Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 U2.11-201ENST00000616345 191 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 U2.2-201ENST00000616535 191 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 U2.3-201ENST00000617785 191 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 U2.19-201ENST00000618602 191 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 RNU2-1-201ENST00000618664 191 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 U2.6-201ENST00000619225 191 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 U2.5-201ENST00000619465 191 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 U2.10-201ENST00000620268 191 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 AL359880.1-201ENST00000621879 266 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 AC097372.5-201ENST00000623665 376 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.24□□□□□ -2.05
PDGFBP01127 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.24□□□□□ -2.05
PDGFBP01127 AC027514.1-201ENST00000588561 1603 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
PDGFBP01127 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.23□□□□□ -2.05
PDGFBP01127 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
PDGFBP01127 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
PDGFBP01127 RNU1-72P-201ENST00000362976 153 ntBASIC2.23□□□□□ -2.05
PDGFBP01127 Y_RNA.796-201ENST00000364268 102 ntBASIC2.23□□□□□ -2.05
PDGFBP01127 Y_RNA.799-201ENST00000364992 102 ntBASIC2.23□□□□□ -2.05
PDGFBP01127 RNU4-66P-201ENST00000365199 138 ntBASIC2.23□□□□□ -2.05
PDGFBP01127 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
PDGFBP01127 DEFA7P-201ENST00000382676 285 ntBASIC2.23□□□□□ -2.05
PDGFBP01127 RNU6-72P-201ENST00000384285 79 ntBASIC2.23□□□□□ -2.05
PDGFBP01127 RNU6-843P-201ENST00000384454 104 ntBASIC2.23□□□□□ -2.05
PDGFBP01127 RNU1-57P-201ENST00000384491 166 ntBASIC2.23□□□□□ -2.05
PDGFBP01127 RNU6-1127P-201ENST00000384580 107 ntBASIC2.23□□□□□ -2.05
PDGFBP01127 MIR499A-201ENST00000384903 122 ntBASIC2.23□□□□□ -2.05
PDGFBP01127 MIR561-201ENST00000385216 97 ntBASIC2.23□□□□□ -2.05
PDGFBP01127 SNORA16.2-201ENST00000390991 127 ntBASIC2.23□□□□□ -2.05
PDGFBP01127 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.23□□□□□ -2.05
PDGFBP01127 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.23□□□□□ -2.05
PDGFBP01127 DNAJC19P4-201ENST00000440115 345 ntBASIC2.23□□□□□ -2.05
PDGFBP01127 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.23□□□□□ -2.05
PDGFBP01127 AC104136.1-201ENST00000512969 394 ntBASIC2.23□□□□□ -2.05
PDGFBP01127 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.23□□□□□ -2.05
PDGFBP01127 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.23□□□□□ -2.05
PDGFBP01127 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.23□□□□□ -2.05
PDGFBP01127 MTND4P7-201ENST00000523876 130 ntBASIC2.23□□□□□ -2.05
PDGFBP01127 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.23□□□□□ -2.05
PDGFBP01127 AC060766.3-201ENST00000591442 263 ntBASIC2.23□□□□□ -2.05
PDGFBP01127 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.23□□□□□ -2.05
PDGFBP01127 BNIP3P30-201ENST00000601184 574 ntBASIC2.23□□□□□ -2.05
PDGFBP01127 AC068790.6-201ENST00000602558 258 ntBASIC2.23□□□□□ -2.05
PDGFBP01127 AC002044.1-201ENST00000606707 158 ntBASIC2.23□□□□□ -2.05
PDGFBP01127 AC017083.3-201ENST00000609955 700 ntBASIC2.23□□□□□ -2.05
PDGFBP01127 uc_338.34-201ENST00000617467 174 ntBASIC2.23□□□□□ -2.05
PDGFBP01127 AC073534.2-201ENST00000620377 381 ntBASIC2.23□□□□□ -2.05
PDGFBP01127 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.23□□□□□ -2.05
PDGFBP01127 AC092881.1-201ENST00000638218 2733 ntBASIC2.23□□□□□ -2.05
PDGFBP01127 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
PDGFBP01127 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
PDGFBP01127 MIR378A-201ENST00000362177 66 ntBASIC2.22□□□□□ -2.05
PDGFBP01127 RNU4-12P-201ENST00000365233 139 ntBASIC2.22□□□□□ -2.05
PDGFBP01127 SNORD116-20-201ENST00000384529 92 ntBASIC2.22□□□□□ -2.05
PDGFBP01127 RNA5SP219-201ENST00000390940 113 ntBASIC2.22□□□□□ -2.05
PDGFBP01127 RNU6-1068P-201ENST00000410958 103 ntBASIC2.22□□□□□ -2.05
PDGFBP01127 CYCSP33-201ENST00000414485 327 ntBASIC2.22□□□□□ -2.05
PDGFBP01127 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.22□□□□□ -2.05
PDGFBP01127 Z82205.1-201ENST00000428456 297 ntBASIC2.22□□□□□ -2.05
PDGFBP01127 AL445646.1-201ENST00000431784 216 ntBASIC2.22□□□□□ -2.05
PDGFBP01127 CR769767.1-201ENST00000436337 346 ntBASIC2.22□□□□□ -2.05
PDGFBP01127 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.22□□□□□ -2.05
PDGFBP01127 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.22□□□□□ -2.05
PDGFBP01127 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.22□□□□□ -2.05
PDGFBP01127 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.22□□□□□ -2.05
PDGFBP01127 TPTE2P5-203ENST00000458118 728 ntBASIC2.22□□□□□ -2.05
PDGFBP01127 AC090515.1-201ENST00000465295 476 ntBASIC2.22□□□□□ -2.05
PDGFBP01127 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.22□□□□□ -2.05
PDGFBP01127 RNU2-69P-201ENST00000516061 100 ntBASIC2.22□□□□□ -2.05
PDGFBP01127 RNU6-1281P-201ENST00000516223 105 ntBASIC2.22□□□□□ -2.05
PDGFBP01127 RNU6-720P-201ENST00000516363 108 ntBASIC2.22□□□□□ -2.05
PDGFBP01127 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.22□□□□□ -2.05
PDGFBP01127 CR383656.8-201ENST00000549046 145 ntBASIC2.22□□□□□ -2.05
PDGFBP01127 AC021646.1-201ENST00000605469 484 ntBASIC2.22□□□□□ -2.05
PDGFBP01127 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
PDGFBP01127 AC005609.4-201ENST00000625071 447 ntBASIC2.22□□□□□ -2.05
PDGFBP01127 AC068137.4-201ENST00000638485 296 ntBASIC2.22□□□□□ -2.05
PDGFBP01127 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.21□□□□□ -2.05
PDGFBP01127 RBBP8P1-201ENST00000449447 1844 ntBASIC2.21□□□□□ -2.05
PDGFBP01127 RNU6-1322P-201ENST00000364309 107 ntBASIC2.21□□□□□ -2.06
PDGFBP01127 Y_RNA.324-201ENST00000365165 102 ntBASIC2.21□□□□□ -2.06
PDGFBP01127 RNU6-434P-201ENST00000384376 107 ntBASIC2.21□□□□□ -2.06
PDGFBP01127 MIR583-201ENST00000384846 75 ntBASIC2.21□□□□□ -2.06
PDGFBP01127 AL355497.1-201ENST00000406262 551 ntBASIC2.21□□□□□ -2.06
PDGFBP01127 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.21□□□□□ -2.06
PDGFBP01127 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.21□□□□□ -2.06
PDGFBP01127 SNRPGP7-201ENST00000469016 106 ntBASIC2.21□□□□□ -2.06
PDGFBP01127 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.21□□□□□ -2.06
PDGFBP01127 AC092989.1-201ENST00000481235 277 ntBASIC2.21□□□□□ -2.06
PDGFBP01127 RNU6-718P-201ENST00000516166 105 ntBASIC2.21□□□□□ -2.06
PDGFBP01127 SNORA40.12-201ENST00000516329 111 ntBASIC2.21□□□□□ -2.06
PDGFBP01127 Y_RNA.693-201ENST00000516641 110 ntBASIC2.21□□□□□ -2.06
PDGFBP01127 IGLV3-17-201ENST00000519099 244 ntBASIC2.21□□□□□ -2.06
PDGFBP01127 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.21□□□□□ -2.06
PDGFBP01127 AL137161.1-201ENST00000532231 390 ntBASIC2.21□□□□□ -2.06
PDGFBP01127 AC105137.2-201ENST00000569073 466 ntBASIC2.21□□□□□ -2.06
PDGFBP01127 AL713866.2-201ENST00000603579 219 ntBASIC2.21□□□□□ -2.06
PDGFBP01127 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
PDGFBP01127 AP001330.5-201ENST00000607176 411 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 435.4 ms