Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 IMMP1LP2-201ENST00000552954 492 ntBASIC1.01□□□□□ -2.25
COL4A1P02462 AC090616.2-202ENST00000584248 222 ntBASIC1.01□□□□□ -2.25
COL4A1P02462 HMGN1P30-201ENST00000589286 268 ntBASIC1.01□□□□□ -2.25
COL4A1P02462 AC007363.1-201ENST00000604736 620 ntBASIC1.01□□□□□ -2.25
COL4A1P02462 AC108747.1-201ENST00000609508 535 ntBASIC1.01□□□□□ -2.25
COL4A1P02462 AL133173.2-201ENST00000614270 90 ntBASIC1.01□□□□□ -2.25
COL4A1P02462 AP002791.1-201ENST00000623291 381 ntBASIC1.01□□□□□ -2.25
COL4A1P02462 AC007494.3-201ENST00000624660 743 ntBASIC1.01□□□□□ -2.25
COL4A1P02462 SNORD56.2-201ENST00000363242 71 ntBASIC1□□□□□ -2.25
COL4A1P02462 RNY1P12-201ENST00000364251 105 ntBASIC1□□□□□ -2.25
COL4A1P02462 RNU6-61P-201ENST00000365528 109 ntBASIC1□□□□□ -2.25
COL4A1P02462 Y_RNA.534-201ENST00000384599 112 ntBASIC1□□□□□ -2.25
COL4A1P02462 MIR1-2-201ENST00000384961 85 ntBASIC1□□□□□ -2.25
COL4A1P02462 MIR934-201ENST00000401241 83 ntBASIC1□□□□□ -2.25
COL4A1P02462 AL031577.2-201ENST00000404133 280 ntBASIC1□□□□□ -2.25
COL4A1P02462 RNU2-8P-201ENST00000410727 190 ntBASIC1□□□□□ -2.25
COL4A1P02462 MTND2P18-201ENST00000419962 1030 ntBASIC1□□□□□ -2.25
COL4A1P02462 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1□□□□□ -2.25
COL4A1P02462 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1□□□□□ -2.25
COL4A1P02462 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1□□□□□ -2.25
COL4A1P02462 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1□□□□□ -2.25
COL4A1P02462 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1□□□□□ -2.25
COL4A1P02462 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1□□□□□ -2.25
COL4A1P02462 EPS15P1-201ENST00000448836 336 ntBASIC1□□□□□ -2.25
COL4A1P02462 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1□□□□□ -2.25
COL4A1P02462 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1□□□□□ -2.25
COL4A1P02462 SNORD42A-201ENST00000459584 64 ntBASIC1□□□□□ -2.25
COL4A1P02462 OR5B19P-201ENST00000531766 928 ntBASIC1□□□□□ -2.25
COL4A1P02462 ZNF321P-202ENST00000550843 495 ntBASIC1□□□□□ -2.25
COL4A1P02462 AL356432.3-201ENST00000568952 465 ntBASIC1□□□□□ -2.25
COL4A1P02462 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1□□□□□ -2.25
COL4A1P02462 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1□□□□□ -2.25
COL4A1P02462 AL022154.1-201ENST00000604698 785 ntBASIC1□□□□□ -2.25
COL4A1P02462 AP002360.4-201ENST00000606980 481 ntBASIC1□□□□□ -2.25
COL4A1P02462 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1□□□□□ -2.25
COL4A1P02462 AC104010.1-201ENST00000616889 150 ntBASIC1□□□□□ -2.25
COL4A1P02462 AC024581.2-201ENST00000619986 252 ntBASIC1□□□□□ -2.25
COL4A1P02462 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
COL4A1P02462 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1□□□□□ -2.25
COL4A1P02462 AC138393.1-203ENST00000327086 343 ntBASIC1□□□□□ -2.25
COL4A1P02462 RNU5E-5P-201ENST00000365379 116 ntBASIC1□□□□□ -2.25
COL4A1P02462 RNU6-1083P-201ENST00000384022 107 ntBASIC1□□□□□ -2.25
COL4A1P02462 RNU6-622P-201ENST00000384272 103 ntBASIC1□□□□□ -2.25
COL4A1P02462 RNU6-809P-201ENST00000384461 107 ntBASIC1□□□□□ -2.25
COL4A1P02462 MIR95-201ENST00000385072 81 ntBASIC1□□□□□ -2.25
COL4A1P02462 RPL23AP32-201ENST00000395315 459 ntBASIC1□□□□□ -2.25
COL4A1P02462 Y_RNA.623-201ENST00000411128 95 ntBASIC1□□□□□ -2.25
COL4A1P02462 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1□□□□□ -2.25
COL4A1P02462 EDDM3CP-201ENST00000415977 425 ntBASIC1□□□□□ -2.25
COL4A1P02462 HIGD1AP15-201ENST00000416198 280 ntBASIC1□□□□□ -2.25
COL4A1P02462 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1□□□□□ -2.25
COL4A1P02462 MTCO3P5-201ENST00000433620 714 ntBASIC1□□□□□ -2.25
COL4A1P02462 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1□□□□□ -2.25
COL4A1P02462 AL161651.1-201ENST00000440882 223 ntBASIC1□□□□□ -2.25
COL4A1P02462 MTND1P30-201ENST00000441241 901 ntBASIC1□□□□□ -2.25
COL4A1P02462 MTND5P2-201ENST00000442927 1142 ntBASIC1□□□□□ -2.25
COL4A1P02462 ZNF736P8Y-201ENST00000451913 669 ntBASIC1□□□□□ -2.25
COL4A1P02462 KATNBL1P6-201ENST00000453433 915 ntBASIC1□□□□□ -2.25
COL4A1P02462 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1□□□□□ -2.25
COL4A1P02462 AC023194.1-201ENST00000493084 308 ntBASIC1□□□□□ -2.25
COL4A1P02462 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1□□□□□ -2.25
COL4A1P02462 AKIRIN2P1-201ENST00000505898 352 ntBASIC1□□□□□ -2.25
COL4A1P02462 AC117522.1-201ENST00000509821 380 ntBASIC1□□□□□ -2.25
COL4A1P02462 RNU6-1129P-201ENST00000515964 104 ntBASIC1□□□□□ -2.25
COL4A1P02462 RNU7-51P-201ENST00000516560 62 ntBASIC1□□□□□ -2.25
COL4A1P02462 SNORA31.19-201ENST00000517079 126 ntBASIC1□□□□□ -2.25
COL4A1P02462 RNU6-1315P-201ENST00000517187 99 ntBASIC1□□□□□ -2.25
COL4A1P02462 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1□□□□□ -2.25
COL4A1P02462 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
COL4A1P02462 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
COL4A1P02462 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1□□□□□ -2.25
COL4A1P02462 MTATP6P24-201ENST00000576835 677 ntBASIC1□□□□□ -2.25
COL4A1P02462 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1□□□□□ -2.25
COL4A1P02462 AP000860.1-201ENST00000605250 559 ntBASIC1□□□□□ -2.25
COL4A1P02462 AC068276.1-201ENST00000605793 379 ntBASIC1□□□□□ -2.25
COL4A1P02462 MIR6134-201ENST00000617606 109 ntBASIC1□□□□□ -2.25
COL4A1P02462 AC007742.2-201ENST00000618226 398 ntBASIC1□□□□□ -2.25
COL4A1P02462 AC024940.5-201ENST00000622889 474 ntBASIC1□□□□□ -2.25
COL4A1P02462 AF246928.1-201ENST00000623768 87 ntBASIC1□□□□□ -2.25
COL4A1P02462 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1□□□□□ -2.25
COL4A1P02462 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.99□□□□□ -2.25
COL4A1P02462 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
COL4A1P02462 MIR558-201ENST00000384920 94 ntBASIC0.99□□□□□ -2.25
COL4A1P02462 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC0.99□□□□□ -2.25
COL4A1P02462 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC0.99□□□□□ -2.25
COL4A1P02462 MTND2P9-201ENST00000422293 931 ntBASIC0.99□□□□□ -2.25
COL4A1P02462 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.99□□□□□ -2.25
COL4A1P02462 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.99□□□□□ -2.25
COL4A1P02462 AL353706.1-201ENST00000436728 494 ntBASIC0.99□□□□□ -2.25
COL4A1P02462 AC107032.1-201ENST00000485945 480 ntBASIC0.99□□□□□ -2.25
COL4A1P02462 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.99□□□□□ -2.25
COL4A1P02462 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.99□□□□□ -2.25
COL4A1P02462 RNU6-914P-201ENST00000516749 109 ntBASIC0.99□□□□□ -2.25
COL4A1P02462 ACA59.2-201ENST00000517061 156 ntBASIC0.99□□□□□ -2.25
COL4A1P02462 AC090572.1-201ENST00000519251 160 ntBASIC0.99□□□□□ -2.25
COL4A1P02462 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.99□□□□□ -2.25
COL4A1P02462 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.99□□□□□ -2.25
COL4A1P02462 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.99□□□□□ -2.25
COL4A1P02462 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.99□□□□□ -2.25
COL4A1P02462 ZNF519P3-201ENST00000557158 1032 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms