Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 Y_RNA.105-201ENST00000363182 111 ntBASIC3.55□□□□□ -1.84
FOXN1O15353 RNU6-338P-201ENST00000383888 105 ntBASIC3.55□□□□□ -1.84
FOXN1O15353 Y_RNA.462-201ENST00000384268 102 ntBASIC3.55□□□□□ -1.84
FOXN1O15353 Y_RNA.785-201ENST00000384290 109 ntBASIC3.55□□□□□ -1.84
FOXN1O15353 Y_RNA.480-201ENST00000384364 102 ntBASIC3.55□□□□□ -1.84
FOXN1O15353 RNU6-790P-201ENST00000384479 105 ntBASIC3.55□□□□□ -1.84
FOXN1O15353 MIR135A2-201ENST00000384854 100 ntBASIC3.55□□□□□ -1.84
FOXN1O15353 AL030996.1-201ENST00000411430 235 ntBASIC3.55□□□□□ -1.84
FOXN1O15353 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.55□□□□□ -1.84
FOXN1O15353 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.55□□□□□ -1.84
FOXN1O15353 RPS12P18-201ENST00000442381 270 ntBASIC3.55□□□□□ -1.84
FOXN1O15353 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.55□□□□□ -1.84
FOXN1O15353 LINC01399-202ENST00000458450 244 ntBASIC3.55□□□□□ -1.84
FOXN1O15353 RPS27P29-201ENST00000463110 252 ntBASIC3.55□□□□□ -1.84
FOXN1O15353 TRBVB-201ENST00000477100 408 ntBASIC3.55□□□□□ -1.84
FOXN1O15353 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.55□□□□□ -1.84
FOXN1O15353 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.55□□□□□ -1.84
FOXN1O15353 IGKV3-31-201ENST00000523109 329 ntBASIC3.55□□□□□ -1.84
FOXN1O15353 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.55□□□□□ -1.84
FOXN1O15353 MIR4273-201ENST00000582824 84 ntBASIC3.55□□□□□ -1.84
FOXN1O15353 VN1R91P-201ENST00000594377 169 ntBASIC3.55□□□□□ -1.84
FOXN1O15353 MIR1244-1-201ENST00000612829 85 ntBASIC3.55□□□□□ -1.84
FOXN1O15353 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
FOXN1O15353 AL159153.1-201ENST00000619688 317 ntBASIC3.55□□□□□ -1.84
FOXN1O15353 AC130454.1-201ENST00000622948 401 ntBASIC3.55□□□□□ -1.84
FOXN1O15353 MIR1244-3-201ENST00000635744 85 ntBASIC3.55□□□□□ -1.84
FOXN1O15353 MIR1244-2-201ENST00000636449 85 ntBASIC3.55□□□□□ -1.84
FOXN1O15353 MIR1244-4-202ENST00000636813 85 ntBASIC3.55□□□□□ -1.84
FOXN1O15353 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
FOXN1O15353 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
FOXN1O15353 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.54□□□□□ -1.84
FOXN1O15353 AP006437.1-201ENST00000641440 3685 ntBASIC3.54□□□□□ -1.84
FOXN1O15353 Y_RNA.20-201ENST00000362479 113 ntBASIC3.54□□□□□ -1.84
FOXN1O15353 RNU6-774P-201ENST00000363238 107 ntBASIC3.54□□□□□ -1.84
FOXN1O15353 Y_RNA.150-201ENST00000363562 102 ntBASIC3.54□□□□□ -1.84
FOXN1O15353 SNORD27-201ENST00000363981 72 ntBASIC3.54□□□□□ -1.84
FOXN1O15353 Y_RNA.539-201ENST00000384635 107 ntBASIC3.54□□□□□ -1.84
FOXN1O15353 MIR34A-201ENST00000385130 110 ntBASIC3.54□□□□□ -1.84
FOXN1O15353 MTCO2P33-201ENST00000402100 465 ntBASIC3.54□□□□□ -1.84
FOXN1O15353 RNU2-14P-201ENST00000411053 191 ntBASIC3.54□□□□□ -1.84
FOXN1O15353 AL137014.1-201ENST00000420490 1226 ntBASIC3.54□□□□□ -1.84
FOXN1O15353 USP9YP7-201ENST00000436723 430 ntBASIC3.54□□□□□ -1.84
FOXN1O15353 AL392103.1-201ENST00000447000 198 ntBASIC3.54□□□□□ -1.84
FOXN1O15353 USP9YP32-201ENST00000452432 430 ntBASIC3.54□□□□□ -1.84
FOXN1O15353 RPL7P5-201ENST00000471472 736 ntBASIC3.54□□□□□ -1.84
FOXN1O15353 RPL31P60-201ENST00000478450 367 ntBASIC3.54□□□□□ -1.84
FOXN1O15353 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.54□□□□□ -1.84
FOXN1O15353 MTND3P25-201ENST00000509243 135 ntBASIC3.54□□□□□ -1.84
FOXN1O15353 SCGB1D5P-201ENST00000515134 247 ntBASIC3.54□□□□□ -1.84
FOXN1O15353 RNU7-4P-201ENST00000516961 62 ntBASIC3.54□□□□□ -1.84
FOXN1O15353 SNORA81.3-201ENST00000517283 198 ntBASIC3.54□□□□□ -1.84
FOXN1O15353 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.54□□□□□ -1.84
FOXN1O15353 AC010900.2-201ENST00000604508 210 ntBASIC3.54□□□□□ -1.84
FOXN1O15353 MIR15A-201ENST00000607334 83 ntBASIC3.54□□□□□ -1.84
FOXN1O15353 AL591516.1-201ENST00000611326 274 ntBASIC3.54□□□□□ -1.84
FOXN1O15353 AC092628.2-201ENST00000622492 339 ntBASIC3.54□□□□□ -1.84
FOXN1O15353 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.54□□□□□ -1.84
FOXN1O15353 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
FOXN1O15353 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
FOXN1O15353 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
FOXN1O15353 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
FOXN1O15353 AC093831.2-201ENST00000624393 3427 ntBASIC3.53□□□□□ -1.84
FOXN1O15353 AC009487.2-201ENST00000420969 6821 ntBASIC3.53□□□□□ -1.84
FOXN1O15353 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
FOXN1O15353 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
FOXN1O15353 RNU6-212P-201ENST00000362642 104 ntBASIC3.53□□□□□ -1.84
FOXN1O15353 Y_RNA.180-201ENST00000363867 113 ntBASIC3.53□□□□□ -1.84
FOXN1O15353 RNU4-50P-201ENST00000364361 141 ntBASIC3.53□□□□□ -1.84
FOXN1O15353 Y_RNA.338-201ENST00000365320 114 ntBASIC3.53□□□□□ -1.84
FOXN1O15353 Y_RNA.416-201ENST00000384014 113 ntBASIC3.53□□□□□ -1.84
FOXN1O15353 SNORD67-201ENST00000390833 111 ntBASIC3.53□□□□□ -1.84
FOXN1O15353 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.53□□□□□ -1.84
FOXN1O15353 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.53□□□□□ -1.84
FOXN1O15353 RPL21P38-201ENST00000418090 167 ntBASIC3.53□□□□□ -1.84
FOXN1O15353 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.53□□□□□ -1.84
FOXN1O15353 RPL37P6-201ENST00000460682 294 ntBASIC3.53□□□□□ -1.84
FOXN1O15353 RN7SL75P-201ENST00000461926 281 ntBASIC3.53□□□□□ -1.84
FOXN1O15353 AC098869.1-201ENST00000481627 292 ntBASIC3.53□□□□□ -1.84
FOXN1O15353 AC078817.1-201ENST00000492623 435 ntBASIC3.53□□□□□ -1.84
FOXN1O15353 Y_RNA.687-201ENST00000516558 91 ntBASIC3.53□□□□□ -1.84
FOXN1O15353 AC069113.1-201ENST00000517763 267 ntBASIC3.53□□□□□ -1.84
FOXN1O15353 AC245166.1-201ENST00000521012 253 ntBASIC3.53□□□□□ -1.84
FOXN1O15353 AC046143.2-201ENST00000609789 160 ntBASIC3.53□□□□□ -1.84
FOXN1O15353 FTX_2.1-201ENST00000618816 94 ntBASIC3.53□□□□□ -1.84
FOXN1O15353 MIR6130-201ENST00000619419 109 ntBASIC3.53□□□□□ -1.84
FOXN1O15353 AL031601.2-202ENST00000622650 282 ntBASIC3.53□□□□□ -1.84
FOXN1O15353 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.53□□□□□ -1.84
FOXN1O15353 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
FOXN1O15353 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.52□□□□□ -1.85
FOXN1O15353 Y_RNA.471-201ENST00000384312 102 ntBASIC3.52□□□□□ -1.85
FOXN1O15353 Y_RNA.526-201ENST00000384572 110 ntBASIC3.52□□□□□ -1.85
FOXN1O15353 MIR578-201ENST00000384828 96 ntBASIC3.52□□□□□ -1.85
FOXN1O15353 MIR625-201ENST00000385047 85 ntBASIC3.52□□□□□ -1.85
FOXN1O15353 RPL21P3-201ENST00000395517 478 ntBASIC3.52□□□□□ -1.85
FOXN1O15353 U3.42-201ENST00000408746 214 ntBASIC3.52□□□□□ -1.85
FOXN1O15353 RNU6-121P-201ENST00000410525 99 ntBASIC3.52□□□□□ -1.85
FOXN1O15353 RNU4-78P-201ENST00000410940 126 ntBASIC3.52□□□□□ -1.85
FOXN1O15353 RNU6-325P-201ENST00000411132 105 ntBASIC3.52□□□□□ -1.85
FOXN1O15353 RPL32P35-201ENST00000415214 394 ntBASIC3.52□□□□□ -1.85
FOXN1O15353 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms