Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AC011476.5-201ENST00000615594 130 ntBASIC3.5□□□□□ -1.85
CNOT4O95628 AL354798.1-201ENST00000622505 329 ntBASIC3.5□□□□□ -1.85
CNOT4O95628 AC097372.5-201ENST00000623665 376 ntBASIC3.5□□□□□ -1.85
CNOT4O95628 U6.99-201ENST00000637524 83 ntBASIC3.5□□□□□ -1.85
CNOT4O95628 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.5□□□□□ -1.85
CNOT4O95628 AP003122.5-201ENST00000527668 3766 ntBASIC3.5□□□□□ -1.85
CNOT4O95628 AC091564.4-201ENST00000533934 2194 ntBASIC3.49□□□□□ -1.85
CNOT4O95628 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.49□□□□□ -1.85
CNOT4O95628 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CNOT4O95628 AC018555.1-201ENST00000567548 1980 ntBASIC3.49□□□□□ -1.85
CNOT4O95628 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
CNOT4O95628 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CNOT4O95628 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CNOT4O95628 RNU6-968P-201ENST00000384076 107 ntBASIC3.49□□□□□ -1.85
CNOT4O95628 RNU6-662P-201ENST00000384253 104 ntBASIC3.49□□□□□ -1.85
CNOT4O95628 Y_RNA.464-201ENST00000384282 110 ntBASIC3.49□□□□□ -1.85
CNOT4O95628 RNU6-378P-201ENST00000384324 107 ntBASIC3.49□□□□□ -1.85
CNOT4O95628 RHEBP3-201ENST00000411920 351 ntBASIC3.49□□□□□ -1.85
CNOT4O95628 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.49□□□□□ -1.85
CNOT4O95628 AP000907.1-201ENST00000428428 510 ntBASIC3.49□□□□□ -1.85
CNOT4O95628 AC009296.1-201ENST00000443146 155 ntBASIC3.49□□□□□ -1.85
CNOT4O95628 RPL37P4-201ENST00000448908 268 ntBASIC3.49□□□□□ -1.85
CNOT4O95628 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.49□□□□□ -1.85
CNOT4O95628 RAC1P5-201ENST00000512182 576 ntBASIC3.49□□□□□ -1.85
CNOT4O95628 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.49□□□□□ -1.85
CNOT4O95628 AP006245.1-201ENST00000522549 120 ntBASIC3.49□□□□□ -1.85
CNOT4O95628 MRPS36P4-201ENST00000534436 298 ntBASIC3.49□□□□□ -1.85
CNOT4O95628 CBX3P4-201ENST00000538909 354 ntBASIC3.49□□□□□ -1.85
CNOT4O95628 AL391261.3-201ENST00000557194 520 ntBASIC3.49□□□□□ -1.85
CNOT4O95628 MIR4643-201ENST00000577473 78 ntBASIC3.49□□□□□ -1.85
CNOT4O95628 AL161756.2-201ENST00000604597 246 ntBASIC3.49□□□□□ -1.85
CNOT4O95628 AC084757.4-201ENST00000616350 526 ntBASIC3.49□□□□□ -1.85
CNOT4O95628 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.49□□□□□ -1.85
CNOT4O95628 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CNOT4O95628 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CNOT4O95628 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CNOT4O95628 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
CNOT4O95628 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CNOT4O95628 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.48□□□□□ -1.85
CNOT4O95628 RNU6-545P-201ENST00000362681 104 ntBASIC3.48□□□□□ -1.85
CNOT4O95628 RNU4-90P-201ENST00000362773 141 ntBASIC3.48□□□□□ -1.85
CNOT4O95628 RNA5SP399-201ENST00000364003 117 ntBASIC3.48□□□□□ -1.85
CNOT4O95628 Y_RNA.199-201ENST00000364014 102 ntBASIC3.48□□□□□ -1.85
CNOT4O95628 RNU6-17P-201ENST00000384245 107 ntBASIC3.48□□□□□ -1.85
CNOT4O95628 RNU6-18P-201ENST00000384527 107 ntBASIC3.48□□□□□ -1.85
CNOT4O95628 MIR767-201ENST00000390228 109 ntBASIC3.48□□□□□ -1.85
CNOT4O95628 AL033519.2-201ENST00000403958 392 ntBASIC3.48□□□□□ -1.85
CNOT4O95628 U3.37-201ENST00000408528 213 ntBASIC3.48□□□□□ -1.85
CNOT4O95628 HMGB1P37-201ENST00000439613 609 ntBASIC3.48□□□□□ -1.85
CNOT4O95628 NDUFB4P10-201ENST00000452541 359 ntBASIC3.48□□□□□ -1.85
CNOT4O95628 RPL23AP49-201ENST00000492925 468 ntBASIC3.48□□□□□ -1.85
CNOT4O95628 AC026726.1-201ENST00000512859 601 ntBASIC3.48□□□□□ -1.85
CNOT4O95628 RNA5SP179-201ENST00000517284 121 ntBASIC3.48□□□□□ -1.85
CNOT4O95628 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.48□□□□□ -1.85
CNOT4O95628 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.48□□□□□ -1.85
CNOT4O95628 RPL23AP88-201ENST00000605759 454 ntBASIC3.48□□□□□ -1.85
CNOT4O95628 AL121772.2-201ENST00000614331 297 ntBASIC3.48□□□□□ -1.85
CNOT4O95628 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CNOT4O95628 TNPO1P3-201ENST00000436471 2662 ntBASIC3.48□□□□□ -1.85
CNOT4O95628 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CNOT4O95628 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.48□□□□□ -1.85
CNOT4O95628 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
CNOT4O95628 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.47□□□□□ -1.85
CNOT4O95628 ZNF826P-207ENST00000622273 1910 ntBASIC3.47□□□□□ -1.85
CNOT4O95628 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
CNOT4O95628 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.47□□□□□ -1.85
CNOT4O95628 MIR411-201ENST00000362239 96 ntBASIC3.47□□□□□ -1.85
CNOT4O95628 RNA5SP124-201ENST00000362739 110 ntBASIC3.47□□□□□ -1.85
CNOT4O95628 RNU6-527P-201ENST00000363425 104 ntBASIC3.47□□□□□ -1.85
CNOT4O95628 SNORD63-201ENST00000384262 68 ntBASIC3.47□□□□□ -1.85
CNOT4O95628 SNORA3.3-201ENST00000408712 125 ntBASIC3.47□□□□□ -1.85
CNOT4O95628 RNA5SP31-201ENST00000411144 127 ntBASIC3.47□□□□□ -1.85
CNOT4O95628 RAB9AP3-201ENST00000412737 573 ntBASIC3.47□□□□□ -1.85
CNOT4O95628 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.47□□□□□ -1.85
CNOT4O95628 AL714022.1-201ENST00000439897 151 ntBASIC3.47□□□□□ -1.85
CNOT4O95628 CYCSP32-201ENST00000440548 321 ntBASIC3.47□□□□□ -1.85
CNOT4O95628 RAB9AP1-201ENST00000449393 573 ntBASIC3.47□□□□□ -1.85
CNOT4O95628 AL353705.4-201ENST00000449661 238 ntBASIC3.47□□□□□ -1.85
CNOT4O95628 HSPE1P25-201ENST00000455484 251 ntBASIC3.47□□□□□ -1.85
CNOT4O95628 AC006026.2-201ENST00000457376 180 ntBASIC3.47□□□□□ -1.85
CNOT4O95628 RNU7-120P-201ENST00000459334 63 ntBASIC3.47□□□□□ -1.85
CNOT4O95628 RPL23AP75-201ENST00000491601 451 ntBASIC3.47□□□□□ -1.85
CNOT4O95628 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.47□□□□□ -1.85
CNOT4O95628 SNORA25.14-201ENST00000516481 132 ntBASIC3.47□□□□□ -1.85
CNOT4O95628 SNORA43.2-201ENST00000516652 128 ntBASIC3.47□□□□□ -1.85
CNOT4O95628 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.47□□□□□ -1.85
CNOT4O95628 AP004607.1-201ENST00000524456 203 ntBASIC3.47□□□□□ -1.85
CNOT4O95628 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.47□□□□□ -1.85
CNOT4O95628 GNRHR2P1-201ENST00000555315 631 ntBASIC3.47□□□□□ -1.85
CNOT4O95628 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.47□□□□□ -1.85
CNOT4O95628 AC091167.4-201ENST00000605079 184 ntBASIC3.47□□□□□ -1.85
CNOT4O95628 AC019176.2-201ENST00000611579 315 ntBASIC3.47□□□□□ -1.85
CNOT4O95628 RMST_6.1-201ENST00000611980 203 ntBASIC3.47□□□□□ -1.85
CNOT4O95628 AC012314.7-201ENST00000619693 93 ntBASIC3.47□□□□□ -1.85
CNOT4O95628 U7.8-201ENST00000619968 63 ntBASIC3.47□□□□□ -1.85
CNOT4O95628 AL773545.4-201ENST00000637262 310 ntBASIC3.47□□□□□ -1.85
CNOT4O95628 AC241585.2-209ENST00000638217 143 ntBASIC3.47□□□□□ -1.85
CNOT4O95628 AL513478.4-201ENST00000641636 310 ntBASIC3.47□□□□□ -1.85
CNOT4O95628 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.47□□□□□ -1.85
CNOT4O95628 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms