Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.72□□□□□ -1.97
LDLRP01130 ELOCP24-201ENST00000456370 334 ntBASIC2.72□□□□□ -1.97
LDLRP01130 Y_RNA.638-201ENST00000459374 113 ntBASIC2.72□□□□□ -1.97
LDLRP01130 AC008571.1-201ENST00000467232 300 ntBASIC2.72□□□□□ -1.97
LDLRP01130 UBL5P3-201ENST00000475112 231 ntBASIC2.72□□□□□ -1.97
LDLRP01130 AC083906.5-201ENST00000503722 328 ntBASIC2.72□□□□□ -1.97
LDLRP01130 HIGD1AP13-201ENST00000509878 289 ntBASIC2.72□□□□□ -1.97
LDLRP01130 PTP4A1P4-201ENST00000512479 322 ntBASIC2.72□□□□□ -1.97
LDLRP01130 RN7SKP24-201ENST00000515888 284 ntBASIC2.72□□□□□ -1.97
LDLRP01130 SNORA9.3-201ENST00000516383 129 ntBASIC2.72□□□□□ -1.97
LDLRP01130 MIR892C-201ENST00000516410 77 ntBASIC2.72□□□□□ -1.97
LDLRP01130 RNU6-256P-201ENST00000516747 97 ntBASIC2.72□□□□□ -1.97
LDLRP01130 SNRPGP18-201ENST00000553000 214 ntBASIC2.72□□□□□ -1.97
LDLRP01130 LINC00933-203ENST00000559812 219 ntBASIC2.72□□□□□ -1.97
LDLRP01130 AC110491.1-201ENST00000562191 2010 ntBASIC2.72□□□□□ -1.97
LDLRP01130 AC138761.3-201ENST00000579993 334 ntBASIC2.72□□□□□ -1.97
LDLRP01130 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.72□□□□□ -1.97
LDLRP01130 U2.17-201ENST00000611454 95 ntBASIC2.72□□□□□ -1.97
LDLRP01130 AL031601.2-202ENST00000622650 282 ntBASIC2.72□□□□□ -1.97
LDLRP01130 AC022418.1-201ENST00000624118 445 ntBASIC2.72□□□□□ -1.97
LDLRP01130 MIR3199-2-201ENST00000636243 86 ntBASIC2.72□□□□□ -1.97
LDLRP01130 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.72□□□□□ -1.97
LDLRP01130 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
LDLRP01130 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.72□□□□□ -1.97
LDLRP01130 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.71□□□□□ -1.97
LDLRP01130 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.71□□□□□ -1.98
LDLRP01130 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.71□□□□□ -1.98
LDLRP01130 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
LDLRP01130 SNORD113-7-201ENST00000363762 77 ntBASIC2.71□□□□□ -1.98
LDLRP01130 Y_RNA.212-201ENST00000364177 102 ntBASIC2.71□□□□□ -1.98
LDLRP01130 SNORD14B-201ENST00000364533 90 ntBASIC2.71□□□□□ -1.98
LDLRP01130 RNU6-639P-201ENST00000384074 107 ntBASIC2.71□□□□□ -1.98
LDLRP01130 Y_RNA.605-201ENST00000410577 105 ntBASIC2.71□□□□□ -1.98
LDLRP01130 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.71□□□□□ -1.98
LDLRP01130 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.71□□□□□ -1.98
LDLRP01130 AL627311.1-201ENST00000431514 115 ntBASIC2.71□□□□□ -1.98
LDLRP01130 MTND1P17-201ENST00000448961 204 ntBASIC2.71□□□□□ -1.98
LDLRP01130 DYNLL1P5-201ENST00000467158 270 ntBASIC2.71□□□□□ -1.98
LDLRP01130 AC103975.1-201ENST00000482506 483 ntBASIC2.71□□□□□ -1.98
LDLRP01130 RPS27P26-201ENST00000494583 239 ntBASIC2.71□□□□□ -1.98
LDLRP01130 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.71□□□□□ -1.98
LDLRP01130 RNU6-581P-201ENST00000516214 105 ntBASIC2.71□□□□□ -1.98
LDLRP01130 RNU6-826P-201ENST00000516827 104 ntBASIC2.71□□□□□ -1.98
LDLRP01130 RNU6-1213P-201ENST00000517075 94 ntBASIC2.71□□□□□ -1.98
LDLRP01130 IMMP1LP2-201ENST00000552954 492 ntBASIC2.71□□□□□ -1.98
LDLRP01130 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.71□□□□□ -1.98
LDLRP01130 MIR4790-201ENST00000577799 79 ntBASIC2.71□□□□□ -1.98
LDLRP01130 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.71□□□□□ -1.98
LDLRP01130 AC023043.2-201ENST00000589678 1026 ntBASIC2.71□□□□□ -1.98
LDLRP01130 AC092747.3-201ENST00000603769 301 ntBASIC2.71□□□□□ -1.98
LDLRP01130 FAM157A-202ENST00000615155 405 ntBASIC2.71□□□□□ -1.98
LDLRP01130 AC103705.1-201ENST00000619013 241 ntBASIC2.71□□□□□ -1.98
LDLRP01130 AC098657.3-201ENST00000620434 263 ntBASIC2.71□□□□□ -1.98
LDLRP01130 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.71□□□□□ -1.98
LDLRP01130 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
LDLRP01130 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
LDLRP01130 MTND4P1-201ENST00000457501 1466 ntBASIC2.71□□□□□ -1.98
LDLRP01130 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
LDLRP01130 Y_RNA.5-201ENST00000362334 102 ntBASIC2.7□□□□□ -1.98
LDLRP01130 Y_RNA.112-201ENST00000363250 102 ntBASIC2.7□□□□□ -1.98
LDLRP01130 Y_RNA.135-201ENST00000363439 95 ntBASIC2.7□□□□□ -1.98
LDLRP01130 Y_RNA.148-201ENST00000363557 117 ntBASIC2.7□□□□□ -1.98
LDLRP01130 SNORD116-11-201ENST00000383882 92 ntBASIC2.7□□□□□ -1.98
LDLRP01130 MIR767-201ENST00000390228 109 ntBASIC2.7□□□□□ -1.98
LDLRP01130 RNA5SP354-201ENST00000391247 136 ntBASIC2.7□□□□□ -1.98
LDLRP01130 RNU2-3P-201ENST00000410144 191 ntBASIC2.7□□□□□ -1.98
LDLRP01130 RNU6-607P-201ENST00000411283 108 ntBASIC2.7□□□□□ -1.98
LDLRP01130 CYCSP33-201ENST00000414485 327 ntBASIC2.7□□□□□ -1.98
LDLRP01130 AL365496.1-201ENST00000426885 215 ntBASIC2.7□□□□□ -1.98
LDLRP01130 AC098831.1-201ENST00000440661 216 ntBASIC2.7□□□□□ -1.98
LDLRP01130 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.7□□□□□ -1.98
LDLRP01130 BTF3P15-201ENST00000455606 336 ntBASIC2.7□□□□□ -1.98
LDLRP01130 MTND5P22-201ENST00000458380 195 ntBASIC2.7□□□□□ -1.98
LDLRP01130 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.7□□□□□ -1.98
LDLRP01130 MTCYBP40-201ENST00000509390 1135 ntBASIC2.7□□□□□ -1.98
LDLRP01130 SMURF2P1-201ENST00000514992 481 ntBASIC2.7□□□□□ -1.98
LDLRP01130 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.7□□□□□ -1.98
LDLRP01130 Y_RNA.720-201ENST00000517166 92 ntBASIC2.7□□□□□ -1.98
LDLRP01130 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
LDLRP01130 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.7□□□□□ -1.98
LDLRP01130 AP000763.2-201ENST00000540641 163 ntBASIC2.7□□□□□ -1.98
LDLRP01130 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.7□□□□□ -1.98
LDLRP01130 AC021739.1-201ENST00000559631 174 ntBASIC2.7□□□□□ -1.98
LDLRP01130 AC100830.2-201ENST00000581636 240 ntBASIC2.7□□□□□ -1.98
LDLRP01130 CYP2C61P-201ENST00000604072 290 ntBASIC2.7□□□□□ -1.98
LDLRP01130 AC002044.1-201ENST00000606707 158 ntBASIC2.7□□□□□ -1.98
LDLRP01130 AL138726.1-201ENST00000614873 333 ntBASIC2.7□□□□□ -1.98
LDLRP01130 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.7□□□□□ -1.98
LDLRP01130 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
LDLRP01130 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
LDLRP01130 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
LDLRP01130 AC008669.1-201ENST00000565823 2178 ntBASIC2.7□□□□□ -1.98
LDLRP01130 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
LDLRP01130 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
LDLRP01130 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.69□□□□□ -1.98
LDLRP01130 RNU1-105P-201ENST00000363470 161 ntBASIC2.69□□□□□ -1.98
LDLRP01130 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
LDLRP01130 RNU6-310P-201ENST00000384655 107 ntBASIC2.69□□□□□ -1.98
LDLRP01130 MIR627-201ENST00000384979 97 ntBASIC2.69□□□□□ -1.98
LDLRP01130 EIF4E2P1-201ENST00000393781 255 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms