Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 UBE2V1P10-201ENST00000414685 269 ntBASIC-0.27□□□□□ -2.45
APOBP04114 ELOCP24-201ENST00000456370 334 ntBASIC-0.27□□□□□ -2.45
APOBP04114 AC119674.1-220ENST00000641502 1048 ntBASIC-0.27□□□□□ -2.45
APOBP04114 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC-0.27□□□□□ -2.45
APOBP04114 MIR140-201ENST00000385282 100 ntBASIC-0.27□□□□□ -2.45
APOBP04114 MT-TC-201ENST00000387405 66 ntBASIC-0.27□□□□□ -2.45
APOBP04114 BTF3L4P1-201ENST00000413813 468 ntBASIC-0.27□□□□□ -2.45
APOBP04114 RAB11AP1-201ENST00000442978 646 ntBASIC-0.27□□□□□ -2.45
APOBP04114 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC-0.27□□□□□ -2.45
APOBP04114 SUMO2P16-201ENST00000519475 264 ntBASIC-0.27□□□□□ -2.45
APOBP04114 MIR8076-201ENST00000611401 83 ntBASIC-0.27□□□□□ -2.45
APOBP04114 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.27□□□□□ -2.45
APOBP04114 SNORA63D-201ENST00000364359 132 ntBASIC-0.27□□□□□ -2.45
APOBP04114 RNU6-969P-201ENST00000383900 105 ntBASIC-0.27□□□□□ -2.45
APOBP04114 SNORD65-201ENST00000391079 73 ntBASIC-0.27□□□□□ -2.45
APOBP04114 MTCO2P34-201ENST00000421994 607 ntBASIC-0.27□□□□□ -2.45
APOBP04114 BEND7P1-201ENST00000422058 457 ntBASIC-0.27□□□□□ -2.45
APOBP04114 TAAR7P-201ENST00000436141 242 ntBASIC-0.27□□□□□ -2.45
APOBP04114 SNRPEP9-201ENST00000436794 238 ntBASIC-0.27□□□□□ -2.45
APOBP04114 RPS20P24-201ENST00000457473 361 ntBASIC-0.27□□□□□ -2.45
APOBP04114 AC021146.9-201ENST00000512503 156 ntBASIC-0.27□□□□□ -2.45
APOBP04114 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC-0.27□□□□□ -2.45
APOBP04114 AC124293.1-201ENST00000530034 493 ntBASIC-0.27□□□□□ -2.45
APOBP04114 MIR5094-201ENST00000578766 85 ntBASIC-0.27□□□□□ -2.45
APOBP04114 AC093788.1-201ENST00000609356 927 ntBASIC-0.27□□□□□ -2.45
APOBP04114 AL355073.2-201ENST00000612106 557 ntBASIC-0.27□□□□□ -2.45
APOBP04114 AC100810.6-201ENST00000638068 285 ntBASIC-0.27□□□□□ -2.45
APOBP04114 SNORD116-13-201ENST00000384408 92 ntBASIC-0.28□□□□□ -2.45
APOBP04114 TRAPPC2P7-201ENST00000509650 231 ntBASIC-0.28□□□□□ -2.45
APOBP04114 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC-0.28□□□□□ -2.45
APOBP04114 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC-0.28□□□□□ -2.45
APOBP04114 AL121992.2-201ENST00000606262 256 ntBASIC-0.28□□□□□ -2.45
APOBP04114 7SK.10-201ENST00000621414 298 ntBASIC-0.28□□□□□ -2.45
APOBP04114 AC004009.2-201ENST00000623016 728 ntBASIC-0.28□□□□□ -2.45
APOBP04114 RNU6-1243P-201ENST00000364028 107 ntBASIC-0.28□□□□□ -2.45
APOBP04114 RNU6-119P-201ENST00000364882 107 ntBASIC-0.28□□□□□ -2.45
APOBP04114 SEPT7P5-201ENST00000434048 306 ntBASIC-0.28□□□□□ -2.45
APOBP04114 SEPT7P4-201ENST00000437076 306 ntBASIC-0.28□□□□□ -2.45
APOBP04114 AC004865.1-201ENST00000442276 1003 ntBASIC-0.28□□□□□ -2.45
APOBP04114 RAC1P7-201ENST00000445367 377 ntBASIC-0.28□□□□□ -2.45
APOBP04114 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC-0.28□□□□□ -2.45
APOBP04114 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC-0.28□□□□□ -2.45
APOBP04114 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.28□□□□□ -2.45
APOBP04114 SNORD14C-201ENST00000365382 88 ntBASIC-0.28□□□□□ -2.45
APOBP04114 RNU6-877P-201ENST00000383868 107 ntBASIC-0.28□□□□□ -2.45
APOBP04114 MTCO3P5-201ENST00000433620 714 ntBASIC-0.28□□□□□ -2.45
APOBP04114 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC-0.28□□□□□ -2.45
APOBP04114 AC104689.1-201ENST00000473356 768 ntBASIC-0.28□□□□□ -2.45
APOBP04114 RNU6-91P-201ENST00000607774 107 ntBASIC-0.28□□□□□ -2.45
APOBP04114 FTX_2.1-201ENST00000618816 94 ntBASIC-0.28□□□□□ -2.45
APOBP04114 AC092634.7-201ENST00000621022 103 ntBASIC-0.28□□□□□ -2.45
APOBP04114 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.28□□□□□ -2.45
APOBP04114 NANOGP2-201ENST00000435391 727 ntBASIC-0.28□□□□□ -2.45
APOBP04114 RPL30P1-201ENST00000488676 339 ntBASIC-0.28□□□□□ -2.45
APOBP04114 AC010587.2-201ENST00000511727 448 ntBASIC-0.28□□□□□ -2.45
APOBP04114 AP003392.2-201ENST00000527269 208 ntBASIC-0.28□□□□□ -2.45
APOBP04114 AC124947.2-202ENST00000552735 133 ntBASIC-0.28□□□□□ -2.45
APOBP04114 RNU6-1097P-201ENST00000363586 107 ntBASIC-0.29□□□□□ -2.46
APOBP04114 RNU6-1251P-201ENST00000364502 107 ntBASIC-0.29□□□□□ -2.46
APOBP04114 RNU6-233P-201ENST00000410845 141 ntBASIC-0.29□□□□□ -2.46
APOBP04114 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.29□□□□□ -2.46
APOBP04114 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC-0.29□□□□□ -2.46
APOBP04114 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC-0.29□□□□□ -2.46
APOBP04114 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC-0.29□□□□□ -2.46
APOBP04114 MTND2P24-201ENST00000453434 806 ntBASIC-0.29□□□□□ -2.46
APOBP04114 SNORD4A-201ENST00000459174 72 ntBASIC-0.29□□□□□ -2.46
APOBP04114 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC-0.29□□□□□ -2.46
APOBP04114 AC023157.2-201ENST00000540596 141 ntBASIC-0.29□□□□□ -2.46
APOBP04114 RNU6-884P-201ENST00000363889 107 ntBASIC-0.29□□□□□ -2.46
APOBP04114 MIR597-201ENST00000384968 97 ntBASIC-0.29□□□□□ -2.46
APOBP04114 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.29□□□□□ -2.46
APOBP04114 AC093422.3-201ENST00000428506 305 ntBASIC-0.29□□□□□ -2.46
APOBP04114 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC-0.29□□□□□ -2.46
APOBP04114 AC005176.2-201ENST00000596933 147 ntBASIC-0.29□□□□□ -2.46
APOBP04114 AL353778.1-201ENST00000603149 408 ntBASIC-0.29□□□□□ -2.46
APOBP04114 AL583856.2-201ENST00000606298 543 ntBASIC-0.29□□□□□ -2.46
APOBP04114 RNU6-815P-201ENST00000384080 113 ntBASIC-0.29□□□□□ -2.46
APOBP04114 AL049545.1-201ENST00000401856 572 ntBASIC-0.29□□□□□ -2.46
APOBP04114 SNORD71-201ENST00000411292 86 ntBASIC-0.29□□□□□ -2.46
APOBP04114 AL008629.1-201ENST00000438615 184 ntBASIC-0.29□□□□□ -2.46
APOBP04114 AC091860.1-201ENST00000505723 432 ntBASIC-0.29□□□□□ -2.46
APOBP04114 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC-0.29□□□□□ -2.46
APOBP04114 AC079140.3-201ENST00000511111 550 ntBASIC-0.29□□□□□ -2.46
APOBP04114 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC-0.29□□□□□ -2.46
APOBP04114 5S_rRNA.11-201ENST00000618635 84 ntBASIC-0.29□□□□□ -2.46
APOBP04114 CASC19-280ENST00000642102 1351 ntBASIC-0.29□□□□□ -2.46
APOBP04114 RNU6-10P-201ENST00000384036 107 ntBASIC-0.3□□□□□ -2.46
APOBP04114 RNU6-15P-201ENST00000384534 107 ntBASIC-0.3□□□□□ -2.46
APOBP04114 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC-0.3□□□□□ -2.46
APOBP04114 AC022861.1-201ENST00000522981 663 ntBASIC-0.3□□□□□ -2.46
APOBP04114 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.3□□□□□ -2.46
APOBP04114 AC112187.2-201ENST00000604345 283 ntBASIC-0.3□□□□□ -2.46
APOBP04114 AL592221.1-201ENST00000605266 382 ntBASIC-0.3□□□□□ -2.46
APOBP04114 MIR1285-2-201ENST00000408311 88 ntBASIC-0.3□□□□□ -2.46
APOBP04114 RNU6-284P-201ENST00000411105 106 ntBASIC-0.3□□□□□ -2.46
APOBP04114 AC123900.1-201ENST00000420390 96 ntBASIC-0.3□□□□□ -2.46
APOBP04114 RAC1P8-201ENST00000427086 527 ntBASIC-0.3□□□□□ -2.46
APOBP04114 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC-0.3□□□□□ -2.46
APOBP04114 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC-0.3□□□□□ -2.46
APOBP04114 AC005261.5-201ENST00000596280 355 ntBASIC-0.3□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms