Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 SRP72P2-201ENST00000344851 1979 ntBASIC4□□□□□ -1.77
VAMP4O75379 AC090740.1-201ENST00000623193 2262 ntBASIC3.99□□□□□ -1.77
VAMP4O75379 RNU6-105P-201ENST00000363909 104 ntBASIC3.99□□□□□ -1.77
VAMP4O75379 RNU6-611P-201ENST00000384276 104 ntBASIC3.99□□□□□ -1.77
VAMP4O75379 MIR628-201ENST00000385229 95 ntBASIC3.99□□□□□ -1.77
VAMP4O75379 SNORA12.2-201ENST00000391040 156 ntBASIC3.99□□□□□ -1.77
VAMP4O75379 MIR1302-6-201ENST00000408466 90 ntBASIC3.99□□□□□ -1.77
VAMP4O75379 AP000275.1-201ENST00000411943 390 ntBASIC3.99□□□□□ -1.77
VAMP4O75379 AL512844.2-201ENST00000433990 593 ntBASIC3.99□□□□□ -1.77
VAMP4O75379 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.99□□□□□ -1.77
VAMP4O75379 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.99□□□□□ -1.77
VAMP4O75379 AC124916.1-201ENST00000444020 547 ntBASIC3.99□□□□□ -1.77
VAMP4O75379 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.99□□□□□ -1.77
VAMP4O75379 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.99□□□□□ -1.77
VAMP4O75379 AC008885.1-201ENST00000514930 301 ntBASIC3.99□□□□□ -1.77
VAMP4O75379 RNA5SP217-201ENST00000515959 91 ntBASIC3.99□□□□□ -1.77
VAMP4O75379 SNORA31.18-201ENST00000517043 134 ntBASIC3.99□□□□□ -1.77
VAMP4O75379 AC034114.1-201ENST00000520293 285 ntBASIC3.99□□□□□ -1.77
VAMP4O75379 CASP1P1-201ENST00000526345 212 ntBASIC3.99□□□□□ -1.77
VAMP4O75379 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.99□□□□□ -1.77
VAMP4O75379 MIR3186-201ENST00000577404 85 ntBASIC3.99□□□□□ -1.77
VAMP4O75379 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.99□□□□□ -1.77
VAMP4O75379 MIR3200-201ENST00000580767 85 ntBASIC3.99□□□□□ -1.77
VAMP4O75379 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.99□□□□□ -1.77
VAMP4O75379 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.99□□□□□ -1.77
VAMP4O75379 U6.104-201ENST00000637979 90 ntBASIC3.99□□□□□ -1.77
VAMP4O75379 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
VAMP4O75379 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
VAMP4O75379 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
VAMP4O75379 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.99□□□□□ -1.77
VAMP4O75379 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
VAMP4O75379 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.98□□□□□ -1.77
VAMP4O75379 Y_RNA.447-201ENST00000384184 113 ntBASIC3.98□□□□□ -1.77
VAMP4O75379 MIR518D-201ENST00000385014 87 ntBASIC3.98□□□□□ -1.77
VAMP4O75379 SNORD67-201ENST00000390833 111 ntBASIC3.98□□□□□ -1.77
VAMP4O75379 MIR190B-201ENST00000401119 79 ntBASIC3.98□□□□□ -1.77
VAMP4O75379 RN7SKP220-201ENST00000410611 288 ntBASIC3.98□□□□□ -1.77
VAMP4O75379 RPL26P27-201ENST00000414397 437 ntBASIC3.98□□□□□ -1.77
VAMP4O75379 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.98□□□□□ -1.77
VAMP4O75379 RNU1-103P-201ENST00000516502 125 ntBASIC3.98□□□□□ -1.77
VAMP4O75379 SNORA43.2-201ENST00000516652 128 ntBASIC3.98□□□□□ -1.77
VAMP4O75379 RNU6-897P-201ENST00000517135 105 ntBASIC3.98□□□□□ -1.77
VAMP4O75379 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.98□□□□□ -1.77
VAMP4O75379 AMZ2P1-203ENST00000565833 850 ntBASIC3.98□□□□□ -1.77
VAMP4O75379 AC090517.1-201ENST00000569307 266 ntBASIC3.98□□□□□ -1.77
VAMP4O75379 AC099778.2-201ENST00000610904 211 ntBASIC3.98□□□□□ -1.77
VAMP4O75379 AC002546.1-201ENST00000588041 2504 ntBASIC3.98□□□□□ -1.77
VAMP4O75379 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VAMP4O75379 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.98□□□□□ -1.77
VAMP4O75379 AP000560.1-201ENST00000624150 1937 ntBASIC3.97□□□□□ -1.77
VAMP4O75379 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VAMP4O75379 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
VAMP4O75379 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VAMP4O75379 Y_RNA.27-201ENST00000362540 103 ntBASIC3.97□□□□□ -1.77
VAMP4O75379 RNU1-76P-201ENST00000362903 159 ntBASIC3.97□□□□□ -1.77
VAMP4O75379 Y_RNA.257-201ENST00000364596 102 ntBASIC3.97□□□□□ -1.77
VAMP4O75379 Y_RNA.461-201ENST00000384263 103 ntBASIC3.97□□□□□ -1.77
VAMP4O75379 SNORD15B-201ENST00000384714 146 ntBASIC3.97□□□□□ -1.77
VAMP4O75379 RNU1-101P-201ENST00000391171 127 ntBASIC3.97□□□□□ -1.77
VAMP4O75379 BTF3L4P2-201ENST00000392798 346 ntBASIC3.97□□□□□ -1.77
VAMP4O75379 AL591034.1-201ENST00000407447 340 ntBASIC3.97□□□□□ -1.77
VAMP4O75379 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.97□□□□□ -1.77
VAMP4O75379 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.97□□□□□ -1.77
VAMP4O75379 AC098831.1-201ENST00000440661 216 ntBASIC3.97□□□□□ -1.77
VAMP4O75379 Z98949.2-201ENST00000440996 144 ntBASIC3.97□□□□□ -1.77
VAMP4O75379 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.97□□□□□ -1.77
VAMP4O75379 SNORD127-201ENST00000458892 86 ntBASIC3.97□□□□□ -1.77
VAMP4O75379 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3.97□□□□□ -1.77
VAMP4O75379 SNORA40.15-201ENST00000516884 107 ntBASIC3.97□□□□□ -1.77
VAMP4O75379 MIR2355-201ENST00000517199 87 ntBASIC3.97□□□□□ -1.77
VAMP4O75379 AP004607.1-201ENST00000524456 203 ntBASIC3.97□□□□□ -1.77
VAMP4O75379 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VAMP4O75379 AC005357.1-201ENST00000588399 301 ntBASIC3.97□□□□□ -1.77
VAMP4O75379 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.97□□□□□ -1.77
VAMP4O75379 AC078899.3-201ENST00000599065 212 ntBASIC3.97□□□□□ -1.77
VAMP4O75379 SNORA50A-202ENST00000629536 136 ntBASIC3.97□□□□□ -1.77
VAMP4O75379 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
VAMP4O75379 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.96□□□□□ -1.77
VAMP4O75379 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.96□□□□□ -1.78
VAMP4O75379 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.96□□□□□ -1.78
VAMP4O75379 AC073325.2-201ENST00000339545 159 ntBASIC3.96□□□□□ -1.78
VAMP4O75379 Y_RNA.64-201ENST00000362845 102 ntBASIC3.96□□□□□ -1.78
VAMP4O75379 Y_RNA.123-201ENST00000363338 102 ntBASIC3.96□□□□□ -1.78
VAMP4O75379 Y_RNA.183-201ENST00000363882 113 ntBASIC3.96□□□□□ -1.78
VAMP4O75379 U3.13-201ENST00000364804 214 ntBASIC3.96□□□□□ -1.78
VAMP4O75379 Y_RNA.376-201ENST00000365638 108 ntBASIC3.96□□□□□ -1.78
VAMP4O75379 Y_RNA.471-201ENST00000384312 102 ntBASIC3.96□□□□□ -1.78
VAMP4O75379 MT-TW-201ENST00000387382 68 ntBASIC3.96□□□□□ -1.78
VAMP4O75379 MT-TR-201ENST00000387439 65 ntBASIC3.96□□□□□ -1.78
VAMP4O75379 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VAMP4O75379 MIR888-201ENST00000401186 77 ntBASIC3.96□□□□□ -1.78
VAMP4O75379 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.96□□□□□ -1.78
VAMP4O75379 AC245291.1-201ENST00000419501 328 ntBASIC3.96□□□□□ -1.78
VAMP4O75379 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.96□□□□□ -1.78
VAMP4O75379 RPL23AP22-201ENST00000437556 453 ntBASIC3.96□□□□□ -1.78
VAMP4O75379 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.96□□□□□ -1.78
VAMP4O75379 AL513124.1-201ENST00000450410 614 ntBASIC3.96□□□□□ -1.78
VAMP4O75379 RNU6-1132P-201ENST00000459214 107 ntBASIC3.96□□□□□ -1.78
VAMP4O75379 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.96□□□□□ -1.78
VAMP4O75379 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms