Protein–RNA interactions for Protein: A1L190

SYCE3, Synaptonemal complex central element protein 3, humanhuman

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE3A1L190 MIR1273D-201ENST00000577266 86 ntBASIC2.03□□□□□ -2.08
SYCE3A1L190 AC010928.2-201ENST00000588017 287 ntBASIC2.03□□□□□ -2.08
SYCE3A1L190 BNIP3P16-201ENST00000589779 534 ntBASIC2.03□□□□□ -2.08
SYCE3A1L190 AC068790.2-201ENST00000602601 557 ntBASIC2.03□□□□□ -2.08
SYCE3A1L190 AC005034.5-201ENST00000604219 466 ntBASIC2.03□□□□□ -2.08
SYCE3A1L190 AC123912.5-201ENST00000605470 343 ntBASIC2.03□□□□□ -2.08
SYCE3A1L190 AC087752.4-201ENST00000605911 462 ntBASIC2.03□□□□□ -2.08
SYCE3A1L190 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SYCE3A1L190 MIR1248-201ENST00000629190 106 ntBASIC2.03□□□□□ -2.08
SYCE3A1L190 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.03□□□□□ -2.08
SYCE3A1L190 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SYCE3A1L190 AP006437.1-201ENST00000641440 3685 ntBASIC2.02□□□□□ -2.09
SYCE3A1L190 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
SYCE3A1L190 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.02□□□□□ -2.09
SYCE3A1L190 RNA5SP465-201ENST00000391195 109 ntBASIC2.02□□□□□ -2.09
SYCE3A1L190 RNU2-29P-201ENST00000410423 189 ntBASIC2.02□□□□□ -2.09
SYCE3A1L190 USP9YP29-201ENST00000445112 563 ntBASIC2.02□□□□□ -2.09
SYCE3A1L190 AC245102.2-201ENST00000448956 180 ntBASIC2.02□□□□□ -2.09
SYCE3A1L190 AL356010.1-201ENST00000456364 102 ntBASIC2.02□□□□□ -2.09
SYCE3A1L190 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.02□□□□□ -2.09
SYCE3A1L190 SCARNA18-201ENST00000459004 134 ntBASIC2.02□□□□□ -2.09
SYCE3A1L190 ARL2BPP4-201ENST00000506854 471 ntBASIC2.02□□□□□ -2.09
SYCE3A1L190 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.02□□□□□ -2.09
SYCE3A1L190 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.02□□□□□ -2.09
SYCE3A1L190 AC105417.1-201ENST00000514691 285 ntBASIC2.02□□□□□ -2.09
SYCE3A1L190 RN7SKP219-201ENST00000516825 296 ntBASIC2.02□□□□□ -2.09
SYCE3A1L190 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.02□□□□□ -2.09
SYCE3A1L190 COPS8P3-201ENST00000526024 482 ntBASIC2.02□□□□□ -2.09
SYCE3A1L190 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.02□□□□□ -2.09
SYCE3A1L190 AL391840.1-201ENST00000571144 367 ntBASIC2.02□□□□□ -2.09
SYCE3A1L190 MIR4528-201ENST00000577763 90 ntBASIC2.02□□□□□ -2.09
SYCE3A1L190 MIR3618-201ENST00000580330 88 ntBASIC2.02□□□□□ -2.09
SYCE3A1L190 VN1R107P-201ENST00000601784 209 ntBASIC2.02□□□□□ -2.09
SYCE3A1L190 AC104073.3-201ENST00000610942 955 ntBASIC2.02□□□□□ -2.09
SYCE3A1L190 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.02□□□□□ -2.09
SYCE3A1L190 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
SYCE3A1L190 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SYCE3A1L190 RNU6-1120P-201ENST00000362988 108 ntBASIC2.01□□□□□ -2.09
SYCE3A1L190 SNORD115-3-201ENST00000363100 82 ntBASIC2.01□□□□□ -2.09
SYCE3A1L190 RNU6-336P-201ENST00000364891 107 ntBASIC2.01□□□□□ -2.09
SYCE3A1L190 SNORA8-201ENST00000384574 139 ntBASIC2.01□□□□□ -2.09
SYCE3A1L190 RNU2-9P-201ENST00000410194 145 ntBASIC2.01□□□□□ -2.09
SYCE3A1L190 OOSP1P1-201ENST00000423265 274 ntBASIC2.01□□□□□ -2.09
SYCE3A1L190 BX510359.4-201ENST00000423750 193 ntBASIC2.01□□□□□ -2.09
SYCE3A1L190 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.01□□□□□ -2.09
SYCE3A1L190 AL139415.2-201ENST00000431968 163 ntBASIC2.01□□□□□ -2.09
SYCE3A1L190 AL358934.1-201ENST00000432346 324 ntBASIC2.01□□□□□ -2.09
SYCE3A1L190 HMGN2P3-201ENST00000433603 273 ntBASIC2.01□□□□□ -2.09
SYCE3A1L190 HMGN2P5-201ENST00000436882 273 ntBASIC2.01□□□□□ -2.09
SYCE3A1L190 RN7SL429P-201ENST00000479090 223 ntBASIC2.01□□□□□ -2.09
SYCE3A1L190 RN7SL489P-201ENST00000486185 223 ntBASIC2.01□□□□□ -2.09
SYCE3A1L190 RN7SL327P-201ENST00000488659 223 ntBASIC2.01□□□□□ -2.09
SYCE3A1L190 AC022447.4-201ENST00000504053 364 ntBASIC2.01□□□□□ -2.09
SYCE3A1L190 AC008549.1-201ENST00000512900 643 ntBASIC2.01□□□□□ -2.09
SYCE3A1L190 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.01□□□□□ -2.09
SYCE3A1L190 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.01□□□□□ -2.09
SYCE3A1L190 AP001893.2-201ENST00000526949 202 ntBASIC2.01□□□□□ -2.09
SYCE3A1L190 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.01□□□□□ -2.09
SYCE3A1L190 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.01□□□□□ -2.09
SYCE3A1L190 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.01□□□□□ -2.09
SYCE3A1L190 AL078605.1-201ENST00000603529 500 ntBASIC2.01□□□□□ -2.09
SYCE3A1L190 AC073114.1-201ENST00000612027 490 ntBASIC2.01□□□□□ -2.09
SYCE3A1L190 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
SYCE3A1L190 RN7SL853P-201ENST00000617250 223 ntBASIC2.01□□□□□ -2.09
SYCE3A1L190 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.01□□□□□ -2.09
SYCE3A1L190 ZNF680P1-201ENST00000436625 1469 ntBASIC2.01□□□□□ -2.09
SYCE3A1L190 RNU4-15P-201ENST00000362613 141 ntBASIC2□□□□□ -2.09
SYCE3A1L190 RNU6-428P-201ENST00000362942 107 ntBASIC2□□□□□ -2.09
SYCE3A1L190 Y_RNA.159-201ENST00000363674 87 ntBASIC2□□□□□ -2.09
SYCE3A1L190 Y_RNA.399-201ENST00000383955 105 ntBASIC2□□□□□ -2.09
SYCE3A1L190 SNORD116-8-201ENST00000384365 95 ntBASIC2□□□□□ -2.09
SYCE3A1L190 RPS29P13-201ENST00000402041 169 ntBASIC2□□□□□ -2.09
SYCE3A1L190 GSTA9P-201ENST00000406231 611 ntBASIC2□□□□□ -2.09
SYCE3A1L190 SNORA3.2-201ENST00000408221 125 ntBASIC2□□□□□ -2.09
SYCE3A1L190 RNU6-1245P-201ENST00000411130 106 ntBASIC2□□□□□ -2.09
SYCE3A1L190 RNU6-293P-201ENST00000411259 106 ntBASIC2□□□□□ -2.09
SYCE3A1L190 MTATP6P18-201ENST00000417994 673 ntBASIC2□□□□□ -2.09
SYCE3A1L190 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2□□□□□ -2.09
SYCE3A1L190 MTND4P32-201ENST00000437189 1237 ntBASIC2□□□□□ -2.09
SYCE3A1L190 AL513124.1-201ENST00000450410 614 ntBASIC2□□□□□ -2.09
SYCE3A1L190 AC079140.5-201ENST00000507882 310 ntBASIC2□□□□□ -2.09
SYCE3A1L190 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2□□□□□ -2.09
SYCE3A1L190 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2□□□□□ -2.09
SYCE3A1L190 AC007834.2-201ENST00000536310 343 ntBASIC2□□□□□ -2.09
SYCE3A1L190 AGGF1P4-201ENST00000568249 801 ntBASIC2□□□□□ -2.09
SYCE3A1L190 AC243960.4-201ENST00000600532 288 ntBASIC2□□□□□ -2.09
SYCE3A1L190 AC091805.2-201ENST00000603848 235 ntBASIC2□□□□□ -2.09
SYCE3A1L190 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2□□□□□ -2.09
SYCE3A1L190 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SYCE3A1L190 RNU6-43P-201ENST00000384302 107 ntBASIC1.99□□□□□ -2.09
SYCE3A1L190 RNU6-692P-201ENST00000384496 107 ntBASIC1.99□□□□□ -2.09
SYCE3A1L190 RNU6-903P-201ENST00000391270 109 ntBASIC1.99□□□□□ -2.09
SYCE3A1L190 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.99□□□□□ -2.09
SYCE3A1L190 AL117339.3-201ENST00000418733 162 ntBASIC1.99□□□□□ -2.09
SYCE3A1L190 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.99□□□□□ -2.09
SYCE3A1L190 AC244636.1-201ENST00000421152 228 ntBASIC1.99□□□□□ -2.09
SYCE3A1L190 AC096638.1-201ENST00000444678 216 ntBASIC1.99□□□□□ -2.09
SYCE3A1L190 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.99□□□□□ -2.09
SYCE3A1L190 AC093259.1-201ENST00000509755 300 ntBASIC1.99□□□□□ -2.09
SYCE3A1L190 MTND3P5-201ENST00000512798 333 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms