Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC245884.12-201ENST00000615364 59 ntBASIC2.42□□□□□ -2.02
O00370 Z82209.1-201ENST00000422141 2135 ntBASIC2.42□□□□□ -2.02
O00370 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
O00370 RNU6-942P-201ENST00000363002 107 ntBASIC2.41□□□□□ -2.02
O00370 RNU6-486P-201ENST00000363116 107 ntBASIC2.41□□□□□ -2.02
O00370 SNORA3A-201ENST00000364113 130 ntBASIC2.41□□□□□ -2.02
O00370 SNORA32.2-201ENST00000384049 122 ntBASIC2.41□□□□□ -2.02
O00370 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.41□□□□□ -2.02
O00370 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.41□□□□□ -2.02
O00370 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.41□□□□□ -2.02
O00370 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.41□□□□□ -2.02
O00370 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.41□□□□□ -2.02
O00370 TRBV12-1-201ENST00000479785 344 ntBASIC2.41□□□□□ -2.02
O00370 RPL36AP48-201ENST00000485521 314 ntBASIC2.41□□□□□ -2.02
O00370 MTCYBP18-201ENST00000501056 747 ntBASIC2.41□□□□□ -2.02
O00370 Y_RNA.665-201ENST00000516177 98 ntBASIC2.41□□□□□ -2.02
O00370 RNA5SP82-201ENST00000516707 92 ntBASIC2.41□□□□□ -2.02
O00370 MTND1P5-201ENST00000517906 940 ntBASIC2.41□□□□□ -2.02
O00370 AC104576.1-201ENST00000524225 88 ntBASIC2.41□□□□□ -2.02
O00370 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.41□□□□□ -2.02
O00370 AC023050.3-201ENST00000541142 333 ntBASIC2.41□□□□□ -2.02
O00370 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.41□□□□□ -2.02
O00370 CTHRC1P1-201ENST00000605383 469 ntBASIC2.41□□□□□ -2.02
O00370 AC104458.1-201ENST00000608243 463 ntBASIC2.41□□□□□ -2.02
O00370 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.41□□□□□ -2.02
O00370 Z69720.2-201ENST00000624755 279 ntBASIC2.41□□□□□ -2.02
O00370 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.41□□□□□ -2.02
O00370 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
O00370 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
O00370 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
O00370 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
O00370 RNU6-428P-201ENST00000362942 107 ntBASIC2.4□□□□□ -2.03
O00370 RNU1-91P-201ENST00000364746 163 ntBASIC2.4□□□□□ -2.03
O00370 RNU6-827P-201ENST00000365553 106 ntBASIC2.4□□□□□ -2.03
O00370 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.4□□□□□ -2.03
O00370 MTND1P23-201ENST00000416931 372 ntBASIC2.4□□□□□ -2.03
O00370 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.4□□□□□ -2.03
O00370 ARL5AP1-201ENST00000418991 388 ntBASIC2.4□□□□□ -2.03
O00370 SNRPEP10-201ENST00000420249 274 ntBASIC2.4□□□□□ -2.03
O00370 WARS2P1-201ENST00000429678 537 ntBASIC2.4□□□□□ -2.03
O00370 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.4□□□□□ -2.03
O00370 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.4□□□□□ -2.03
O00370 AC080013.2-201ENST00000460866 323 ntBASIC2.4□□□□□ -2.03
O00370 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.4□□□□□ -2.03
O00370 AC069439.1-201ENST00000494739 167 ntBASIC2.4□□□□□ -2.03
O00370 AC008628.2-201ENST00000502605 298 ntBASIC2.4□□□□□ -2.03
O00370 AC091885.1-201ENST00000506658 268 ntBASIC2.4□□□□□ -2.03
O00370 AK3P2-201ENST00000507976 429 ntBASIC2.4□□□□□ -2.03
O00370 SMURF2P1-201ENST00000514992 481 ntBASIC2.4□□□□□ -2.03
O00370 RNU6-377P-201ENST00000515965 102 ntBASIC2.4□□□□□ -2.03
O00370 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.4□□□□□ -2.03
O00370 MIR3941-201ENST00000582572 103 ntBASIC2.4□□□□□ -2.03
O00370 AP003465.2-201ENST00000602571 373 ntBASIC2.4□□□□□ -2.03
O00370 AL121917.1-203ENST00000605534 577 ntBASIC2.4□□□□□ -2.03
O00370 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
O00370 AC103705.1-201ENST00000619013 241 ntBASIC2.4□□□□□ -2.03
O00370 AC090617.10-201ENST00000624308 134 ntBASIC2.4□□□□□ -2.03
O00370 MTND5P6-201ENST00000422338 1798 ntBASIC2.4□□□□□ -2.03
O00370 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.4□□□□□ -2.03
O00370 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
O00370 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.39□□□□□ -2.03
O00370 RNU6-522P-201ENST00000364497 107 ntBASIC2.39□□□□□ -2.03
O00370 Y_RNA.248-201ENST00000364501 109 ntBASIC2.39□□□□□ -2.03
O00370 RNA5SP37-201ENST00000365420 130 ntBASIC2.39□□□□□ -2.03
O00370 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.39□□□□□ -2.03
O00370 SNORD56-201ENST00000413522 71 ntBASIC2.39□□□□□ -2.03
O00370 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.39□□□□□ -2.03
O00370 AL591043.1-201ENST00000432461 424 ntBASIC2.39□□□□□ -2.03
O00370 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.39□□□□□ -2.03
O00370 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.39□□□□□ -2.03
O00370 HMGN2P26-201ENST00000463169 339 ntBASIC2.39□□□□□ -2.03
O00370 RPL22P13-201ENST00000493291 347 ntBASIC2.39□□□□□ -2.03
O00370 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.39□□□□□ -2.03
O00370 RNU6-1332P-201ENST00000516666 104 ntBASIC2.39□□□□□ -2.03
O00370 CYCSP27-201ENST00000527643 293 ntBASIC2.39□□□□□ -2.03
O00370 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.39□□□□□ -2.03
O00370 AC103996.1-201ENST00000555468 102 ntBASIC2.39□□□□□ -2.03
O00370 MTCO3P23-201ENST00000561363 289 ntBASIC2.39□□□□□ -2.03
O00370 SNORA59B-202ENST00000578183 701 ntBASIC2.39□□□□□ -2.03
O00370 RPS15AP11-201ENST00000594193 385 ntBASIC2.39□□□□□ -2.03
O00370 BNIP3P25-201ENST00000596023 559 ntBASIC2.39□□□□□ -2.03
O00370 AC021646.1-201ENST00000605469 484 ntBASIC2.39□□□□□ -2.03
O00370 MIR6895-201ENST00000613497 78 ntBASIC2.39□□□□□ -2.03
O00370 AC093913.1-201ENST00000614178 329 ntBASIC2.39□□□□□ -2.03
O00370 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.39□□□□□ -2.03
O00370 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
O00370 MIR3529-201ENST00000637713 78 ntBASIC2.39□□□□□ -2.03
O00370 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
O00370 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
O00370 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
O00370 AL109809.4-201ENST00000603520 2185 ntBASIC2.39□□□□□ -2.03
O00370 RNU6-212P-201ENST00000362642 104 ntBASIC2.38□□□□□ -2.03
O00370 RNU6-82P-201ENST00000363970 107 ntBASIC2.38□□□□□ -2.03
O00370 EIF4E2P1-201ENST00000393781 255 ntBASIC2.38□□□□□ -2.03
O00370 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
O00370 U6atac.2-201ENST00000408644 118 ntBASIC2.38□□□□□ -2.03
O00370 MIR1261-201ENST00000408659 82 ntBASIC2.38□□□□□ -2.03
O00370 RN7SKP158-201ENST00000410453 326 ntBASIC2.38□□□□□ -2.03
O00370 RNU6-373P-201ENST00000411247 98 ntBASIC2.38□□□□□ -2.03
O00370 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms