Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AC026782.1-201ENST00000512952 449 ntBASIC2.49□□□□□ -2.01
PRKNO60260 RNU6-56P-201ENST00000516986 93 ntBASIC2.49□□□□□ -2.01
PRKNO60260 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.49□□□□□ -2.01
PRKNO60260 AC022634.1-201ENST00000520765 532 ntBASIC2.49□□□□□ -2.01
PRKNO60260 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.49□□□□□ -2.01
PRKNO60260 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.49□□□□□ -2.01
PRKNO60260 AC044792.1-201ENST00000593294 196 ntBASIC2.49□□□□□ -2.01
PRKNO60260 AC018462.2-201ENST00000605375 395 ntBASIC2.49□□□□□ -2.01
PRKNO60260 MIR3976-201ENST00000606807 139 ntBASIC2.49□□□□□ -2.01
PRKNO60260 PISRT1.1-201ENST00000616930 107 ntBASIC2.49□□□□□ -2.01
PRKNO60260 AL160413.1-201ENST00000622780 310 ntBASIC2.49□□□□□ -2.01
PRKNO60260 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PRKNO60260 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.49□□□□□ -2.01
PRKNO60260 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.49□□□□□ -2.01
PRKNO60260 AC093010.3-201ENST00000570269 15214 ntBASIC2.48□□□□□ -2.01
PRKNO60260 RNU6-105P-201ENST00000363909 104 ntBASIC2.48□□□□□ -2.01
PRKNO60260 SNORA75.4-201ENST00000391278 119 ntBASIC2.48□□□□□ -2.01
PRKNO60260 AL512633.1-201ENST00000399931 655 ntBASIC2.48□□□□□ -2.01
PRKNO60260 MTCYBP4-201ENST00000401524 249 ntBASIC2.48□□□□□ -2.01
PRKNO60260 Y_RNA.594-201ENST00000410373 140 ntBASIC2.48□□□□□ -2.01
PRKNO60260 RNU6-1050P-201ENST00000410388 107 ntBASIC2.48□□□□□ -2.01
PRKNO60260 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.48□□□□□ -2.01
PRKNO60260 AC063976.3-201ENST00000426849 329 ntBASIC2.48□□□□□ -2.01
PRKNO60260 FTH1P25-201ENST00000447665 469 ntBASIC2.48□□□□□ -2.01
PRKNO60260 RPL7P42-201ENST00000481005 679 ntBASIC2.48□□□□□ -2.01
PRKNO60260 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.48□□□□□ -2.01
PRKNO60260 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.48□□□□□ -2.01
PRKNO60260 PTP4A1P4-201ENST00000512479 322 ntBASIC2.48□□□□□ -2.01
PRKNO60260 Y_RNA.670-201ENST00000516255 105 ntBASIC2.48□□□□□ -2.01
PRKNO60260 RNU6-1153P-201ENST00000516760 105 ntBASIC2.48□□□□□ -2.01
PRKNO60260 Y_RNA.708-201ENST00000516950 96 ntBASIC2.48□□□□□ -2.01
PRKNO60260 ACA59.2-201ENST00000517061 156 ntBASIC2.48□□□□□ -2.01
PRKNO60260 AC010186.2-204ENST00000537668 439 ntBASIC2.48□□□□□ -2.01
PRKNO60260 MIR3605-201ENST00000583214 100 ntBASIC2.48□□□□□ -2.01
PRKNO60260 MIR5690-201ENST00000583739 73 ntBASIC2.48□□□□□ -2.01
PRKNO60260 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.48□□□□□ -2.01
PRKNO60260 AP000654.2-201ENST00000605633 586 ntBASIC2.48□□□□□ -2.01
PRKNO60260 AC009229.3-201ENST00000608056 282 ntBASIC2.48□□□□□ -2.01
PRKNO60260 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.48□□□□□ -2.01
PRKNO60260 AL133215.3-201ENST00000609801 448 ntBASIC2.48□□□□□ -2.01
PRKNO60260 AC007742.2-201ENST00000618226 398 ntBASIC2.48□□□□□ -2.01
PRKNO60260 AL669831.3-213ENST00000636676 183 ntBASIC2.48□□□□□ -2.01
PRKNO60260 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
PRKNO60260 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.48□□□□□ -2.01
PRKNO60260 AC004944.1-201ENST00000517807 3059 ntBASIC2.47□□□□□ -2.01
PRKNO60260 RNU6-859P-201ENST00000362728 107 ntBASIC2.47□□□□□ -2.01
PRKNO60260 Y_RNA.394-201ENST00000383942 103 ntBASIC2.47□□□□□ -2.01
PRKNO60260 Y_RNA.431-201ENST00000384086 102 ntBASIC2.47□□□□□ -2.01
PRKNO60260 MIR521-1-201ENST00000384902 87 ntBASIC2.47□□□□□ -2.01
PRKNO60260 MIR767-201ENST00000390228 109 ntBASIC2.47□□□□□ -2.01
PRKNO60260 AL590004.2-201ENST00000404787 371 ntBASIC2.47□□□□□ -2.01
PRKNO60260 AL513475.1-201ENST00000406602 315 ntBASIC2.47□□□□□ -2.01
PRKNO60260 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.47□□□□□ -2.01
PRKNO60260 AF228730.4-201ENST00000421457 183 ntBASIC2.47□□□□□ -2.01
PRKNO60260 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.47□□□□□ -2.01
PRKNO60260 AL591043.1-201ENST00000432461 424 ntBASIC2.47□□□□□ -2.01
PRKNO60260 Y_RNA.653-201ENST00000459091 95 ntBASIC2.47□□□□□ -2.01
PRKNO60260 U8.21-201ENST00000459536 136 ntBASIC2.47□□□□□ -2.01
PRKNO60260 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.47□□□□□ -2.01
PRKNO60260 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.47□□□□□ -2.01
PRKNO60260 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.47□□□□□ -2.01
PRKNO60260 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.47□□□□□ -2.01
PRKNO60260 MIR4635-201ENST00000583759 79 ntBASIC2.47□□□□□ -2.01
PRKNO60260 RPL23AP78-201ENST00000599928 470 ntBASIC2.47□□□□□ -2.01
PRKNO60260 RPL12P50-201ENST00000603116 116 ntBASIC2.47□□□□□ -2.01
PRKNO60260 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.47□□□□□ -2.01
PRKNO60260 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
PRKNO60260 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.46□□□□□ -2.01
PRKNO60260 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.46□□□□□ -2.02
PRKNO60260 Y_RNA.2-201ENST00000362330 96 ntBASIC2.46□□□□□ -2.02
PRKNO60260 SNORD56.1-201ENST00000362913 68 ntBASIC2.46□□□□□ -2.02
PRKNO60260 XGY1-201ENST00000381172 446 ntBASIC2.46□□□□□ -2.02
PRKNO60260 Y_RNA.404-201ENST00000383978 102 ntBASIC2.46□□□□□ -2.02
PRKNO60260 RNU6-310P-201ENST00000384655 107 ntBASIC2.46□□□□□ -2.02
PRKNO60260 Y_RNA.579-201ENST00000390939 94 ntBASIC2.46□□□□□ -2.02
PRKNO60260 RNA5SP210-201ENST00000391034 120 ntBASIC2.46□□□□□ -2.02
PRKNO60260 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
PRKNO60260 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
PRKNO60260 Y_RNA.646-201ENST00000410980 101 ntBASIC2.46□□□□□ -2.02
PRKNO60260 AL365496.1-201ENST00000426885 215 ntBASIC2.46□□□□□ -2.02
PRKNO60260 MTND3P9-201ENST00000429526 346 ntBASIC2.46□□□□□ -2.02
PRKNO60260 AL133396.1-201ENST00000432048 687 ntBASIC2.46□□□□□ -2.02
PRKNO60260 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.46□□□□□ -2.02
PRKNO60260 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
PRKNO60260 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.46□□□□□ -2.02
PRKNO60260 AC012308.1-201ENST00000451232 178 ntBASIC2.46□□□□□ -2.02
PRKNO60260 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.46□□□□□ -2.02
PRKNO60260 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.46□□□□□ -2.02
PRKNO60260 MTCO3P10-201ENST00000455912 772 ntBASIC2.46□□□□□ -2.02
PRKNO60260 SNORD5.1-201ENST00000458800 75 ntBASIC2.46□□□□□ -2.02
PRKNO60260 MED28P2-201ENST00000475771 317 ntBASIC2.46□□□□□ -2.02
PRKNO60260 SRIP1-201ENST00000489235 288 ntBASIC2.46□□□□□ -2.02
PRKNO60260 SNORA9.3-201ENST00000516383 129 ntBASIC2.46□□□□□ -2.02
PRKNO60260 Y_RNA.701-201ENST00000516812 110 ntBASIC2.46□□□□□ -2.02
PRKNO60260 RNU6-612P-201ENST00000516909 102 ntBASIC2.46□□□□□ -2.02
PRKNO60260 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.46□□□□□ -2.02
PRKNO60260 AC009163.5-201ENST00000575421 637 ntBASIC2.46□□□□□ -2.02
PRKNO60260 MIR3162-201ENST00000581818 82 ntBASIC2.46□□□□□ -2.02
PRKNO60260 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.46□□□□□ -2.02
PRKNO60260 AC011494.1-201ENST00000596454 237 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 175.6 ms