Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
SNX9Q9Y5X1 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.8□□□□□ -1.96
SNX9Q9Y5X1 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.79□□□□□ -1.96
SNX9Q9Y5X1 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
SNX9Q9Y5X1 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.79□□□□□ -1.96
SNX9Q9Y5X1 RNU6-37P-201ENST00000362692 107 ntBASIC2.79□□□□□ -1.96
SNX9Q9Y5X1 Y_RNA.67-201ENST00000362870 100 ntBASIC2.79□□□□□ -1.96
SNX9Q9Y5X1 RNU6-11P-201ENST00000364234 107 ntBASIC2.79□□□□□ -1.96
SNX9Q9Y5X1 RNU4-76P-201ENST00000364509 141 ntBASIC2.79□□□□□ -1.96
SNX9Q9Y5X1 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SNX9Q9Y5X1 RNU6-25P-201ENST00000383873 107 ntBASIC2.79□□□□□ -1.96
SNX9Q9Y5X1 RNU6-1-201ENST00000383898 107 ntBASIC2.79□□□□□ -1.96
SNX9Q9Y5X1 RNU6-48P-201ENST00000384161 107 ntBASIC2.79□□□□□ -1.96
SNX9Q9Y5X1 RNU6-36P-201ENST00000384172 107 ntBASIC2.79□□□□□ -1.96
SNX9Q9Y5X1 RNU6-4P-201ENST00000384205 107 ntBASIC2.79□□□□□ -1.96
SNX9Q9Y5X1 RNU6-5P-201ENST00000384238 107 ntBASIC2.79□□□□□ -1.96
SNX9Q9Y5X1 RNU6-3P-201ENST00000384314 107 ntBASIC2.79□□□□□ -1.96
SNX9Q9Y5X1 RNU6-16P-201ENST00000384385 107 ntBASIC2.79□□□□□ -1.96
SNX9Q9Y5X1 RNU6-15P-201ENST00000384534 107 ntBASIC2.79□□□□□ -1.96
SNX9Q9Y5X1 RNU6-2-201ENST00000384627 107 ntBASIC2.79□□□□□ -1.96
SNX9Q9Y5X1 RNU6-29P-201ENST00000384637 107 ntBASIC2.79□□□□□ -1.96
SNX9Q9Y5X1 RNU6-9-201ENST00000384776 107 ntBASIC2.79□□□□□ -1.96
SNX9Q9Y5X1 RNU6-33P-201ENST00000384793 107 ntBASIC2.79□□□□□ -1.96
SNX9Q9Y5X1 AL356057.2-201ENST00000403318 432 ntBASIC2.79□□□□□ -1.96
SNX9Q9Y5X1 SNORA11.2-201ENST00000408318 127 ntBASIC2.79□□□□□ -1.96
SNX9Q9Y5X1 AC074085.1-201ENST00000413598 418 ntBASIC2.79□□□□□ -1.96
SNX9Q9Y5X1 AC016831.2-201ENST00000417179 352 ntBASIC2.79□□□□□ -1.96
SNX9Q9Y5X1 BPY2DP-201ENST00000422208 265 ntBASIC2.79□□□□□ -1.96
SNX9Q9Y5X1 MTND4P28-201ENST00000426217 387 ntBASIC2.79□□□□□ -1.96
SNX9Q9Y5X1 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.79□□□□□ -1.96
SNX9Q9Y5X1 AC236972.1-201ENST00000433225 199 ntBASIC2.79□□□□□ -1.96
SNX9Q9Y5X1 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.79□□□□□ -1.96
SNX9Q9Y5X1 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.79□□□□□ -1.96
SNX9Q9Y5X1 Y_RNA.632-201ENST00000459189 102 ntBASIC2.79□□□□□ -1.96
SNX9Q9Y5X1 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SNX9Q9Y5X1 RNA5SP282-201ENST00000516355 108 ntBASIC2.79□□□□□ -1.96
SNX9Q9Y5X1 RPPH1-2P-201ENST00000516688 293 ntBASIC2.79□□□□□ -1.96
SNX9Q9Y5X1 ELOCP31-201ENST00000540463 467 ntBASIC2.79□□□□□ -1.96
SNX9Q9Y5X1 AC026371.1-201ENST00000551867 419 ntBASIC2.79□□□□□ -1.96
SNX9Q9Y5X1 LINC00933-203ENST00000559812 219 ntBASIC2.79□□□□□ -1.96
SNX9Q9Y5X1 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.79□□□□□ -1.96
SNX9Q9Y5X1 OR1M4P-201ENST00000589199 287 ntBASIC2.79□□□□□ -1.96
SNX9Q9Y5X1 MTND4LP5-201ENST00000605152 292 ntBASIC2.79□□□□□ -1.96
SNX9Q9Y5X1 RNU6-6P-201ENST00000606623 107 ntBASIC2.79□□□□□ -1.96
SNX9Q9Y5X1 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.79□□□□□ -1.96
SNX9Q9Y5X1 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
SNX9Q9Y5X1 Z82195.2-201ENST00000612348 18351 ntBASIC2.79□□□□□ -1.96
SNX9Q9Y5X1 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
SNX9Q9Y5X1 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.78□□□□□ -1.96
SNX9Q9Y5X1 SNORA25.6-201ENST00000364121 118 ntBASIC2.78□□□□□ -1.96
SNX9Q9Y5X1 Y_RNA.387-201ENST00000383918 102 ntBASIC2.78□□□□□ -1.96
SNX9Q9Y5X1 RNU6-72P-201ENST00000384285 79 ntBASIC2.78□□□□□ -1.96
SNX9Q9Y5X1 Y_RNA.500-201ENST00000384466 111 ntBASIC2.78□□□□□ -1.96
SNX9Q9Y5X1 RNU6-658P-201ENST00000384606 106 ntBASIC2.78□□□□□ -1.96
SNX9Q9Y5X1 AL513475.1-201ENST00000406602 315 ntBASIC2.78□□□□□ -1.96
SNX9Q9Y5X1 NDUFS5P4-201ENST00000412983 318 ntBASIC2.78□□□□□ -1.96
SNX9Q9Y5X1 SNAP23P1-201ENST00000433229 246 ntBASIC2.78□□□□□ -1.96
SNX9Q9Y5X1 AL645568.3-201ENST00000433683 316 ntBASIC2.78□□□□□ -1.96
SNX9Q9Y5X1 AC011816.1-201ENST00000441346 546 ntBASIC2.78□□□□□ -1.96
SNX9Q9Y5X1 snoU109.2-201ENST00000459316 135 ntBASIC2.78□□□□□ -1.96
SNX9Q9Y5X1 RPL23AP45-201ENST00000476406 468 ntBASIC2.78□□□□□ -1.96
SNX9Q9Y5X1 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.78□□□□□ -1.96
SNX9Q9Y5X1 RPS27P27-201ENST00000498779 255 ntBASIC2.78□□□□□ -1.96
SNX9Q9Y5X1 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.78□□□□□ -1.96
SNX9Q9Y5X1 RN7SKP24-201ENST00000515888 284 ntBASIC2.78□□□□□ -1.96
SNX9Q9Y5X1 IMMP1LP2-201ENST00000552954 492 ntBASIC2.78□□□□□ -1.96
SNX9Q9Y5X1 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.78□□□□□ -1.96
SNX9Q9Y5X1 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.78□□□□□ -1.96
SNX9Q9Y5X1 MIR4782-201ENST00000577987 79 ntBASIC2.78□□□□□ -1.96
SNX9Q9Y5X1 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.78□□□□□ -1.96
SNX9Q9Y5X1 AL355598.1-201ENST00000604169 202 ntBASIC2.78□□□□□ -1.96
SNX9Q9Y5X1 MIR6134-201ENST00000617606 109 ntBASIC2.78□□□□□ -1.96
SNX9Q9Y5X1 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
SNX9Q9Y5X1 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SNX9Q9Y5X1 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.78□□□□□ -1.97
SNX9Q9Y5X1 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SNX9Q9Y5X1 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SNX9Q9Y5X1 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SNX9Q9Y5X1 RNU6-942P-201ENST00000363002 107 ntBASIC2.77□□□□□ -1.97
SNX9Q9Y5X1 SET-203ENST00000372688 801 ntTSL 2 BASIC2.77□□□□□ -1.97
SNX9Q9Y5X1 SNORD116-29-201ENST00000384516 83 ntBASIC2.77□□□□□ -1.97
SNX9Q9Y5X1 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.77□□□□□ -1.97
SNX9Q9Y5X1 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.77□□□□□ -1.97
SNX9Q9Y5X1 AF228730.4-201ENST00000421457 183 ntBASIC2.77□□□□□ -1.97
SNX9Q9Y5X1 UBE2V1P4-201ENST00000425374 344 ntBASIC2.77□□□□□ -1.97
SNX9Q9Y5X1 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.77□□□□□ -1.97
SNX9Q9Y5X1 AC009296.1-201ENST00000443146 155 ntBASIC2.77□□□□□ -1.97
SNX9Q9Y5X1 AC013470.1-201ENST00000453438 462 ntBASIC2.77□□□□□ -1.97
SNX9Q9Y5X1 AC130509.1-201ENST00000464158 433 ntBASIC2.77□□□□□ -1.97
SNX9Q9Y5X1 RN7SL297P-201ENST00000483161 293 ntBASIC2.77□□□□□ -1.97
SNX9Q9Y5X1 RPL23AP70-201ENST00000483361 460 ntBASIC2.77□□□□□ -1.97
SNX9Q9Y5X1 SRIP1-201ENST00000489235 288 ntBASIC2.77□□□□□ -1.97
SNX9Q9Y5X1 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.77□□□□□ -1.97
SNX9Q9Y5X1 AC026801.1-201ENST00000497178 464 ntBASIC2.77□□□□□ -1.97
SNX9Q9Y5X1 Y_RNA.687-201ENST00000516558 91 ntBASIC2.77□□□□□ -1.97
SNX9Q9Y5X1 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SNX9Q9Y5X1 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.77□□□□□ -1.97
SNX9Q9Y5X1 FRG2DP-202ENST00000566967 323 ntBASIC2.77□□□□□ -1.97
SNX9Q9Y5X1 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.77□□□□□ -1.97
SNX9Q9Y5X1 AL355877.2-201ENST00000603670 358 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms