Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 VN1R80P-201ENST00000597126 338 ntBASIC0.76□□□□□ -2.29
TMEM56-RWDD3S4R434 AL590229.1-201ENST00000603497 542 ntBASIC0.76□□□□□ -2.29
TMEM56-RWDD3S4R434 MZT1P2-201ENST00000604387 248 ntBASIC0.76□□□□□ -2.29
TMEM56-RWDD3S4R434 AC072039.2-201ENST00000608883 439 ntBASIC0.76□□□□□ -2.29
TMEM56-RWDD3S4R434 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.76□□□□□ -2.29
TMEM56-RWDD3S4R434 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
TMEM56-RWDD3S4R434 MIR340-201ENST00000362125 95 ntBASIC0.75□□□□□ -2.29
TMEM56-RWDD3S4R434 RNU6-960P-201ENST00000364056 120 ntBASIC0.75□□□□□ -2.29
TMEM56-RWDD3S4R434 MIR146A-201ENST00000385201 99 ntBASIC0.75□□□□□ -2.29
TMEM56-RWDD3S4R434 RNU6-482P-201ENST00000391068 107 ntBASIC0.75□□□□□ -2.29
TMEM56-RWDD3S4R434 SNORA12-201ENST00000391162 147 ntBASIC0.75□□□□□ -2.29
TMEM56-RWDD3S4R434 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC0.75□□□□□ -2.29
TMEM56-RWDD3S4R434 AC013410.2-201ENST00000422627 201 ntBASIC0.75□□□□□ -2.29
TMEM56-RWDD3S4R434 RPL23AP30-201ENST00000432419 501 ntBASIC0.75□□□□□ -2.29
TMEM56-RWDD3S4R434 AL008629.1-201ENST00000438615 184 ntBASIC0.75□□□□□ -2.29
TMEM56-RWDD3S4R434 MTND1P30-201ENST00000441241 901 ntBASIC0.75□□□□□ -2.29
TMEM56-RWDD3S4R434 AC134050.1-201ENST00000495088 933 ntBASIC0.75□□□□□ -2.29
TMEM56-RWDD3S4R434 AC116353.3-201ENST00000511215 249 ntBASIC0.75□□□□□ -2.29
TMEM56-RWDD3S4R434 SNORD116-28-201ENST00000516123 91 ntBASIC0.75□□□□□ -2.29
TMEM56-RWDD3S4R434 AL512310.8-201ENST00000550183 120 ntBASIC0.75□□□□□ -2.29
TMEM56-RWDD3S4R434 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.75□□□□□ -2.29
TMEM56-RWDD3S4R434 AC069114.2-201ENST00000604699 304 ntBASIC0.75□□□□□ -2.29
TMEM56-RWDD3S4R434 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.75□□□□□ -2.29
TMEM56-RWDD3S4R434 AL021879.1-201ENST00000611756 288 ntBASIC0.75□□□□□ -2.29
TMEM56-RWDD3S4R434 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.75□□□□□ -2.29
TMEM56-RWDD3S4R434 AC010615.1-201ENST00000594254 1764 ntBASIC0.75□□□□□ -2.29
TMEM56-RWDD3S4R434 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.74□□□□□ -2.29
TMEM56-RWDD3S4R434 RNA5SP99-201ENST00000364020 114 ntBASIC0.74□□□□□ -2.29
TMEM56-RWDD3S4R434 RNU6-298P-201ENST00000390888 96 ntBASIC0.74□□□□□ -2.29
TMEM56-RWDD3S4R434 RAP1BP3-201ENST00000407180 549 ntBASIC0.74□□□□□ -2.29
TMEM56-RWDD3S4R434 SNX2P2-201ENST00000424553 323 ntBASIC0.74□□□□□ -2.29
TMEM56-RWDD3S4R434 AC245047.4-201ENST00000433189 144 ntBASIC0.74□□□□□ -2.29
TMEM56-RWDD3S4R434 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.74□□□□□ -2.29
TMEM56-RWDD3S4R434 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC0.74□□□□□ -2.29
TMEM56-RWDD3S4R434 snoU13.30-201ENST00000458951 104 ntBASIC0.74□□□□□ -2.29
TMEM56-RWDD3S4R434 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.74□□□□□ -2.29
TMEM56-RWDD3S4R434 AL163540.1-201ENST00000485382 386 ntBASIC0.74□□□□□ -2.29
TMEM56-RWDD3S4R434 RNA5SP481-201ENST00000516814 122 ntBASIC0.74□□□□□ -2.29
TMEM56-RWDD3S4R434 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
TMEM56-RWDD3S4R434 AC023050.2-201ENST00000544968 387 ntBASIC0.74□□□□□ -2.29
TMEM56-RWDD3S4R434 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.74□□□□□ -2.29
TMEM56-RWDD3S4R434 MIR4653-201ENST00000585107 83 ntBASIC0.74□□□□□ -2.29
TMEM56-RWDD3S4R434 BX284668.6-201ENST00000606899 438 ntBASIC0.74□□□□□ -2.29
TMEM56-RWDD3S4R434 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.74□□□□□ -2.29
TMEM56-RWDD3S4R434 AC027335.2-201ENST00000624030 375 ntBASIC0.74□□□□□ -2.29
TMEM56-RWDD3S4R434 AL356596.1-201ENST00000624230 379 ntBASIC0.74□□□□□ -2.29
TMEM56-RWDD3S4R434 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.73□□□□□ -2.29
TMEM56-RWDD3S4R434 RNU6-384P-201ENST00000364900 104 ntBASIC0.73□□□□□ -2.29
TMEM56-RWDD3S4R434 RNU1-36P-201ENST00000365130 165 ntBASIC0.73□□□□□ -2.29
TMEM56-RWDD3S4R434 RNU6-723P-201ENST00000383973 107 ntBASIC0.73□□□□□ -2.29
TMEM56-RWDD3S4R434 SNORA25-201ENST00000384384 134 ntBASIC0.73□□□□□ -2.29
TMEM56-RWDD3S4R434 SNORD116-12-201ENST00000384468 92 ntBASIC0.73□□□□□ -2.29
TMEM56-RWDD3S4R434 RNU4-22P-201ENST00000411058 166 ntBASIC0.73□□□□□ -2.29
TMEM56-RWDD3S4R434 RNU2-64P-201ENST00000411315 191 ntBASIC0.73□□□□□ -2.29
TMEM56-RWDD3S4R434 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.73□□□□□ -2.29
TMEM56-RWDD3S4R434 AC099677.2-201ENST00000436385 175 ntBASIC0.73□□□□□ -2.29
TMEM56-RWDD3S4R434 AC007969.2-201ENST00000441891 191 ntBASIC0.73□□□□□ -2.29
TMEM56-RWDD3S4R434 SNRPEP8-201ENST00000442866 260 ntBASIC0.73□□□□□ -2.29
TMEM56-RWDD3S4R434 RPL31P3-201ENST00000458430 332 ntBASIC0.73□□□□□ -2.29
TMEM56-RWDD3S4R434 MTCO3P9-201ENST00000506989 781 ntBASIC0.73□□□□□ -2.29
TMEM56-RWDD3S4R434 RN7SKP88-201ENST00000516847 250 ntBASIC0.73□□□□□ -2.29
TMEM56-RWDD3S4R434 SNORD60.2-201ENST00000516883 86 ntBASIC0.73□□□□□ -2.29
TMEM56-RWDD3S4R434 AC013828.2-201ENST00000532487 235 ntBASIC0.73□□□□□ -2.29
TMEM56-RWDD3S4R434 MTND4LP25-201ENST00000570218 163 ntBASIC0.73□□□□□ -2.29
TMEM56-RWDD3S4R434 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.73□□□□□ -2.29
TMEM56-RWDD3S4R434 MIR548AC-201ENST00000585049 88 ntBASIC0.73□□□□□ -2.29
TMEM56-RWDD3S4R434 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.73□□□□□ -2.29
TMEM56-RWDD3S4R434 DEFB131E-202ENST00000602581 683 ntBASIC0.73□□□□□ -2.29
TMEM56-RWDD3S4R434 AC018889.1-201ENST00000605372 397 ntBASIC0.73□□□□□ -2.29
TMEM56-RWDD3S4R434 AC211469.2-201ENST00000605461 205 ntBASIC0.73□□□□□ -2.29
TMEM56-RWDD3S4R434 AL365434.2-201ENST00000607979 234 ntBASIC0.73□□□□□ -2.29
TMEM56-RWDD3S4R434 AC108747.1-201ENST00000609508 535 ntBASIC0.73□□□□□ -2.29
TMEM56-RWDD3S4R434 7SK.8-201ENST00000612110 250 ntBASIC0.73□□□□□ -2.29
TMEM56-RWDD3S4R434 RNU6-1192P-201ENST00000612197 107 ntBASIC0.73□□□□□ -2.29
TMEM56-RWDD3S4R434 7SK.11-201ENST00000615477 250 ntBASIC0.73□□□□□ -2.29
TMEM56-RWDD3S4R434 RNU6-489P-201ENST00000618289 107 ntBASIC0.73□□□□□ -2.29
TMEM56-RWDD3S4R434 AC006386.1-201ENST00000619436 415 ntBASIC0.73□□□□□ -2.29
TMEM56-RWDD3S4R434 AL121895.2-201ENST00000619558 447 ntBASIC0.73□□□□□ -2.29
TMEM56-RWDD3S4R434 7SK.13-201ENST00000622040 250 ntBASIC0.73□□□□□ -2.29
TMEM56-RWDD3S4R434 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.72□□□□□ -2.29
TMEM56-RWDD3S4R434 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.72□□□□□ -2.29
TMEM56-RWDD3S4R434 RNU4-15P-201ENST00000362613 141 ntBASIC0.72□□□□□ -2.29
TMEM56-RWDD3S4R434 RNU6-1179P-201ENST00000384667 107 ntBASIC0.72□□□□□ -2.29
TMEM56-RWDD3S4R434 RNU6-331P-201ENST00000384724 107 ntBASIC0.72□□□□□ -2.29
TMEM56-RWDD3S4R434 AL136310.1-201ENST00000404926 654 ntBASIC0.72□□□□□ -2.29
TMEM56-RWDD3S4R434 MTCO3P41-201ENST00000414801 328 ntBASIC0.72□□□□□ -2.29
TMEM56-RWDD3S4R434 PIGFP2-201ENST00000421400 651 ntBASIC0.72□□□□□ -2.29
TMEM56-RWDD3S4R434 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.72□□□□□ -2.29
TMEM56-RWDD3S4R434 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.72□□□□□ -2.29
TMEM56-RWDD3S4R434 HSPE1P13-201ENST00000451143 297 ntBASIC0.72□□□□□ -2.29
TMEM56-RWDD3S4R434 ART2BP-201ENST00000453501 499 ntBASIC0.72□□□□□ -2.29
TMEM56-RWDD3S4R434 HMGN2P9-201ENST00000476875 229 ntBASIC0.72□□□□□ -2.29
TMEM56-RWDD3S4R434 AC145146.1-201ENST00000496370 254 ntBASIC0.72□□□□□ -2.29
TMEM56-RWDD3S4R434 AC079140.3-201ENST00000511111 550 ntBASIC0.72□□□□□ -2.29
TMEM56-RWDD3S4R434 RNU2-10P-201ENST00000516375 211 ntBASIC0.72□□□□□ -2.29
TMEM56-RWDD3S4R434 AC068587.4-201ENST00000533893 186 ntBASIC0.72□□□□□ -2.29
TMEM56-RWDD3S4R434 MIR4524B-201ENST00000581569 115 ntBASIC0.72□□□□□ -2.29
TMEM56-RWDD3S4R434 AC068620.3-201ENST00000602749 560 ntBASIC0.72□□□□□ -2.29
TMEM56-RWDD3S4R434 AP000942.3-201ENST00000603702 160 ntBASIC0.72□□□□□ -2.29
TMEM56-RWDD3S4R434 AL020996.3-201ENST00000606617 222 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms