Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 Y_RNA.238-201ENST00000364441 102 ntBASIC0.93□□□□□ -2.26
APOEP02649 SNORD32B-201ENST00000364460 84 ntBASIC0.93□□□□□ -2.26
APOEP02649 MIR520A-201ENST00000384862 85 ntBASIC0.93□□□□□ -2.26
APOEP02649 ERHP2-201ENST00000402323 299 ntBASIC0.93□□□□□ -2.26
APOEP02649 RNU2-62P-201ENST00000410868 191 ntBASIC0.93□□□□□ -2.26
APOEP02649 AL161935.2-201ENST00000414627 60 ntBASIC0.93□□□□□ -2.26
APOEP02649 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.93□□□□□ -2.26
APOEP02649 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.93□□□□□ -2.26
APOEP02649 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.93□□□□□ -2.26
APOEP02649 ATP5EP1-201ENST00000510257 156 ntBASIC0.93□□□□□ -2.26
APOEP02649 RNU5F-2P-201ENST00000516066 82 ntBASIC0.93□□□□□ -2.26
APOEP02649 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.93□□□□□ -2.26
APOEP02649 CBX3P8-201ENST00000532412 525 ntBASIC0.93□□□□□ -2.26
APOEP02649 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.93□□□□□ -2.26
APOEP02649 AC023050.2-201ENST00000544968 387 ntBASIC0.93□□□□□ -2.26
APOEP02649 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.93□□□□□ -2.26
APOEP02649 AL136363.2-201ENST00000604173 851 ntBASIC0.93□□□□□ -2.26
APOEP02649 AL021368.1-201ENST00000607490 540 ntBASIC0.93□□□□□ -2.26
APOEP02649 AC084824.5-201ENST00000612009 413 ntBASIC0.93□□□□□ -2.26
APOEP02649 RNU6-1192P-201ENST00000612197 107 ntBASIC0.93□□□□□ -2.26
APOEP02649 RNU6-489P-201ENST00000618289 107 ntBASIC0.93□□□□□ -2.26
APOEP02649 AL359740.1-201ENST00000624340 592 ntBASIC0.93□□□□□ -2.26
APOEP02649 AL391516.1-201ENST00000554380 2449 ntBASIC0.93□□□□□ -2.26
APOEP02649 RNU6-960P-201ENST00000364056 120 ntBASIC0.92□□□□□ -2.26
APOEP02649 RNU2-7P-201ENST00000410794 178 ntBASIC0.92□□□□□ -2.26
APOEP02649 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.92□□□□□ -2.26
APOEP02649 CST2P1-201ENST00000425770 87 ntBASIC0.92□□□□□ -2.26
APOEP02649 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.92□□□□□ -2.26
APOEP02649 MTND1P30-201ENST00000441241 901 ntBASIC0.92□□□□□ -2.26
APOEP02649 PRPS1P1-201ENST00000445305 876 ntBASIC0.92□□□□□ -2.26
APOEP02649 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.92□□□□□ -2.26
APOEP02649 ART2BP-201ENST00000453501 499 ntBASIC0.92□□□□□ -2.26
APOEP02649 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.92□□□□□ -2.26
APOEP02649 snoU13.30-201ENST00000458951 104 ntBASIC0.92□□□□□ -2.26
APOEP02649 AC134050.1-201ENST00000495088 933 ntBASIC0.92□□□□□ -2.26
APOEP02649 MTCO3P9-201ENST00000506989 781 ntBASIC0.92□□□□□ -2.26
APOEP02649 UBL5P1-201ENST00000507979 193 ntBASIC0.92□□□□□ -2.26
APOEP02649 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.92□□□□□ -2.26
APOEP02649 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.92□□□□□ -2.26
APOEP02649 AL590229.1-201ENST00000603497 542 ntBASIC0.92□□□□□ -2.26
APOEP02649 AL158211.2-201ENST00000607282 395 ntBASIC0.92□□□□□ -2.26
APOEP02649 U6.42-201ENST00000618440 107 ntBASIC0.92□□□□□ -2.26
APOEP02649 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.92□□□□□ -2.26
APOEP02649 RNU6-433P-201ENST00000363216 104 ntBASIC0.91□□□□□ -2.26
APOEP02649 SNORD114-22-201ENST00000365423 72 ntBASIC0.91□□□□□ -2.26
APOEP02649 SNORD116.1-201ENST00000365628 92 ntBASIC0.91□□□□□ -2.26
APOEP02649 RNU6-1179P-201ENST00000384667 107 ntBASIC0.91□□□□□ -2.26
APOEP02649 AC123900.1-201ENST00000420390 96 ntBASIC0.91□□□□□ -2.26
APOEP02649 AC245047.4-201ENST00000433189 144 ntBASIC0.91□□□□□ -2.26
APOEP02649 AC099677.2-201ENST00000436385 175 ntBASIC0.91□□□□□ -2.26
APOEP02649 SNRPEP8-201ENST00000442866 260 ntBASIC0.91□□□□□ -2.26
APOEP02649 AC114982.1-201ENST00000469402 321 ntBASIC0.91□□□□□ -2.26
APOEP02649 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.91□□□□□ -2.26
APOEP02649 AC010587.2-201ENST00000511727 448 ntBASIC0.91□□□□□ -2.26
APOEP02649 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.91□□□□□ -2.26
APOEP02649 AC123904.2-201ENST00000548059 300 ntBASIC0.91□□□□□ -2.26
APOEP02649 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC0.91□□□□□ -2.26
APOEP02649 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.91□□□□□ -2.26
APOEP02649 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.91□□□□□ -2.26
APOEP02649 AC109446.2-201ENST00000567872 497 ntBASIC0.91□□□□□ -2.26
APOEP02649 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.91□□□□□ -2.26
APOEP02649 MIR4452-201ENST00000583004 71 ntBASIC0.91□□□□□ -2.26
APOEP02649 MZT1P2-201ENST00000604387 248 ntBASIC0.91□□□□□ -2.26
APOEP02649 AC211469.2-201ENST00000605461 205 ntBASIC0.91□□□□□ -2.26
APOEP02649 AP002782.1-201ENST00000623107 614 ntBASIC0.91□□□□□ -2.26
APOEP02649 OR4G3P-201ENST00000633500 913 ntBASIC0.91□□□□□ -2.26
APOEP02649 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
APOEP02649 RNU4-15P-201ENST00000362613 141 ntBASIC0.9□□□□□ -2.27
APOEP02649 Y_RNA.46-201ENST00000362695 102 ntBASIC0.9□□□□□ -2.27
APOEP02649 Y_RNA.465-201ENST00000384293 102 ntBASIC0.9□□□□□ -2.27
APOEP02649 RNU6-331P-201ENST00000384724 107 ntBASIC0.9□□□□□ -2.27
APOEP02649 MIR578-201ENST00000384828 96 ntBASIC0.9□□□□□ -2.27
APOEP02649 RAP1BP3-201ENST00000407180 549 ntBASIC0.9□□□□□ -2.27
APOEP02649 HMGN1P14-201ENST00000412459 517 ntBASIC0.9□□□□□ -2.27
APOEP02649 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.9□□□□□ -2.27
APOEP02649 FTH1P12-201ENST00000432137 551 ntBASIC0.9□□□□□ -2.27
APOEP02649 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.9□□□□□ -2.27
APOEP02649 AC007969.2-201ENST00000441891 191 ntBASIC0.9□□□□□ -2.27
APOEP02649 AC006026.2-201ENST00000457376 180 ntBASIC0.9□□□□□ -2.27
APOEP02649 RNU5A-4P-201ENST00000516588 111 ntBASIC0.9□□□□□ -2.27
APOEP02649 SUMO2P18-201ENST00000518873 252 ntBASIC0.9□□□□□ -2.27
APOEP02649 AL512310.8-201ENST00000550183 120 ntBASIC0.9□□□□□ -2.27
APOEP02649 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.9□□□□□ -2.27
APOEP02649 MTND4LP25-201ENST00000570218 163 ntBASIC0.9□□□□□ -2.27
APOEP02649 AL353778.1-201ENST00000603149 408 ntBASIC0.9□□□□□ -2.27
APOEP02649 AL158032.1-201ENST00000605401 106 ntBASIC0.9□□□□□ -2.27
APOEP02649 AC104073.3-201ENST00000610942 955 ntBASIC0.9□□□□□ -2.27
APOEP02649 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
APOEP02649 MIR8065-201ENST00000620577 100 ntBASIC0.9□□□□□ -2.27
APOEP02649 AC099654.5-201ENST00000636479 350 ntBASIC0.9□□□□□ -2.27
APOEP02649 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
APOEP02649 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.89□□□□□ -2.27
APOEP02649 AC010615.1-201ENST00000594254 1764 ntBASIC0.89□□□□□ -2.27
APOEP02649 Y_RNA.255-201ENST00000364581 97 ntBASIC0.89□□□□□ -2.27
APOEP02649 RNU6-1065P-201ENST00000384513 106 ntBASIC0.89□□□□□ -2.27
APOEP02649 RNU11-5P-201ENST00000391216 129 ntBASIC0.89□□□□□ -2.27
APOEP02649 EBAG9P1-201ENST00000418955 543 ntBASIC0.89□□□□□ -2.27
APOEP02649 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.89□□□□□ -2.27
APOEP02649 PGBD4P5-201ENST00000445958 426 ntBASIC0.89□□□□□ -2.27
APOEP02649 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms