Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AC091179.1-201ENST00000461606 579 ntBASIC3.26□□□□□ -1.89
PCDHA3Q9Y5H8 AC107626.1-201ENST00000471084 183 ntBASIC3.26□□□□□ -1.89
PCDHA3Q9Y5H8 RN7SL283P-201ENST00000489055 303 ntBASIC3.26□□□□□ -1.89
PCDHA3Q9Y5H8 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.26□□□□□ -1.89
PCDHA3Q9Y5H8 RNU6-699P-201ENST00000517081 110 ntBASIC3.26□□□□□ -1.89
PCDHA3Q9Y5H8 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.26□□□□□ -1.89
PCDHA3Q9Y5H8 AC090897.2-201ENST00000581715 130 ntBASIC3.26□□□□□ -1.89
PCDHA3Q9Y5H8 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
PCDHA3Q9Y5H8 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDHA3Q9Y5H8 AL158827.2-201ENST00000602494 330 ntBASIC3.26□□□□□ -1.89
PCDHA3Q9Y5H8 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.26□□□□□ -1.89
PCDHA3Q9Y5H8 AL691447.3-201ENST00000635020 330 ntBASIC3.26□□□□□ -1.89
PCDHA3Q9Y5H8 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
PCDHA3Q9Y5H8 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PCDHA3Q9Y5H8 RBBP8P1-201ENST00000449447 1844 ntBASIC3.26□□□□□ -1.89
PCDHA3Q9Y5H8 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHA3Q9Y5H8 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.25□□□□□ -1.89
PCDHA3Q9Y5H8 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.25□□□□□ -1.89
PCDHA3Q9Y5H8 RNY1P16-201ENST00000363063 111 ntBASIC3.25□□□□□ -1.89
PCDHA3Q9Y5H8 Y_RNA.422-201ENST00000384054 114 ntBASIC3.25□□□□□ -1.89
PCDHA3Q9Y5H8 RPL21P10-201ENST00000463521 490 ntBASIC3.25□□□□□ -1.89
PCDHA3Q9Y5H8 AC110794.1-201ENST00000505816 425 ntBASIC3.25□□□□□ -1.89
PCDHA3Q9Y5H8 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.25□□□□□ -1.89
PCDHA3Q9Y5H8 AC009812.2-201ENST00000517657 457 ntBASIC3.25□□□□□ -1.89
PCDHA3Q9Y5H8 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.25□□□□□ -1.89
PCDHA3Q9Y5H8 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.25□□□□□ -1.89
PCDHA3Q9Y5H8 DNAJC8P1-201ENST00000554535 372 ntBASIC3.25□□□□□ -1.89
PCDHA3Q9Y5H8 HMGB1P24-202ENST00000615653 685 ntBASIC3.25□□□□□ -1.89
PCDHA3Q9Y5H8 U6.105-201ENST00000637379 88 ntBASIC3.25□□□□□ -1.89
PCDHA3Q9Y5H8 AC091564.4-201ENST00000533934 2194 ntBASIC3.25□□□□□ -1.89
PCDHA3Q9Y5H8 AC009541.1-201ENST00000438279 2662 ntBASIC3.25□□□□□ -1.89
PCDHA3Q9Y5H8 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PCDHA3Q9Y5H8 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
PCDHA3Q9Y5H8 MIR208A-201ENST00000362287 71 ntBASIC3.24□□□□□ -1.89
PCDHA3Q9Y5H8 Y_RNA.48-201ENST00000362710 103 ntBASIC3.24□□□□□ -1.89
PCDHA3Q9Y5H8 Y_RNA.123-201ENST00000363338 102 ntBASIC3.24□□□□□ -1.89
PCDHA3Q9Y5H8 RNU6-1141P-201ENST00000364520 107 ntBASIC3.24□□□□□ -1.89
PCDHA3Q9Y5H8 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PCDHA3Q9Y5H8 SNORA22B-201ENST00000383876 138 ntBASIC3.24□□□□□ -1.89
PCDHA3Q9Y5H8 RNU6-1222P-201ENST00000384615 107 ntBASIC3.24□□□□□ -1.89
PCDHA3Q9Y5H8 Y_RNA.577-201ENST00000384794 101 ntBASIC3.24□□□□□ -1.89
PCDHA3Q9Y5H8 MIR544A-201ENST00000384855 91 ntBASIC3.24□□□□□ -1.89
PCDHA3Q9Y5H8 AL357075.1-201ENST00000404107 726 ntBASIC3.24□□□□□ -1.89
PCDHA3Q9Y5H8 EIF1AXP1-201ENST00000419267 435 ntBASIC3.24□□□□□ -1.89
PCDHA3Q9Y5H8 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDHA3Q9Y5H8 AC004383.1-201ENST00000438135 289 ntBASIC3.24□□□□□ -1.89
PCDHA3Q9Y5H8 AC099799.1-201ENST00000439809 192 ntBASIC3.24□□□□□ -1.89
PCDHA3Q9Y5H8 AL118496.2-201ENST00000448300 230 ntBASIC3.24□□□□□ -1.89
PCDHA3Q9Y5H8 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.24□□□□□ -1.89
PCDHA3Q9Y5H8 RN7SL20P-201ENST00000488827 297 ntBASIC3.24□□□□□ -1.89
PCDHA3Q9Y5H8 RPS27P26-201ENST00000494583 239 ntBASIC3.24□□□□□ -1.89
PCDHA3Q9Y5H8 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.24□□□□□ -1.89
PCDHA3Q9Y5H8 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDHA3Q9Y5H8 RNU6-120P-201ENST00000516077 103 ntBASIC3.24□□□□□ -1.89
PCDHA3Q9Y5H8 RNU6-988P-201ENST00000519081 107 ntBASIC3.24□□□□□ -1.89
PCDHA3Q9Y5H8 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDHA3Q9Y5H8 AC023442.1-201ENST00000531247 422 ntBASIC3.24□□□□□ -1.89
PCDHA3Q9Y5H8 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.24□□□□□ -1.89
PCDHA3Q9Y5H8 MIR5701-3-201ENST00000578890 82 ntBASIC3.24□□□□□ -1.89
PCDHA3Q9Y5H8 MIR5701-1-201ENST00000585138 82 ntBASIC3.24□□□□□ -1.89
PCDHA3Q9Y5H8 MIR5701-2-201ENST00000615634 82 ntBASIC3.24□□□□□ -1.89
PCDHA3Q9Y5H8 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.24□□□□□ -1.89
PCDHA3Q9Y5H8 MTND5P1-201ENST00000445440 1375 ntBASIC3.24□□□□□ -1.89
PCDHA3Q9Y5H8 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHA3Q9Y5H8 Y_RNA.216-201ENST00000364205 93 ntBASIC3.23□□□□□ -1.89
PCDHA3Q9Y5H8 RNA5SP387-201ENST00000364226 106 ntBASIC3.23□□□□□ -1.89
PCDHA3Q9Y5H8 SNORA33.2-201ENST00000365413 134 ntBASIC3.23□□□□□ -1.89
PCDHA3Q9Y5H8 Y_RNA.428-201ENST00000384078 102 ntBASIC3.23□□□□□ -1.89
PCDHA3Q9Y5H8 SNORA7.4-201ENST00000384249 137 ntBASIC3.23□□□□□ -1.89
PCDHA3Q9Y5H8 MIR767-201ENST00000390228 109 ntBASIC3.23□□□□□ -1.89
PCDHA3Q9Y5H8 RNA5SP354-201ENST00000391247 136 ntBASIC3.23□□□□□ -1.89
PCDHA3Q9Y5H8 RNA5SP274-201ENST00000410484 108 ntBASIC3.23□□□□□ -1.89
PCDHA3Q9Y5H8 AC008267.5-201ENST00000424928 265 ntBASIC3.23□□□□□ -1.89
PCDHA3Q9Y5H8 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.23□□□□□ -1.89
PCDHA3Q9Y5H8 Z75741.1-201ENST00000446793 314 ntBASIC3.23□□□□□ -1.89
PCDHA3Q9Y5H8 AL513124.1-201ENST00000450410 614 ntBASIC3.23□□□□□ -1.89
PCDHA3Q9Y5H8 RPS26P21-201ENST00000475397 348 ntBASIC3.23□□□□□ -1.89
PCDHA3Q9Y5H8 AC074250.1-201ENST00000511117 192 ntBASIC3.23□□□□□ -1.89
PCDHA3Q9Y5H8 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.23□□□□□ -1.89
PCDHA3Q9Y5H8 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.23□□□□□ -1.89
PCDHA3Q9Y5H8 AC016256.1-201ENST00000547971 354 ntBASIC3.23□□□□□ -1.89
PCDHA3Q9Y5H8 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.23□□□□□ -1.89
PCDHA3Q9Y5H8 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.23□□□□□ -1.89
PCDHA3Q9Y5H8 AC060766.3-201ENST00000591442 263 ntBASIC3.23□□□□□ -1.89
PCDHA3Q9Y5H8 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.23□□□□□ -1.89
PCDHA3Q9Y5H8 MIR7975-201ENST00000619350 68 ntBASIC3.23□□□□□ -1.89
PCDHA3Q9Y5H8 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.23□□□□□ -1.89
PCDHA3Q9Y5H8 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHA3Q9Y5H8 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
PCDHA3Q9Y5H8 RNU1-140P-201ENST00000365040 165 ntBASIC3.22□□□□□ -1.89
PCDHA3Q9Y5H8 RNU1-115P-201ENST00000365329 160 ntBASIC3.22□□□□□ -1.89
PCDHA3Q9Y5H8 SNORD15B-201ENST00000384714 146 ntBASIC3.22□□□□□ -1.89
PCDHA3Q9Y5H8 RNU6-308P-201ENST00000390957 107 ntBASIC3.22□□□□□ -1.89
PCDHA3Q9Y5H8 SNORA11.1-201ENST00000408133 129 ntBASIC3.22□□□□□ -1.89
PCDHA3Q9Y5H8 RN7SKP61-201ENST00000410642 295 ntBASIC3.22□□□□□ -1.89
PCDHA3Q9Y5H8 AC078809.1-201ENST00000427601 140 ntBASIC3.22□□□□□ -1.89
PCDHA3Q9Y5H8 OSTCP8-201ENST00000445117 448 ntBASIC3.22□□□□□ -1.89
PCDHA3Q9Y5H8 RPL30P10-201ENST00000488148 337 ntBASIC3.22□□□□□ -1.89
PCDHA3Q9Y5H8 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.22□□□□□ -1.89
PCDHA3Q9Y5H8 GZMAP1-201ENST00000503054 631 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms