Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 RNU5E-7P-201ENST00000365290 117 ntBASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 RNU6-25P-201ENST00000383873 107 ntBASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 RNU6-1-201ENST00000383898 107 ntBASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 RNU6-259P-201ENST00000383999 107 ntBASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 RNU6-48P-201ENST00000384161 107 ntBASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 RNU6-36P-201ENST00000384172 107 ntBASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 RNU6-4P-201ENST00000384205 107 ntBASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 RNU6-5P-201ENST00000384238 107 ntBASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 RNU6-3P-201ENST00000384314 107 ntBASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 RNU6-16P-201ENST00000384385 107 ntBASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 RNU6-15P-201ENST00000384534 107 ntBASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 RNU6-2-201ENST00000384627 107 ntBASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 RNU6-29P-201ENST00000384637 107 ntBASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 RNU6-9-201ENST00000384776 107 ntBASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 RNU6-33P-201ENST00000384793 107 ntBASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 MIR144-201ENST00000384886 86 ntBASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 MIR186-201ENST00000384988 86 ntBASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 RNU6-780P-201ENST00000391030 104 ntBASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 AL627390.1-201ENST00000396055 340 ntBASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 AL591034.2-201ENST00000402839 359 ntBASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 RAP1BP3-201ENST00000407180 549 ntBASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 OR9R1P-201ENST00000412200 877 ntBASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 AC074117.2-201ENST00000417130 397 ntBASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 AC016691.1-201ENST00000441321 413 ntBASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 AC087884.1-201ENST00000469738 328 ntBASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 AF213884.2-201ENST00000510417 903 ntBASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 AC010493.1-201ENST00000513479 292 ntBASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 AL137161.1-201ENST00000532231 390 ntBASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 AC022880.1-201ENST00000534017 973 ntBASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 AC024909.2-201ENST00000553035 286 ntBASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 AL133241.1-201ENST00000556832 487 ntBASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 AC073410.2-201ENST00000603240 332 ntBASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 RNU6-6P-201ENST00000606623 107 ntBASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 AP001330.5-201ENST00000607176 411 ntBASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 AL354950.2-201ENST00000617939 290 ntBASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 AC139792.3-201ENST00000623525 224 ntBASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 AC012640.5-201ENST00000623897 319 ntBASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.91□□□□□ -2.1
SMIM28A0A1B0GU29 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.9□□□□□ -2.1
SMIM28A0A1B0GU29 MTND4P1-201ENST00000457501 1466 ntBASIC1.9□□□□□ -2.11
SMIM28A0A1B0GU29 ZNF72P-201ENST00000425869 1908 ntBASIC1.9□□□□□ -2.11
SMIM28A0A1B0GU29 AC138393.1-203ENST00000327086 343 ntBASIC1.9□□□□□ -2.11
SMIM28A0A1B0GU29 Y_RNA.41-201ENST00000362646 102 ntBASIC1.9□□□□□ -2.11
SMIM28A0A1B0GU29 RNU6-529P-201ENST00000363383 104 ntBASIC1.9□□□□□ -2.11
SMIM28A0A1B0GU29 Y_RNA.194-201ENST00000363985 102 ntBASIC1.9□□□□□ -2.11
SMIM28A0A1B0GU29 RNU1-57P-201ENST00000384491 166 ntBASIC1.9□□□□□ -2.11
SMIM28A0A1B0GU29 CALM2P3-201ENST00000400429 449 ntBASIC1.9□□□□□ -2.11
SMIM28A0A1B0GU29 SNORD23.1-201ENST00000408212 104 ntBASIC1.9□□□□□ -2.11
SMIM28A0A1B0GU29 AC138623.1-201ENST00000418060 216 ntBASIC1.9□□□□□ -2.11
SMIM28A0A1B0GU29 AL358453.1-201ENST00000422522 250 ntBASIC1.9□□□□□ -2.11
SMIM28A0A1B0GU29 AL645568.3-201ENST00000433683 316 ntBASIC1.9□□□□□ -2.11
SMIM28A0A1B0GU29 AC007969.2-201ENST00000441891 191 ntBASIC1.9□□□□□ -2.11
SMIM28A0A1B0GU29 AC124916.1-201ENST00000444020 547 ntBASIC1.9□□□□□ -2.11
SMIM28A0A1B0GU29 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.9□□□□□ -2.11
SMIM28A0A1B0GU29 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.9□□□□□ -2.11
SMIM28A0A1B0GU29 SNRPFP3-201ENST00000457792 225 ntBASIC1.9□□□□□ -2.11
SMIM28A0A1B0GU29 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.9□□□□□ -2.11
SMIM28A0A1B0GU29 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.9□□□□□ -2.11
SMIM28A0A1B0GU29 RNU6-991P-201ENST00000516168 107 ntBASIC1.9□□□□□ -2.11
SMIM28A0A1B0GU29 SNORA25.15-201ENST00000516487 89 ntBASIC1.9□□□□□ -2.11
SMIM28A0A1B0GU29 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.9□□□□□ -2.11
SMIM28A0A1B0GU29 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.9□□□□□ -2.11
SMIM28A0A1B0GU29 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.9□□□□□ -2.11
SMIM28A0A1B0GU29 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.9□□□□□ -2.11
SMIM28A0A1B0GU29 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.9□□□□□ -2.11
SMIM28A0A1B0GU29 AL138976.2-201ENST00000563989 694 ntBASIC1.9□□□□□ -2.11
SMIM28A0A1B0GU29 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.9□□□□□ -2.11
SMIM28A0A1B0GU29 MIR5694-201ENST00000581190 76 ntBASIC1.9□□□□□ -2.11
SMIM28A0A1B0GU29 MIR4424-201ENST00000585257 86 ntBASIC1.9□□□□□ -2.11
SMIM28A0A1B0GU29 AC025165.5-201ENST00000602802 578 ntBASIC1.9□□□□□ -2.11
SMIM28A0A1B0GU29 AC012507.3-201ENST00000603556 477 ntBASIC1.9□□□□□ -2.11
SMIM28A0A1B0GU29 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
SMIM28A0A1B0GU29 AC097065.2-201ENST00000608159 533 ntBASIC1.9□□□□□ -2.11
SMIM28A0A1B0GU29 AC017083.3-201ENST00000609955 700 ntBASIC1.9□□□□□ -2.11
SMIM28A0A1B0GU29 AC104073.3-201ENST00000610942 955 ntBASIC1.9□□□□□ -2.11
SMIM28A0A1B0GU29 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
SMIM28A0A1B0GU29 OR5AK4P-201ENST00000635912 903 ntBASIC1.9□□□□□ -2.11
SMIM28A0A1B0GU29 MIR6863-201ENST00000636112 90 ntBASIC1.9□□□□□ -2.11
SMIM28A0A1B0GU29 U4.7-201ENST00000638126 106 ntBASIC1.9□□□□□ -2.11
SMIM28A0A1B0GU29 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SMIM28A0A1B0GU29 KPNA2P1-201ENST00000458289 1591 ntBASIC1.89□□□□□ -2.11
SMIM28A0A1B0GU29 SNORD114-19-201ENST00000363072 75 ntBASIC1.89□□□□□ -2.11
SMIM28A0A1B0GU29 RNU1-23P-201ENST00000363361 144 ntBASIC1.89□□□□□ -2.11
SMIM28A0A1B0GU29 RNU4-20P-201ENST00000365601 151 ntBASIC1.89□□□□□ -2.11
SMIM28A0A1B0GU29 Y_RNA.436-201ENST00000384097 102 ntBASIC1.89□□□□□ -2.11
SMIM28A0A1B0GU29 RNU6-434P-201ENST00000384376 107 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms