Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AL590632.1-201ENST00000424289 371 ntBASIC2.54□□□□□ -2
GPC4O75487 SNAP23P1-201ENST00000433229 246 ntBASIC2.54□□□□□ -2
GPC4O75487 RPL32P28-201ENST00000443577 397 ntBASIC2.54□□□□□ -2
GPC4O75487 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.54□□□□□ -2
GPC4O75487 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.54□□□□□ -2
GPC4O75487 RNU6-1088P-201ENST00000516850 104 ntBASIC2.54□□□□□ -2
GPC4O75487 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.54□□□□□ -2
GPC4O75487 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.54□□□□□ -2
GPC4O75487 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.54□□□□□ -2
GPC4O75487 AC026371.1-201ENST00000551867 419 ntBASIC2.54□□□□□ -2
GPC4O75487 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.54□□□□□ -2
GPC4O75487 AC105137.2-201ENST00000569073 466 ntBASIC2.54□□□□□ -2
GPC4O75487 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.54□□□□□ -2
GPC4O75487 AC100830.2-201ENST00000581636 240 ntBASIC2.54□□□□□ -2
GPC4O75487 AC073410.2-201ENST00000603240 332 ntBASIC2.54□□□□□ -2
GPC4O75487 AC069294.1-201ENST00000608397 350 ntBASIC2.54□□□□□ -2
GPC4O75487 uc_338.15-201ENST00000615470 191 ntBASIC2.54□□□□□ -2
GPC4O75487 AC009233.1-201ENST00000616477 371 ntBASIC2.54□□□□□ -2
GPC4O75487 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.54□□□□□ -2
GPC4O75487 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.54□□□□□ -2
GPC4O75487 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
GPC4O75487 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
GPC4O75487 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.54□□□□□ -2
GPC4O75487 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.53□□□□□ -2
GPC4O75487 MIR6073-201ENST00000352083 89 ntBASIC2.53□□□□□ -2
GPC4O75487 RNU6-214P-201ENST00000384130 107 ntBASIC2.53□□□□□ -2
GPC4O75487 RNU6-43P-201ENST00000384302 107 ntBASIC2.53□□□□□ -2
GPC4O75487 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.53□□□□□ -2
GPC4O75487 AIMP1P2-201ENST00000425294 312 ntBASIC2.53□□□□□ -2
GPC4O75487 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.53□□□□□ -2
GPC4O75487 AC104389.3-201ENST00000445629 235 ntBASIC2.53□□□□□ -2
GPC4O75487 AL109933.2-201ENST00000452651 260 ntBASIC2.53□□□□□ -2
GPC4O75487 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.53□□□□□ -2
GPC4O75487 RNU6-1037P-201ENST00000459571 107 ntBASIC2.53□□□□□ -2
GPC4O75487 RPS27P27-201ENST00000498779 255 ntBASIC2.53□□□□□ -2
GPC4O75487 RNU4-49P-201ENST00000516080 140 ntBASIC2.53□□□□□ -2
GPC4O75487 RNU6-864P-201ENST00000516256 108 ntBASIC2.53□□□□□ -2
GPC4O75487 RNU2-53P-201ENST00000516257 147 ntBASIC2.53□□□□□ -2
GPC4O75487 RNA5SP82-201ENST00000516707 92 ntBASIC2.53□□□□□ -2
GPC4O75487 RNU6-273P-201ENST00000516937 96 ntBASIC2.53□□□□□ -2
GPC4O75487 AC109329.1-201ENST00000518744 317 ntBASIC2.53□□□□□ -2
GPC4O75487 VN1R107P-201ENST00000601784 209 ntBASIC2.53□□□□□ -2
GPC4O75487 AC009248.2-201ENST00000619826 254 ntBASIC2.53□□□□□ -2
GPC4O75487 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
GPC4O75487 MTND4P23-201ENST00000447723 1363 ntBASIC2.52□□□□□ -2.01
GPC4O75487 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
GPC4O75487 RNU6-212P-201ENST00000362642 104 ntBASIC2.52□□□□□ -2.01
GPC4O75487 Y_RNA.212-201ENST00000364177 102 ntBASIC2.52□□□□□ -2.01
GPC4O75487 U3.13-201ENST00000364804 214 ntBASIC2.52□□□□□ -2.01
GPC4O75487 SNORD32A-201ENST00000364805 84 ntBASIC2.52□□□□□ -2.01
GPC4O75487 RNU6-1032P-201ENST00000384100 107 ntBASIC2.52□□□□□ -2.01
GPC4O75487 RNU6-1072P-201ENST00000384703 107 ntBASIC2.52□□□□□ -2.01
GPC4O75487 RNU6-443P-201ENST00000384780 107 ntBASIC2.52□□□□□ -2.01
GPC4O75487 MT-TL1-201ENST00000386347 75 ntBASIC2.52□□□□□ -2.01
GPC4O75487 AC009161.1-201ENST00000417306 376 ntBASIC2.52□□□□□ -2.01
GPC4O75487 AL139413.1-201ENST00000421309 217 ntBASIC2.52□□□□□ -2.01
GPC4O75487 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.52□□□□□ -2.01
GPC4O75487 ARL5AP4-201ENST00000430731 512 ntBASIC2.52□□□□□ -2.01
GPC4O75487 RPS12P2-201ENST00000439728 269 ntBASIC2.52□□□□□ -2.01
GPC4O75487 MTND1P11-201ENST00000456661 876 ntBASIC2.52□□□□□ -2.01
GPC4O75487 RNU7-187P-201ENST00000458985 68 ntBASIC2.52□□□□□ -2.01
GPC4O75487 AC080013.2-201ENST00000460866 323 ntBASIC2.52□□□□□ -2.01
GPC4O75487 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.52□□□□□ -2.01
GPC4O75487 SNRPGP7-201ENST00000469016 106 ntBASIC2.52□□□□□ -2.01
GPC4O75487 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.52□□□□□ -2.01
GPC4O75487 AC091874.1-201ENST00000511402 339 ntBASIC2.52□□□□□ -2.01
GPC4O75487 RNA5SP402-201ENST00000517148 110 ntBASIC2.52□□□□□ -2.01
GPC4O75487 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.52□□□□□ -2.01
GPC4O75487 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.52□□□□□ -2.01
GPC4O75487 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.52□□□□□ -2.01
GPC4O75487 MIR5571-201ENST00000577998 113 ntBASIC2.52□□□□□ -2.01
GPC4O75487 MIR3616-201ENST00000584070 92 ntBASIC2.52□□□□□ -2.01
GPC4O75487 AL713866.2-201ENST00000603579 219 ntBASIC2.52□□□□□ -2.01
GPC4O75487 AC009033.1-201ENST00000624279 431 ntBASIC2.52□□□□□ -2.01
GPC4O75487 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
GPC4O75487 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.52□□□□□ -2.01
GPC4O75487 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
GPC4O75487 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.51□□□□□ -2.01
GPC4O75487 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.51□□□□□ -2.01
GPC4O75487 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
GPC4O75487 SNORD62.1-201ENST00000362541 86 ntBASIC2.51□□□□□ -2.01
GPC4O75487 Y_RNA.135-201ENST00000363439 95 ntBASIC2.51□□□□□ -2.01
GPC4O75487 RNU6-1285P-201ENST00000363480 105 ntBASIC2.51□□□□□ -2.01
GPC4O75487 RNU6-1317P-201ENST00000364582 104 ntBASIC2.51□□□□□ -2.01
GPC4O75487 RNA5SP125-201ENST00000364843 120 ntBASIC2.51□□□□□ -2.01
GPC4O75487 Y_RNA.301-201ENST00000364990 103 ntBASIC2.51□□□□□ -2.01
GPC4O75487 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
GPC4O75487 RNU6-1222P-201ENST00000384615 107 ntBASIC2.51□□□□□ -2.01
GPC4O75487 RNU6-95P-201ENST00000384697 107 ntBASIC2.51□□□□□ -2.01
GPC4O75487 RNU6-325P-201ENST00000411132 105 ntBASIC2.51□□□□□ -2.01
GPC4O75487 UBE2V1P4-201ENST00000425374 344 ntBASIC2.51□□□□□ -2.01
GPC4O75487 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.51□□□□□ -2.01
GPC4O75487 RPL9P9-202ENST00000466501 579 ntBASIC2.51□□□□□ -2.01
GPC4O75487 AL121594.1-201ENST00000475906 575 ntBASIC2.51□□□□□ -2.01
GPC4O75487 TRBVA-201ENST00000498804 316 ntBASIC2.51□□□□□ -2.01
GPC4O75487 AC008526.1-201ENST00000509149 338 ntBASIC2.51□□□□□ -2.01
GPC4O75487 AC010486.1-201ENST00000511793 424 ntBASIC2.51□□□□□ -2.01
GPC4O75487 RN7SKP256-201ENST00000517201 314 ntBASIC2.51□□□□□ -2.01
GPC4O75487 RNU1-104P-201ENST00000517280 175 ntBASIC2.51□□□□□ -2.01
GPC4O75487 AP000889.2-201ENST00000532684 490 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms