Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.4□□□□□ -2.03
VTNP04004 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
VTNP04004 AC010378.1-201ENST00000619270 362 ntBASIC2.4□□□□□ -2.03
VTNP04004 AL136221.1-201ENST00000621449 509 ntBASIC2.4□□□□□ -2.03
VTNP04004 AL359757.2-201ENST00000624309 274 ntBASIC2.4□□□□□ -2.03
VTNP04004 SCARNA4-202ENST00000625402 129 ntBASIC2.4□□□□□ -2.03
VTNP04004 AC099654.14-201ENST00000638599 341 ntBASIC2.4□□□□□ -2.03
VTNP04004 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
VTNP04004 AC010329.5-201ENST00000623497 2174 ntBASIC2.39□□□□□ -2.03
VTNP04004 CDC27P3-201ENST00000635418 1910 ntBASIC2.39□□□□□ -2.03
VTNP04004 CBX3P1-201ENST00000325243 554 ntBASIC2.39□□□□□ -2.03
VTNP04004 SNORD114-1-201ENST00000362705 72 ntBASIC2.39□□□□□ -2.03
VTNP04004 Y_RNA.100-201ENST00000363141 102 ntBASIC2.39□□□□□ -2.03
VTNP04004 RNU6-527P-201ENST00000363425 104 ntBASIC2.39□□□□□ -2.03
VTNP04004 SNORD113-7-201ENST00000363762 77 ntBASIC2.39□□□□□ -2.03
VTNP04004 RNU6-1083P-201ENST00000384022 107 ntBASIC2.39□□□□□ -2.03
VTNP04004 SNORD116-20-201ENST00000384529 92 ntBASIC2.39□□□□□ -2.03
VTNP04004 Y_RNA.530-201ENST00000384587 101 ntBASIC2.39□□□□□ -2.03
VTNP04004 RNU6-1148P-201ENST00000410992 104 ntBASIC2.39□□□□□ -2.03
VTNP04004 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.39□□□□□ -2.03
VTNP04004 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.39□□□□□ -2.03
VTNP04004 AL513185.2-201ENST00000425543 193 ntBASIC2.39□□□□□ -2.03
VTNP04004 PTGES3P4-201ENST00000426243 356 ntBASIC2.39□□□□□ -2.03
VTNP04004 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.39□□□□□ -2.03
VTNP04004 NDUFA5P4-201ENST00000436704 385 ntBASIC2.39□□□□□ -2.03
VTNP04004 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.39□□□□□ -2.03
VTNP04004 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.39□□□□□ -2.03
VTNP04004 FAM206BP-201ENST00000510179 541 ntBASIC2.39□□□□□ -2.03
VTNP04004 RNU6-377P-201ENST00000515965 102 ntBASIC2.39□□□□□ -2.03
VTNP04004 RNU4-49P-201ENST00000516080 140 ntBASIC2.39□□□□□ -2.03
VTNP04004 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.39□□□□□ -2.03
VTNP04004 RNA5SP200-201ENST00000516360 103 ntBASIC2.39□□□□□ -2.03
VTNP04004 SCARNA16.3-201ENST00000516595 184 ntBASIC2.39□□□□□ -2.03
VTNP04004 RNU6-1069P-201ENST00000516612 133 ntBASIC2.39□□□□□ -2.03
VTNP04004 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
VTNP04004 AC087854.1-201ENST00000519706 414 ntBASIC2.39□□□□□ -2.03
VTNP04004 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.39□□□□□ -2.03
VTNP04004 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.39□□□□□ -2.03
VTNP04004 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.39□□□□□ -2.03
VTNP04004 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
VTNP04004 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.39□□□□□ -2.03
VTNP04004 AC009248.2-201ENST00000619826 254 ntBASIC2.39□□□□□ -2.03
VTNP04004 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.39□□□□□ -2.03
VTNP04004 Z69720.2-201ENST00000624755 279 ntBASIC2.39□□□□□ -2.03
VTNP04004 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
VTNP04004 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
VTNP04004 AC121333.1-201ENST00000567488 2709 ntBASIC2.38□□□□□ -2.03
VTNP04004 MIR6073-201ENST00000352083 89 ntBASIC2.38□□□□□ -2.03
VTNP04004 RNU6-254P-201ENST00000363377 107 ntBASIC2.38□□□□□ -2.03
VTNP04004 RNU6-831P-201ENST00000384548 107 ntBASIC2.38□□□□□ -2.03
VTNP04004 MIR504-201ENST00000385065 83 ntBASIC2.38□□□□□ -2.03
VTNP04004 HMGN2P35-201ENST00000412164 270 ntBASIC2.38□□□□□ -2.03
VTNP04004 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.38□□□□□ -2.03
VTNP04004 SNORD56-201ENST00000413522 71 ntBASIC2.38□□□□□ -2.03
VTNP04004 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.38□□□□□ -2.03
VTNP04004 AL365400.1-201ENST00000431854 640 ntBASIC2.38□□□□□ -2.03
VTNP04004 HMGN2P3-201ENST00000433603 273 ntBASIC2.38□□□□□ -2.03
VTNP04004 HMGN2P5-201ENST00000436882 273 ntBASIC2.38□□□□□ -2.03
VTNP04004 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.38□□□□□ -2.03
VTNP04004 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.38□□□□□ -2.03
VTNP04004 AC006026.2-201ENST00000457376 180 ntBASIC2.38□□□□□ -2.03
VTNP04004 RNU7-138P-201ENST00000459479 64 ntBASIC2.38□□□□□ -2.03
VTNP04004 UBL5P3-201ENST00000475112 231 ntBASIC2.38□□□□□ -2.03
VTNP04004 AC008628.2-201ENST00000502605 298 ntBASIC2.38□□□□□ -2.03
VTNP04004 SNORA43.2-201ENST00000516652 128 ntBASIC2.38□□□□□ -2.03
VTNP04004 RN7SKP256-201ENST00000517201 314 ntBASIC2.38□□□□□ -2.03
VTNP04004 AC104576.1-201ENST00000524225 88 ntBASIC2.38□□□□□ -2.03
VTNP04004 MIR3117-201ENST00000584034 78 ntBASIC2.38□□□□□ -2.03
VTNP04004 MIR3616-201ENST00000584070 92 ntBASIC2.38□□□□□ -2.03
VTNP04004 MIR6132-201ENST00000622083 109 ntBASIC2.38□□□□□ -2.03
VTNP04004 AC097372.5-201ENST00000623665 376 ntBASIC2.38□□□□□ -2.03
VTNP04004 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.38□□□□□ -2.03
VTNP04004 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.38□□□□□ -2.03
VTNP04004 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.37□□□□□ -2.03
VTNP04004 RNU6-78P-201ENST00000362897 107 ntBASIC2.37□□□□□ -2.03
VTNP04004 RNU6-942P-201ENST00000363002 107 ntBASIC2.37□□□□□ -2.03
VTNP04004 RNU6-827P-201ENST00000365553 106 ntBASIC2.37□□□□□ -2.03
VTNP04004 Y_RNA.414-201ENST00000384011 101 ntBASIC2.37□□□□□ -2.03
VTNP04004 RNU6-214P-201ENST00000384130 107 ntBASIC2.37□□□□□ -2.03
VTNP04004 AC138393.2-201ENST00000414742 246 ntBASIC2.37□□□□□ -2.03
VTNP04004 VN1R36P-201ENST00000414936 291 ntBASIC2.37□□□□□ -2.03
VTNP04004 RPL21P111-201ENST00000418453 477 ntBASIC2.37□□□□□ -2.03
VTNP04004 MTND4LP11-201ENST00000422184 280 ntBASIC2.37□□□□□ -2.03
VTNP04004 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.37□□□□□ -2.03
VTNP04004 AL445687.1-201ENST00000439946 251 ntBASIC2.37□□□□□ -2.03
VTNP04004 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.37□□□□□ -2.03
VTNP04004 MTND4LP16-201ENST00000440828 295 ntBASIC2.37□□□□□ -2.03
VTNP04004 AL353572.1-201ENST00000442490 417 ntBASIC2.37□□□□□ -2.03
VTNP04004 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.37□□□□□ -2.03
VTNP04004 AL441985.1-201ENST00000457727 251 ntBASIC2.37□□□□□ -2.03
VTNP04004 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.37□□□□□ -2.03
VTNP04004 MTCO2P30-201ENST00000503662 364 ntBASIC2.37□□□□□ -2.03
VTNP04004 AK3P2-201ENST00000507976 429 ntBASIC2.37□□□□□ -2.03
VTNP04004 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.37□□□□□ -2.03
VTNP04004 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
VTNP04004 AC103996.1-201ENST00000555468 102 ntBASIC2.37□□□□□ -2.03
VTNP04004 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.37□□□□□ -2.03
VTNP04004 MIR548S-201ENST00000581352 82 ntBASIC2.37□□□□□ -2.03
VTNP04004 AC005730.3-201ENST00000583067 366 ntBASIC2.37□□□□□ -2.03
VTNP04004 MIR3942-201ENST00000585264 109 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms