Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 RNU7-187P-201ENST00000458985 68 ntBASIC2.81□□□□□ -1.96
TSPAN3O60637 RNU6-329P-201ENST00000459618 107 ntBASIC2.81□□□□□ -1.96
TSPAN3O60637 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.81□□□□□ -1.96
TSPAN3O60637 RNU6-1088P-201ENST00000516850 104 ntBASIC2.81□□□□□ -1.96
TSPAN3O60637 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.81□□□□□ -1.96
TSPAN3O60637 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.81□□□□□ -1.96
TSPAN3O60637 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.81□□□□□ -1.96
TSPAN3O60637 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.81□□□□□ -1.96
TSPAN3O60637 AC105245.1-201ENST00000581934 244 ntBASIC2.81□□□□□ -1.96
TSPAN3O60637 AC023043.2-201ENST00000589678 1026 ntBASIC2.81□□□□□ -1.96
TSPAN3O60637 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
TSPAN3O60637 AC069294.1-201ENST00000608397 350 ntBASIC2.81□□□□□ -1.96
TSPAN3O60637 uc_338.15-201ENST00000615470 191 ntBASIC2.81□□□□□ -1.96
TSPAN3O60637 DUXAP9-208ENST00000622815 614 ntBASIC2.81□□□□□ -1.96
TSPAN3O60637 RNU4-82P-201ENST00000362443 140 ntBASIC2.8□□□□□ -1.96
TSPAN3O60637 Y_RNA.40-201ENST00000362645 93 ntBASIC2.8□□□□□ -1.96
TSPAN3O60637 SNORA38-201ENST00000363946 132 ntBASIC2.8□□□□□ -1.96
TSPAN3O60637 SNORD116-11-201ENST00000383882 92 ntBASIC2.8□□□□□ -1.96
TSPAN3O60637 RNU1-57P-201ENST00000384491 166 ntBASIC2.8□□□□□ -1.96
TSPAN3O60637 RNU6-95P-201ENST00000384697 107 ntBASIC2.8□□□□□ -1.96
TSPAN3O60637 RNU6-220P-201ENST00000390919 107 ntBASIC2.8□□□□□ -1.96
TSPAN3O60637 RNU2-23P-201ENST00000410545 195 ntBASIC2.8□□□□□ -1.96
TSPAN3O60637 RNA5SP21-201ENST00000410917 96 ntBASIC2.8□□□□□ -1.96
TSPAN3O60637 AL030996.1-201ENST00000411430 235 ntBASIC2.8□□□□□ -1.96
TSPAN3O60637 MTND3P9-201ENST00000429526 346 ntBASIC2.8□□□□□ -1.96
TSPAN3O60637 RPS29P6-201ENST00000438196 145 ntBASIC2.8□□□□□ -1.96
TSPAN3O60637 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.8□□□□□ -1.96
TSPAN3O60637 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.8□□□□□ -1.96
TSPAN3O60637 AC130509.1-201ENST00000464158 433 ntBASIC2.8□□□□□ -1.96
TSPAN3O60637 RNU6-612P-201ENST00000516909 102 ntBASIC2.8□□□□□ -1.96
TSPAN3O60637 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
TSPAN3O60637 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.8□□□□□ -1.96
TSPAN3O60637 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.8□□□□□ -1.96
TSPAN3O60637 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
TSPAN3O60637 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.8□□□□□ -1.96
TSPAN3O60637 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.79□□□□□ -1.96
TSPAN3O60637 Y_RNA.279-201ENST00000364763 95 ntBASIC2.79□□□□□ -1.96
TSPAN3O60637 RNU6-933P-201ENST00000384424 107 ntBASIC2.79□□□□□ -1.96
TSPAN3O60637 HMGN2P35-201ENST00000412164 270 ntBASIC2.79□□□□□ -1.96
TSPAN3O60637 MTND3P8-201ENST00000412909 339 ntBASIC2.79□□□□□ -1.96
TSPAN3O60637 AC138393.2-201ENST00000414742 246 ntBASIC2.79□□□□□ -1.96
TSPAN3O60637 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.79□□□□□ -1.96
TSPAN3O60637 EIF4EP4-201ENST00000424916 578 ntBASIC2.79□□□□□ -1.96
TSPAN3O60637 SNAP23P1-201ENST00000433229 246 ntBASIC2.79□□□□□ -1.96
TSPAN3O60637 AC112220.1-201ENST00000434628 355 ntBASIC2.79□□□□□ -1.96
TSPAN3O60637 USP9YP8-201ENST00000441913 500 ntBASIC2.79□□□□□ -1.96
TSPAN3O60637 U8.21-201ENST00000459536 136 ntBASIC2.79□□□□□ -1.96
TSPAN3O60637 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.79□□□□□ -1.96
TSPAN3O60637 AC090525.1-201ENST00000479116 478 ntBASIC2.79□□□□□ -1.96
TSPAN3O60637 MTCO1P29-201ENST00000496868 288 ntBASIC2.79□□□□□ -1.96
TSPAN3O60637 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.79□□□□□ -1.96
TSPAN3O60637 RNU2-53P-201ENST00000516257 147 ntBASIC2.79□□□□□ -1.96
TSPAN3O60637 Y_RNA.682-201ENST00000516457 100 ntBASIC2.79□□□□□ -1.96
TSPAN3O60637 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.79□□□□□ -1.96
TSPAN3O60637 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.79□□□□□ -1.96
TSPAN3O60637 AC005668.1-201ENST00000571142 476 ntBASIC2.79□□□□□ -1.96
TSPAN3O60637 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.79□□□□□ -1.96
TSPAN3O60637 VN1R107P-201ENST00000601784 209 ntBASIC2.79□□□□□ -1.96
TSPAN3O60637 AL133216.2-202ENST00000634512 349 ntBASIC2.79□□□□□ -1.96
TSPAN3O60637 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.79□□□□□ -1.96
TSPAN3O60637 AC002543.1-201ENST00000299783 1954 ntBASIC2.78□□□□□ -1.96
TSPAN3O60637 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.78□□□□□ -1.96
TSPAN3O60637 MIR26A1-201ENST00000362205 77 ntBASIC2.78□□□□□ -1.96
TSPAN3O60637 RNU6-859P-201ENST00000362728 107 ntBASIC2.78□□□□□ -1.96
TSPAN3O60637 Y_RNA.135-201ENST00000363439 95 ntBASIC2.78□□□□□ -1.96
TSPAN3O60637 Y_RNA.151-201ENST00000363566 112 ntBASIC2.78□□□□□ -1.96
TSPAN3O60637 Y_RNA.301-201ENST00000364990 103 ntBASIC2.78□□□□□ -1.96
TSPAN3O60637 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
TSPAN3O60637 RNU6-43P-201ENST00000384302 107 ntBASIC2.78□□□□□ -1.96
TSPAN3O60637 RNU6-790P-201ENST00000384479 105 ntBASIC2.78□□□□□ -1.96
TSPAN3O60637 RNU6-1222P-201ENST00000384615 107 ntBASIC2.78□□□□□ -1.96
TSPAN3O60637 RNU6-1072P-201ENST00000384703 107 ntBASIC2.78□□□□□ -1.96
TSPAN3O60637 RNU6-443P-201ENST00000384780 107 ntBASIC2.78□□□□□ -1.96
TSPAN3O60637 AL139095.1-201ENST00000404326 391 ntBASIC2.78□□□□□ -1.96
TSPAN3O60637 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.78□□□□□ -1.96
TSPAN3O60637 AC008267.5-201ENST00000424928 265 ntBASIC2.78□□□□□ -1.96
TSPAN3O60637 MTCO3P46-201ENST00000425787 232 ntBASIC2.78□□□□□ -1.96
TSPAN3O60637 SUMO1P4-201ENST00000429430 302 ntBASIC2.78□□□□□ -1.96
TSPAN3O60637 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.78□□□□□ -1.96
TSPAN3O60637 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.78□□□□□ -1.96
TSPAN3O60637 AL031659.1-201ENST00000447075 539 ntBASIC2.78□□□□□ -1.96
TSPAN3O60637 MTND1P11-201ENST00000456661 876 ntBASIC2.78□□□□□ -1.96
TSPAN3O60637 AC090515.1-201ENST00000465295 476 ntBASIC2.78□□□□□ -1.96
TSPAN3O60637 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.78□□□□□ -1.96
TSPAN3O60637 RNU6-566P-201ENST00000516790 107 ntBASIC2.78□□□□□ -1.96
TSPAN3O60637 RNU7-30P-201ENST00000516835 62 ntBASIC2.78□□□□□ -1.96
TSPAN3O60637 SNORA20.3-201ENST00000516880 132 ntBASIC2.78□□□□□ -1.96
TSPAN3O60637 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.78□□□□□ -1.96
TSPAN3O60637 AC109329.2-201ENST00000519658 482 ntBASIC2.78□□□□□ -1.96
TSPAN3O60637 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.78□□□□□ -1.96
TSPAN3O60637 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.78□□□□□ -1.96
TSPAN3O60637 MIR4790-201ENST00000577799 79 ntBASIC2.78□□□□□ -1.96
TSPAN3O60637 AC005730.3-201ENST00000583067 366 ntBASIC2.78□□□□□ -1.96
TSPAN3O60637 MIR4658-201ENST00000584344 65 ntBASIC2.78□□□□□ -1.96
TSPAN3O60637 AC091135.1-201ENST00000585943 307 ntBASIC2.78□□□□□ -1.96
TSPAN3O60637 RPL30P11-203ENST00000598995 310 ntBASIC2.78□□□□□ -1.96
TSPAN3O60637 AP001836.1-201ENST00000604675 523 ntBASIC2.78□□□□□ -1.96
TSPAN3O60637 MIR6715A-201ENST00000615929 79 ntBASIC2.78□□□□□ -1.96
TSPAN3O60637 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
TSPAN3O60637 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms