Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC013791.1-201ENST00000616619 62 ntBASIC4.35□□□□□ -1.71
PCDHGA11Q9Y5H2 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.35□□□□□ -1.71
PCDHGA11Q9Y5H2 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHGA11Q9Y5H2 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHGA11Q9Y5H2 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.35□□□□□ -1.71
PCDHGA11Q9Y5H2 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHGA11Q9Y5H2 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
PCDHGA11Q9Y5H2 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHGA11Q9Y5H2 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PCDHGA11Q9Y5H2 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.34□□□□□ -1.71
PCDHGA11Q9Y5H2 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.34□□□□□ -1.71
PCDHGA11Q9Y5H2 RNU1-44P-201ENST00000384453 163 ntBASIC4.34□□□□□ -1.71
PCDHGA11Q9Y5H2 SNORA8.3-201ENST00000384679 139 ntBASIC4.34□□□□□ -1.71
PCDHGA11Q9Y5H2 RNU6-376P-201ENST00000384731 106 ntBASIC4.34□□□□□ -1.71
PCDHGA11Q9Y5H2 RNU6-1168P-201ENST00000390831 104 ntBASIC4.34□□□□□ -1.71
PCDHGA11Q9Y5H2 AC023141.4-201ENST00000412031 328 ntBASIC4.34□□□□□ -1.71
PCDHGA11Q9Y5H2 AL365496.1-201ENST00000426885 215 ntBASIC4.34□□□□□ -1.71
PCDHGA11Q9Y5H2 TOMM22P2-201ENST00000430735 237 ntBASIC4.34□□□□□ -1.71
PCDHGA11Q9Y5H2 RPL23AP93-201ENST00000440847 484 ntBASIC4.34□□□□□ -1.71
PCDHGA11Q9Y5H2 Z75741.1-201ENST00000446793 314 ntBASIC4.34□□□□□ -1.71
PCDHGA11Q9Y5H2 HMGN2P16-201ENST00000456802 261 ntBASIC4.34□□□□□ -1.71
PCDHGA11Q9Y5H2 AC091179.1-201ENST00000461606 579 ntBASIC4.34□□□□□ -1.71
PCDHGA11Q9Y5H2 RN7SL610P-201ENST00000463845 291 ntBASIC4.34□□□□□ -1.71
PCDHGA11Q9Y5H2 AC105137.1-201ENST00000484355 562 ntBASIC4.34□□□□□ -1.71
PCDHGA11Q9Y5H2 AC008897.1-201ENST00000494006 347 ntBASIC4.34□□□□□ -1.71
PCDHGA11Q9Y5H2 PPBPP1-201ENST00000510807 373 ntBASIC4.34□□□□□ -1.71
PCDHGA11Q9Y5H2 AC021269.2-201ENST00000532318 330 ntBASIC4.34□□□□□ -1.71
PCDHGA11Q9Y5H2 MIR4431-201ENST00000579990 94 ntBASIC4.34□□□□□ -1.71
PCDHGA11Q9Y5H2 MIR4270-201ENST00000581799 70 ntBASIC4.34□□□□□ -1.71
PCDHGA11Q9Y5H2 RN7SL690P-201ENST00000582087 240 ntBASIC4.34□□□□□ -1.71
PCDHGA11Q9Y5H2 MIR5006-201ENST00000583027 110 ntBASIC4.34□□□□□ -1.71
PCDHGA11Q9Y5H2 AC012493.2-201ENST00000595083 291 ntBASIC4.34□□□□□ -1.71
PCDHGA11Q9Y5H2 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.34□□□□□ -1.71
PCDHGA11Q9Y5H2 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PCDHGA11Q9Y5H2 AC010329.5-201ENST00000623497 2174 ntBASIC4.34□□□□□ -1.72
PCDHGA11Q9Y5H2 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
PCDHGA11Q9Y5H2 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.72
PCDHGA11Q9Y5H2 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHGA11Q9Y5H2 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
PCDHGA11Q9Y5H2 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
PCDHGA11Q9Y5H2 Y_RNA.81-201ENST00000362997 102 ntBASIC4.33□□□□□ -1.72
PCDHGA11Q9Y5H2 RNU6-801P-201ENST00000364087 105 ntBASIC4.33□□□□□ -1.72
PCDHGA11Q9Y5H2 RNA5SP22-201ENST00000365393 109 ntBASIC4.33□□□□□ -1.72
PCDHGA11Q9Y5H2 AL031003.1-201ENST00000404229 172 ntBASIC4.33□□□□□ -1.72
PCDHGA11Q9Y5H2 RNA5SP239-201ENST00000410218 129 ntBASIC4.33□□□□□ -1.72
PCDHGA11Q9Y5H2 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.33□□□□□ -1.72
PCDHGA11Q9Y5H2 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.33□□□□□ -1.72
PCDHGA11Q9Y5H2 AC006466.1-201ENST00000438721 289 ntBASIC4.33□□□□□ -1.72
PCDHGA11Q9Y5H2 AC011753.3-201ENST00000443436 406 ntBASIC4.33□□□□□ -1.72
PCDHGA11Q9Y5H2 AC010409.1-201ENST00000487382 476 ntBASIC4.33□□□□□ -1.72
PCDHGA11Q9Y5H2 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC4.33□□□□□ -1.72
PCDHGA11Q9Y5H2 AC025281.1-201ENST00000567026 265 ntBASIC4.33□□□□□ -1.72
PCDHGA11Q9Y5H2 MIR548X2-201ENST00000579776 100 ntBASIC4.33□□□□□ -1.72
PCDHGA11Q9Y5H2 MIR4480-201ENST00000582492 71 ntBASIC4.33□□□□□ -1.72
PCDHGA11Q9Y5H2 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.33□□□□□ -1.72
PCDHGA11Q9Y5H2 AC091953.3-201ENST00000623220 236 ntBASIC4.33□□□□□ -1.72
PCDHGA11Q9Y5H2 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
PCDHGA11Q9Y5H2 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.33□□□□□ -1.72
PCDHGA11Q9Y5H2 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.33□□□□□ -1.72
PCDHGA11Q9Y5H2 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHGA11Q9Y5H2 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHGA11Q9Y5H2 AC016588.2-201ENST00000632484 3021 ntBASIC4.32□□□□□ -1.72
PCDHGA11Q9Y5H2 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PCDHGA11Q9Y5H2 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.32□□□□□ -1.72
PCDHGA11Q9Y5H2 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHGA11Q9Y5H2 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHGA11Q9Y5H2 RNA5SP307-201ENST00000362863 116 ntBASIC4.32□□□□□ -1.72
PCDHGA11Q9Y5H2 SNORD113.2-201ENST00000364166 89 ntBASIC4.32□□□□□ -1.72
PCDHGA11Q9Y5H2 Y_RNA.293-201ENST00000364908 93 ntBASIC4.32□□□□□ -1.72
PCDHGA11Q9Y5H2 RNU6-578P-201ENST00000390980 103 ntBASIC4.32□□□□□ -1.72
PCDHGA11Q9Y5H2 RNU6-735P-201ENST00000410612 107 ntBASIC4.32□□□□□ -1.72
PCDHGA11Q9Y5H2 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDHGA11Q9Y5H2 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.32□□□□□ -1.72
PCDHGA11Q9Y5H2 RN7SL132P-201ENST00000478131 296 ntBASIC4.32□□□□□ -1.72
PCDHGA11Q9Y5H2 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.32□□□□□ -1.72
PCDHGA11Q9Y5H2 RNU6-426P-201ENST00000516464 97 ntBASIC4.32□□□□□ -1.72
PCDHGA11Q9Y5H2 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.32□□□□□ -1.72
PCDHGA11Q9Y5H2 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHGA11Q9Y5H2 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.32□□□□□ -1.72
PCDHGA11Q9Y5H2 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.32□□□□□ -1.72
PCDHGA11Q9Y5H2 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHGA11Q9Y5H2 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.32□□□□□ -1.72
PCDHGA11Q9Y5H2 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDHGA11Q9Y5H2 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDHGA11Q9Y5H2 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDHGA11Q9Y5H2 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.31□□□□□ -1.72
PCDHGA11Q9Y5H2 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHGA11Q9Y5H2 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHGA11Q9Y5H2 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHGA11Q9Y5H2 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
PCDHGA11Q9Y5H2 RNU6-899P-201ENST00000363947 107 ntBASIC4.31□□□□□ -1.72
PCDHGA11Q9Y5H2 SNORA70F-201ENST00000384142 135 ntBASIC4.31□□□□□ -1.72
PCDHGA11Q9Y5H2 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHGA11Q9Y5H2 AL714022.1-201ENST00000439897 151 ntBASIC4.31□□□□□ -1.72
PCDHGA11Q9Y5H2 AC008267.6-201ENST00000441664 139 ntBASIC4.31□□□□□ -1.72
PCDHGA11Q9Y5H2 RNU7-23P-201ENST00000459465 62 ntBASIC4.31□□□□□ -1.72
PCDHGA11Q9Y5H2 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.31□□□□□ -1.72
PCDHGA11Q9Y5H2 AC107027.2-201ENST00000512197 115 ntBASIC4.31□□□□□ -1.72
PCDHGA11Q9Y5H2 AC015795.1-201ENST00000513669 327 ntBASIC4.31□□□□□ -1.72
PCDHGA11Q9Y5H2 RNU7-121P-201ENST00000516604 62 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms