Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 AC097372.5-201ENST00000623665 376 ntBASIC3.21□□□□□ -1.9
PEX1O43933 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
PEX1O43933 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.21□□□□□ -1.9
PEX1O43933 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PEX1O43933 AP000560.1-201ENST00000624150 1937 ntBASIC3.21□□□□□ -1.9
PEX1O43933 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
PEX1O43933 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PEX1O43933 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
PEX1O43933 AC073346.2-201ENST00000624724 2058 ntBASIC3.2□□□□□ -1.9
PEX1O43933 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
PEX1O43933 Y_RNA.64-201ENST00000362845 102 ntBASIC3.2□□□□□ -1.9
PEX1O43933 RNU6-227P-201ENST00000362865 103 ntBASIC3.2□□□□□ -1.9
PEX1O43933 Y_RNA.123-201ENST00000363338 102 ntBASIC3.2□□□□□ -1.9
PEX1O43933 Y_RNA.152-201ENST00000363578 100 ntBASIC3.2□□□□□ -1.9
PEX1O43933 RNU6-379P-201ENST00000363813 104 ntBASIC3.2□□□□□ -1.9
PEX1O43933 RNA5SP267-201ENST00000364893 126 ntBASIC3.2□□□□□ -1.9
PEX1O43933 RNU6-898P-201ENST00000365627 104 ntBASIC3.2□□□□□ -1.9
PEX1O43933 SNORA51.11-201ENST00000384442 131 ntBASIC3.2□□□□□ -1.9
PEX1O43933 RNU6-658P-201ENST00000384606 106 ntBASIC3.2□□□□□ -1.9
PEX1O43933 Y_RNA.556-201ENST00000384677 113 ntBASIC3.2□□□□□ -1.9
PEX1O43933 MT-TW-201ENST00000387382 68 ntBASIC3.2□□□□□ -1.9
PEX1O43933 Y_RNA.592-201ENST00000410274 109 ntBASIC3.2□□□□□ -1.9
PEX1O43933 RNA5SP129-201ENST00000410276 118 ntBASIC3.2□□□□□ -1.9
PEX1O43933 RN7SKP58-201ENST00000411010 305 ntBASIC3.2□□□□□ -1.9
PEX1O43933 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.2□□□□□ -1.9
PEX1O43933 RPL30P10-201ENST00000488148 337 ntBASIC3.2□□□□□ -1.9
PEX1O43933 RNU6-397P-201ENST00000516226 104 ntBASIC3.2□□□□□ -1.9
PEX1O43933 AC109329.1-201ENST00000518744 317 ntBASIC3.2□□□□□ -1.9
PEX1O43933 AC144568.1-201ENST00000520139 137 ntBASIC3.2□□□□□ -1.9
PEX1O43933 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.2□□□□□ -1.9
PEX1O43933 MIR4782-201ENST00000577987 79 ntBASIC3.2□□□□□ -1.9
PEX1O43933 AC125232.2-201ENST00000592457 143 ntBASIC3.2□□□□□ -1.9
PEX1O43933 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.2□□□□□ -1.9
PEX1O43933 AL161756.2-201ENST00000604597 246 ntBASIC3.2□□□□□ -1.9
PEX1O43933 AC008962.1-201ENST00000605729 304 ntBASIC3.2□□□□□ -1.9
PEX1O43933 AC062037.2-201ENST00000610137 73 ntBASIC3.2□□□□□ -1.9
PEX1O43933 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
PEX1O43933 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.2□□□□□ -1.9
PEX1O43933 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.2□□□□□ -1.9
PEX1O43933 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PEX1O43933 AL353743.1-202ENST00000431724 1695 ntBASIC3.2□□□□□ -1.9
PEX1O43933 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PEX1O43933 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PEX1O43933 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PEX1O43933 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PEX1O43933 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
PEX1O43933 RNU6-942P-201ENST00000363002 107 ntBASIC3.19□□□□□ -1.9
PEX1O43933 RNU6-105P-201ENST00000363909 104 ntBASIC3.19□□□□□ -1.9
PEX1O43933 RNU1-33P-201ENST00000364249 162 ntBASIC3.19□□□□□ -1.9
PEX1O43933 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.19□□□□□ -1.9
PEX1O43933 DEFB109C-201ENST00000382575 264 ntBASIC3.19□□□□□ -1.9
PEX1O43933 DEFB109B-201ENST00000382656 264 ntBASIC3.19□□□□□ -1.9
PEX1O43933 Y_RNA.476-201ENST00000384347 108 ntBASIC3.19□□□□□ -1.9
PEX1O43933 Y_RNA.551-201ENST00000384661 102 ntBASIC3.19□□□□□ -1.9
PEX1O43933 SNORA46-201ENST00000384762 135 ntBASIC3.19□□□□□ -1.9
PEX1O43933 MIR23A-201ENST00000385245 73 ntBASIC3.19□□□□□ -1.9
PEX1O43933 SNORA69.1-201ENST00000390904 137 ntBASIC3.19□□□□□ -1.9
PEX1O43933 SNORD17-201ENST00000390930 237 ntBASIC3.19□□□□□ -1.9
PEX1O43933 RNU6-700P-201ENST00000391043 107 ntBASIC3.19□□□□□ -1.9
PEX1O43933 U3.37-201ENST00000408528 213 ntBASIC3.19□□□□□ -1.9
PEX1O43933 AC007098.1-201ENST00000420122 367 ntBASIC3.19□□□□□ -1.9
PEX1O43933 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.19□□□□□ -1.9
PEX1O43933 RPL23AP83-201ENST00000434984 473 ntBASIC3.19□□□□□ -1.9
PEX1O43933 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.19□□□□□ -1.9
PEX1O43933 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.19□□□□□ -1.9
PEX1O43933 AC104564.1-201ENST00000493028 407 ntBASIC3.19□□□□□ -1.9
PEX1O43933 SNORA25.11-201ENST00000515935 105 ntBASIC3.19□□□□□ -1.9
PEX1O43933 RNU1-61P-201ENST00000516107 151 ntBASIC3.19□□□□□ -1.9
PEX1O43933 Y_RNA.680-201ENST00000516441 93 ntBASIC3.19□□□□□ -1.9
PEX1O43933 SNORA43.2-201ENST00000516652 128 ntBASIC3.19□□□□□ -1.9
PEX1O43933 RNU6-1282P-201ENST00000516735 96 ntBASIC3.19□□□□□ -1.9
PEX1O43933 SNORA31.18-201ENST00000517043 134 ntBASIC3.19□□□□□ -1.9
PEX1O43933 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.19□□□□□ -1.9
PEX1O43933 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PEX1O43933 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.19□□□□□ -1.9
PEX1O43933 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.19□□□□□ -1.9
PEX1O43933 AL159153.1-201ENST00000619688 317 ntBASIC3.19□□□□□ -1.9
PEX1O43933 AC027309.3-201ENST00000623419 351 ntBASIC3.19□□□□□ -1.9
PEX1O43933 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
PEX1O43933 AC233263.6-201ENST00000631132 1963 ntBASIC3.19□□□□□ -1.9
PEX1O43933 AL355596.1-201ENST00000565399 3996 ntBASIC3.19□□□□□ -1.9
PEX1O43933 AL356274.2-201ENST00000624379 3752 ntBASIC3.18□□□□□ -1.9
PEX1O43933 Y_RNA.105-201ENST00000363182 111 ntBASIC3.18□□□□□ -1.9
PEX1O43933 Y_RNA.276-201ENST00000364732 109 ntBASIC3.18□□□□□ -1.9
PEX1O43933 Y_RNA.483-201ENST00000384380 101 ntBASIC3.18□□□□□ -1.9
PEX1O43933 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PEX1O43933 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.18□□□□□ -1.9
PEX1O43933 RNU6-130P-201ENST00000411112 103 ntBASIC3.18□□□□□ -1.9
PEX1O43933 BMS1P22-201ENST00000414726 313 ntBASIC3.18□□□□□ -1.9
PEX1O43933 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PEX1O43933 FCF1P4-201ENST00000448326 183 ntBASIC3.18□□□□□ -1.9
PEX1O43933 UQCRHP3-201ENST00000451503 251 ntBASIC3.18□□□□□ -1.9
PEX1O43933 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.18□□□□□ -1.9
PEX1O43933 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.18□□□□□ -1.9
PEX1O43933 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.18□□□□□ -1.9
PEX1O43933 RN7SL601P-201ENST00000471221 293 ntBASIC3.18□□□□□ -1.9
PEX1O43933 RNU6-408P-201ENST00000515910 100 ntBASIC3.18□□□□□ -1.9
PEX1O43933 RNU6-897P-201ENST00000517135 105 ntBASIC3.18□□□□□ -1.9
PEX1O43933 SNORA70.24-201ENST00000517233 118 ntBASIC3.18□□□□□ -1.9
PEX1O43933 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms