
TPM2P07951 MRPL42P2-201ENST00000403169 426 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms