Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 AC002545.1-201ENST00000592511 181 ntBASIC-0.69□□□□□ -2.52
LINC01549A6NIU2 AC034229.4-201ENST00000607861 441 ntBASIC-0.69□□□□□ -2.52
LINC01549A6NIU2 AC092634.7-201ENST00000621022 103 ntBASIC-0.69□□□□□ -2.52
LINC01549A6NIU2 SNORD114-19-201ENST00000363072 75 ntBASIC-0.7□□□□□ -2.52
LINC01549A6NIU2 Y_RNA.164-201ENST00000363709 102 ntBASIC-0.7□□□□□ -2.52
LINC01549A6NIU2 Y_RNA.393-201ENST00000383936 102 ntBASIC-0.7□□□□□ -2.52
LINC01549A6NIU2 MIR610-201ENST00000385139 96 ntBASIC-0.7□□□□□ -2.52
LINC01549A6NIU2 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.7□□□□□ -2.52
LINC01549A6NIU2 RNU6-747P-201ENST00000390928 104 ntBASIC-0.7□□□□□ -2.52
LINC01549A6NIU2 SNORA75.2-201ENST00000391138 150 ntBASIC-0.7□□□□□ -2.52
LINC01549A6NIU2 RNU6-241P-201ENST00000391148 104 ntBASIC-0.7□□□□□ -2.52
LINC01549A6NIU2 SNORA75.3-201ENST00000391231 150 ntBASIC-0.7□□□□□ -2.52
LINC01549A6NIU2 RNA5SP504-201ENST00000410676 117 ntBASIC-0.7□□□□□ -2.52
LINC01549A6NIU2 COX6CP10-201ENST00000416832 224 ntBASIC-0.7□□□□□ -2.52
LINC01549A6NIU2 ELOCP14-201ENST00000428070 331 ntBASIC-0.7□□□□□ -2.52
LINC01549A6NIU2 ELOCP7-201ENST00000439968 331 ntBASIC-0.7□□□□□ -2.52
LINC01549A6NIU2 AC112206.3-201ENST00000514578 389 ntBASIC-0.7□□□□□ -2.52
LINC01549A6NIU2 SNORA70.12-201ENST00000516084 153 ntBASIC-0.7□□□□□ -2.52
LINC01549A6NIU2 RNU6-703P-201ENST00000516946 107 ntBASIC-0.7□□□□□ -2.52
LINC01549A6NIU2 AC105185.1-201ENST00000518705 535 ntBASIC-0.7□□□□□ -2.52
LINC01549A6NIU2 HIGD1AP6-201ENST00000521833 279 ntBASIC-0.7□□□□□ -2.52
LINC01549A6NIU2 AC093012.1-202ENST00000549403 582 ntBASIC-0.7□□□□□ -2.52
LINC01549A6NIU2 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC-0.7□□□□□ -2.52
LINC01549A6NIU2 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC-0.7□□□□□ -2.52
LINC01549A6NIU2 AL158211.1-201ENST00000566763 763 ntBASIC-0.7□□□□□ -2.52
LINC01549A6NIU2 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC-0.7□□□□□ -2.52
LINC01549A6NIU2 AC117490.2-201ENST00000610042 594 ntBASIC-0.7□□□□□ -2.52
LINC01549A6NIU2 GHRLOS.1-201ENST00000610995 70 ntBASIC-0.7□□□□□ -2.52
LINC01549A6NIU2 MIR1248-201ENST00000629190 106 ntBASIC-0.7□□□□□ -2.52
LINC01549A6NIU2 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC-0.7□□□□□ -2.52
LINC01549A6NIU2 MIR4275-201ENST00000636486 87 ntBASIC-0.7□□□□□ -2.52
LINC01549A6NIU2 RNU6-658P-201ENST00000384606 106 ntBASIC-0.71□□□□□ -2.52
LINC01549A6NIU2 SSR1P1-201ENST00000407630 814 ntBASIC-0.71□□□□□ -2.52
LINC01549A6NIU2 AL358176.2-201ENST00000425769 204 ntBASIC-0.71□□□□□ -2.52
LINC01549A6NIU2 MTCYBP15-201ENST00000433123 1127 ntBASIC-0.71□□□□□ -2.52
LINC01549A6NIU2 RPL23AP50-201ENST00000434149 455 ntBASIC-0.71□□□□□ -2.52
LINC01549A6NIU2 RNU6-333P-201ENST00000459117 107 ntBASIC-0.71□□□□□ -2.52
LINC01549A6NIU2 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.71□□□□□ -2.52
LINC01549A6NIU2 SUMO2P18-201ENST00000518873 252 ntBASIC-0.71□□□□□ -2.52
LINC01549A6NIU2 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC-0.71□□□□□ -2.52
LINC01549A6NIU2 AC136475.10-201ENST00000620253 385 ntBASIC-0.71□□□□□ -2.52
LINC01549A6NIU2 AC106730.3-201ENST00000624568 641 ntBASIC-0.71□□□□□ -2.52
LINC01549A6NIU2 Y_RNA.116-201ENST00000363292 103 ntBASIC-0.72□□□□□ -2.52
LINC01549A6NIU2 RNU6-670P-201ENST00000364312 104 ntBASIC-0.72□□□□□ -2.52
LINC01549A6NIU2 RNU1-39P-201ENST00000383897 165 ntBASIC-0.72□□□□□ -2.52
LINC01549A6NIU2 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.72□□□□□ -2.52
LINC01549A6NIU2 AC096531.1-201ENST00000419107 107 ntBASIC-0.72□□□□□ -2.52
LINC01549A6NIU2 AC007435.1-201ENST00000421086 415 ntBASIC-0.72□□□□□ -2.52
LINC01549A6NIU2 FAM204CP-201ENST00000424489 642 ntBASIC-0.72□□□□□ -2.52
LINC01549A6NIU2 FO393419.3-201ENST00000428741 282 ntBASIC-0.72□□□□□ -2.52
LINC01549A6NIU2 ELOCP30-201ENST00000447108 299 ntBASIC-0.72□□□□□ -2.52
LINC01549A6NIU2 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC-0.72□□□□□ -2.52
LINC01549A6NIU2 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC-0.72□□□□□ -2.52
LINC01549A6NIU2 HMGB1P28-201ENST00000507778 552 ntBASIC-0.72□□□□□ -2.52
LINC01549A6NIU2 MRPS36P5-201ENST00000551909 298 ntBASIC-0.72□□□□□ -2.52
LINC01549A6NIU2 HIGD1AP17-201ENST00000554576 276 ntBASIC-0.72□□□□□ -2.52
LINC01549A6NIU2 MIR4709-201ENST00000577272 72 ntBASIC-0.72□□□□□ -2.52
LINC01549A6NIU2 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC-0.72□□□□□ -2.52
LINC01549A6NIU2 AC011712.1-201ENST00000588959 234 ntBASIC-0.72□□□□□ -2.52
LINC01549A6NIU2 AC067863.3-201ENST00000624172 122 ntBASIC-0.72□□□□□ -2.52
LINC01549A6NIU2 AC017104.5-201ENST00000637647 639 ntBASIC-0.72□□□□□ -2.52
LINC01549A6NIU2 AC245060.5-201ENST00000610778 3293 ntBASIC-0.72□□□□□ -2.53
LINC01549A6NIU2 SNORA1.1-201ENST00000364671 133 ntBASIC-0.73□□□□□ -2.53
LINC01549A6NIU2 MIR145-201ENST00000384967 88 ntBASIC-0.73□□□□□ -2.53
LINC01549A6NIU2 MIR518E-201ENST00000385252 88 ntBASIC-0.73□□□□□ -2.53
LINC01549A6NIU2 MIR1197-201ENST00000408818 88 ntBASIC-0.73□□□□□ -2.53
LINC01549A6NIU2 SNORD71-201ENST00000411292 86 ntBASIC-0.73□□□□□ -2.53
LINC01549A6NIU2 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC-0.73□□□□□ -2.53
LINC01549A6NIU2 MTCO2P34-201ENST00000421994 607 ntBASIC-0.73□□□□□ -2.53
LINC01549A6NIU2 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC-0.73□□□□□ -2.53
LINC01549A6NIU2 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.73□□□□□ -2.53
LINC01549A6NIU2 MED13P1-201ENST00000428342 171 ntBASIC-0.73□□□□□ -2.53
LINC01549A6NIU2 RNFT1P2-201ENST00000443064 757 ntBASIC-0.73□□□□□ -2.53
LINC01549A6NIU2 AC068135.1-201ENST00000446164 246 ntBASIC-0.73□□□□□ -2.53
LINC01549A6NIU2 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC-0.73□□□□□ -2.53
LINC01549A6NIU2 COX7A2P2-201ENST00000505291 250 ntBASIC-0.73□□□□□ -2.53
LINC01549A6NIU2 ZNF519P3-201ENST00000557158 1032 ntBASIC-0.73□□□□□ -2.53
LINC01549A6NIU2 AL136317.1-201ENST00000612653 226 ntBASIC-0.73□□□□□ -2.53
LINC01549A6NIU2 uc_338.6-201ENST00000613544 171 ntBASIC-0.73□□□□□ -2.53
LINC01549A6NIU2 AC013470.4-201ENST00000619978 986 ntBASIC-0.73□□□□□ -2.53
LINC01549A6NIU2 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC-0.73□□□□□ -2.53
LINC01549A6NIU2 AL159972.1-201ENST00000625150 448 ntBASIC-0.73□□□□□ -2.53
LINC01549A6NIU2 RNU6-529P-201ENST00000363383 104 ntBASIC-0.74□□□□□ -2.53
LINC01549A6NIU2 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC-0.74□□□□□ -2.53
LINC01549A6NIU2 RNU6-929P-201ENST00000384429 107 ntBASIC-0.74□□□□□ -2.53
LINC01549A6NIU2 RNY1P4-201ENST00000384595 115 ntBASIC-0.74□□□□□ -2.53
LINC01549A6NIU2 MIR186-201ENST00000384988 86 ntBASIC-0.74□□□□□ -2.53
LINC01549A6NIU2 ELOCP9-201ENST00000418624 239 ntBASIC-0.74□□□□□ -2.53
LINC01549A6NIU2 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC-0.74□□□□□ -2.53
LINC01549A6NIU2 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC-0.74□□□□□ -2.53
LINC01549A6NIU2 MTND1P28-201ENST00000435623 950 ntBASIC-0.74□□□□□ -2.53
LINC01549A6NIU2 AC069257.2-201ENST00000441819 155 ntBASIC-0.74□□□□□ -2.53
LINC01549A6NIU2 AC003071.1-201ENST00000451219 789 ntBASIC-0.74□□□□□ -2.53
LINC01549A6NIU2 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.74□□□□□ -2.53
LINC01549A6NIU2 AC021146.8-201ENST00000507455 733 ntBASIC-0.74□□□□□ -2.53
LINC01549A6NIU2 AC104136.1-201ENST00000512969 394 ntBASIC-0.74□□□□□ -2.53
LINC01549A6NIU2 AC027338.1-201ENST00000514840 825 ntBASIC-0.74□□□□□ -2.53
LINC01549A6NIU2 SNORA25.12-201ENST00000516202 82 ntBASIC-0.74□□□□□ -2.53
LINC01549A6NIU2 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.74□□□□□ -2.53
LINC01549A6NIU2 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC-0.74□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms