Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC092574.1-201ENST00000609771 420 ntBASIC0.69□□□□□ -2.3
COL1A1P02452 AC099654.9-201ENST00000637055 678 ntBASIC0.69□□□□□ -2.3
COL1A1P02452 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
COL1A1P02452 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
COL1A1P02452 RNU6-968P-201ENST00000384076 107 ntBASIC0.68□□□□□ -2.3
COL1A1P02452 SNORA40C-201ENST00000391285 128 ntBASIC0.68□□□□□ -2.3
COL1A1P02452 PIGPP2-201ENST00000411569 458 ntBASIC0.68□□□□□ -2.3
COL1A1P02452 AC009518.2-201ENST00000418056 731 ntBASIC0.68□□□□□ -2.3
COL1A1P02452 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.68□□□□□ -2.3
COL1A1P02452 AL591043.1-201ENST00000432461 424 ntBASIC0.68□□□□□ -2.3
COL1A1P02452 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
COL1A1P02452 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.68□□□□□ -2.3
COL1A1P02452 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.68□□□□□ -2.3
COL1A1P02452 MTND1P36-201ENST00000522384 936 ntBASIC0.68□□□□□ -2.3
COL1A1P02452 DEFB108A-201ENST00000530110 222 ntBASIC0.68□□□□□ -2.3
COL1A1P02452 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.68□□□□□ -2.3
COL1A1P02452 AC146944.4-201ENST00000602697 718 ntBASIC0.68□□□□□ -2.3
COL1A1P02452 MTATP6P2-201ENST00000603319 678 ntBASIC0.68□□□□□ -2.3
COL1A1P02452 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.68□□□□□ -2.3
COL1A1P02452 AC093648.1-201ENST00000623546 606 ntBASIC0.68□□□□□ -2.3
COL1A1P02452 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC0.68□□□□□ -2.3
COL1A1P02452 MIR3529-201ENST00000637713 78 ntBASIC0.68□□□□□ -2.3
COL1A1P02452 FARSBP1-201ENST00000435808 1778 ntBASIC0.68□□□□□ -2.3
COL1A1P02452 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
COL1A1P02452 Y_RNA.99-201ENST00000363138 105 ntBASIC0.67□□□□□ -2.3
COL1A1P02452 Y_RNA.311-201ENST00000365068 96 ntBASIC0.67□□□□□ -2.3
COL1A1P02452 SNORA4.3-201ENST00000365564 137 ntBASIC0.67□□□□□ -2.3
COL1A1P02452 SNORA29-201ENST00000384183 140 ntBASIC0.67□□□□□ -2.3
COL1A1P02452 RNU6-843P-201ENST00000384454 104 ntBASIC0.67□□□□□ -2.3
COL1A1P02452 MIR186-201ENST00000384988 86 ntBASIC0.67□□□□□ -2.3
COL1A1P02452 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
COL1A1P02452 RNU6-360P-201ENST00000390944 104 ntBASIC0.67□□□□□ -2.3
COL1A1P02452 RNA5SP63-201ENST00000391225 112 ntBASIC0.67□□□□□ -2.3
COL1A1P02452 MIR1284-201ENST00000408337 120 ntBASIC0.67□□□□□ -2.3
COL1A1P02452 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.67□□□□□ -2.3
COL1A1P02452 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.67□□□□□ -2.3
COL1A1P02452 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.67□□□□□ -2.3
COL1A1P02452 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.67□□□□□ -2.3
COL1A1P02452 SNORA31.19-201ENST00000517079 126 ntBASIC0.67□□□□□ -2.3
COL1A1P02452 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.67□□□□□ -2.3
COL1A1P02452 AC093249.1-201ENST00000567049 203 ntBASIC0.67□□□□□ -2.3
COL1A1P02452 MIR1273C-201ENST00000578669 77 ntBASIC0.67□□□□□ -2.3
COL1A1P02452 MIR4293-201ENST00000584305 78 ntBASIC0.67□□□□□ -2.3
COL1A1P02452 MIR4653-201ENST00000585107 83 ntBASIC0.67□□□□□ -2.3
COL1A1P02452 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.67□□□□□ -2.3
COL1A1P02452 AC008507.2-201ENST00000588402 1176 ntBASIC0.67□□□□□ -2.3
COL1A1P02452 AC018926.1-201ENST00000616335 435 ntBASIC0.67□□□□□ -2.3
COL1A1P02452 AC123767.1-202ENST00000620407 817 ntBASIC0.67□□□□□ -2.3
COL1A1P02452 AC092656.1-203ENST00000624134 423 ntBASIC0.67□□□□□ -2.3
COL1A1P02452 AC099654.5-201ENST00000636479 350 ntBASIC0.67□□□□□ -2.3
COL1A1P02452 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.67□□□□□ -2.3
COL1A1P02452 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.67□□□□□ -2.3
COL1A1P02452 AC245060.5-201ENST00000610778 3293 ntBASIC0.67□□□□□ -2.3
COL1A1P02452 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.67□□□□□ -2.3
COL1A1P02452 MIR302D-201ENST00000362275 68 ntBASIC0.67□□□□□ -2.3
COL1A1P02452 RNU2-70P-201ENST00000410718 179 ntBASIC0.67□□□□□ -2.3
COL1A1P02452 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC0.67□□□□□ -2.3
COL1A1P02452 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.67□□□□□ -2.3
COL1A1P02452 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.67□□□□□ -2.3
COL1A1P02452 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.67□□□□□ -2.3
COL1A1P02452 EEF1E1P1-201ENST00000446998 430 ntBASIC0.67□□□□□ -2.3
COL1A1P02452 MTCO1P27-201ENST00000448269 226 ntBASIC0.67□□□□□ -2.3
COL1A1P02452 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.67□□□□□ -2.3
COL1A1P02452 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.67□□□□□ -2.3
COL1A1P02452 MTCO3P27-201ENST00000514397 196 ntBASIC0.67□□□□□ -2.3
COL1A1P02452 AC004817.2-201ENST00000561794 651 ntBASIC0.67□□□□□ -2.3
COL1A1P02452 AC012065.4-201ENST00000602445 679 ntBASIC0.67□□□□□ -2.3
COL1A1P02452 AC093788.1-201ENST00000609356 927 ntBASIC0.67□□□□□ -2.3
COL1A1P02452 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.67□□□□□ -2.3
COL1A1P02452 AP000943.4-201ENST00000622912 357 ntBASIC0.67□□□□□ -2.3
COL1A1P02452 Z69720.2-201ENST00000624755 279 ntBASIC0.67□□□□□ -2.3
COL1A1P02452 RNU6-166P-201ENST00000384371 107 ntBASIC0.66□□□□□ -2.3
COL1A1P02452 SNORA40.2-201ENST00000390847 128 ntBASIC0.66□□□□□ -2.3
COL1A1P02452 RPL23AP32-201ENST00000395315 459 ntBASIC0.66□□□□□ -2.3
COL1A1P02452 CBX3P9-201ENST00000402326 552 ntBASIC0.66□□□□□ -2.3
COL1A1P02452 MIR1912-201ENST00000410389 80 ntBASIC0.66□□□□□ -2.3
COL1A1P02452 AC069282.1-201ENST00000411911 526 ntBASIC0.66□□□□□ -2.3
COL1A1P02452 UBE2V1P10-201ENST00000414685 269 ntBASIC0.66□□□□□ -2.3
COL1A1P02452 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.66□□□□□ -2.3
COL1A1P02452 AC003071.1-201ENST00000451219 789 ntBASIC0.66□□□□□ -2.3
COL1A1P02452 RPL26P26-201ENST00000480251 434 ntBASIC0.66□□□□□ -2.3
COL1A1P02452 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.66□□□□□ -2.3
COL1A1P02452 SNORD116-28-201ENST00000516123 91 ntBASIC0.66□□□□□ -2.3
COL1A1P02452 RNU6-229P-201ENST00000516614 102 ntBASIC0.66□□□□□ -2.3
COL1A1P02452 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.66□□□□□ -2.3
COL1A1P02452 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.66□□□□□ -2.3
COL1A1P02452 AL136520.1-202ENST00000555494 763 ntBASIC0.66□□□□□ -2.3
COL1A1P02452 AC092325.1-201ENST00000566449 554 ntBASIC0.66□□□□□ -2.3
COL1A1P02452 AC136932.1-201ENST00000574771 208 ntBASIC0.66□□□□□ -2.3
COL1A1P02452 MIR3937-201ENST00000580135 106 ntBASIC0.66□□□□□ -2.3
COL1A1P02452 AC174048.1-201ENST00000603389 144 ntBASIC0.66□□□□□ -2.3
COL1A1P02452 AL358072.1-201ENST00000604156 575 ntBASIC0.66□□□□□ -2.3
COL1A1P02452 AC112220.3-201ENST00000605502 502 ntBASIC0.66□□□□□ -2.3
COL1A1P02452 AL158163.2-201ENST00000619110 700 ntBASIC0.66□□□□□ -2.3
COL1A1P02452 AC009269.6-201ENST00000621778 588 ntBASIC0.66□□□□□ -2.3
COL1A1P02452 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.66□□□□□ -2.3
COL1A1P02452 AC007792.1-201ENST00000623023 402 ntBASIC0.66□□□□□ -2.3
COL1A1P02452 AC099654.8-201ENST00000637757 681 ntBASIC0.66□□□□□ -2.3
COL1A1P02452 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
COL1A1P02452 RNU6-655P-201ENST00000362858 107 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms