Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC090096.1-201ENST00000489168 390 ntBASIC3.34□□□□□ -1.87
PCDHGA3Q9Y5H0 AC022447.4-201ENST00000504053 364 ntBASIC3.34□□□□□ -1.87
PCDHGA3Q9Y5H0 RAC1P5-201ENST00000512182 576 ntBASIC3.34□□□□□ -1.87
PCDHGA3Q9Y5H0 AC009812.2-201ENST00000517657 457 ntBASIC3.34□□□□□ -1.87
PCDHGA3Q9Y5H0 HSPE1P4-201ENST00000550617 308 ntBASIC3.34□□□□□ -1.87
PCDHGA3Q9Y5H0 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.34□□□□□ -1.87
PCDHGA3Q9Y5H0 HMGB1P24-202ENST00000615653 685 ntBASIC3.34□□□□□ -1.87
PCDHGA3Q9Y5H0 AL732372.2-225ENST00000642124 456 ntBASIC3.34□□□□□ -1.87
PCDHGA3Q9Y5H0 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.34□□□□□ -1.88
PCDHGA3Q9Y5H0 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
PCDHGA3Q9Y5H0 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
PCDHGA3Q9Y5H0 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
PCDHGA3Q9Y5H0 AL359854.1-201ENST00000614203 1594 ntBASIC3.34□□□□□ -1.88
PCDHGA3Q9Y5H0 AC233981.2-201ENST00000611524 1614 ntBASIC3.33□□□□□ -1.88
PCDHGA3Q9Y5H0 MIR369-201ENST00000362155 70 ntBASIC3.33□□□□□ -1.88
PCDHGA3Q9Y5H0 Y_RNA.202-201ENST00000364083 110 ntBASIC3.33□□□□□ -1.88
PCDHGA3Q9Y5H0 Y_RNA.252-201ENST00000364556 101 ntBASIC3.33□□□□□ -1.88
PCDHGA3Q9Y5H0 RNU4-56P-201ENST00000364700 142 ntBASIC3.33□□□□□ -1.88
PCDHGA3Q9Y5H0 RNU6-968P-201ENST00000384076 107 ntBASIC3.33□□□□□ -1.88
PCDHGA3Q9Y5H0 Y_RNA.428-201ENST00000384078 102 ntBASIC3.33□□□□□ -1.88
PCDHGA3Q9Y5H0 Y_RNA.577-201ENST00000384794 101 ntBASIC3.33□□□□□ -1.88
PCDHGA3Q9Y5H0 SAR1AP2-201ENST00000392696 594 ntBASIC3.33□□□□□ -1.88
PCDHGA3Q9Y5H0 RNA5SP293-201ENST00000410527 113 ntBASIC3.33□□□□□ -1.88
PCDHGA3Q9Y5H0 MTCYBP10-201ENST00000424905 650 ntBASIC3.33□□□□□ -1.88
PCDHGA3Q9Y5H0 AC244670.1-201ENST00000436879 112 ntBASIC3.33□□□□□ -1.88
PCDHGA3Q9Y5H0 MTCYBP6-201ENST00000441810 138 ntBASIC3.33□□□□□ -1.88
PCDHGA3Q9Y5H0 AC115115.1-201ENST00000449927 248 ntBASIC3.33□□□□□ -1.88
PCDHGA3Q9Y5H0 RPS4XP2-201ENST00000458402 793 ntBASIC3.33□□□□□ -1.88
PCDHGA3Q9Y5H0 RPS29P12-201ENST00000460178 152 ntBASIC3.33□□□□□ -1.88
PCDHGA3Q9Y5H0 AP001324.2-201ENST00000461163 319 ntBASIC3.33□□□□□ -1.88
PCDHGA3Q9Y5H0 RPL31P41-201ENST00000477967 372 ntBASIC3.33□□□□□ -1.88
PCDHGA3Q9Y5H0 RPL30P10-201ENST00000488148 337 ntBASIC3.33□□□□□ -1.88
PCDHGA3Q9Y5H0 RNU6-567P-201ENST00000516746 107 ntBASIC3.33□□□□□ -1.88
PCDHGA3Q9Y5H0 AP006245.1-201ENST00000522549 120 ntBASIC3.33□□□□□ -1.88
PCDHGA3Q9Y5H0 CBX3P8-201ENST00000532412 525 ntBASIC3.33□□□□□ -1.88
PCDHGA3Q9Y5H0 AC021231.3-201ENST00000558497 370 ntBASIC3.33□□□□□ -1.88
PCDHGA3Q9Y5H0 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.33□□□□□ -1.88
PCDHGA3Q9Y5H0 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.33□□□□□ -1.88
PCDHGA3Q9Y5H0 MIR3136-201ENST00000583498 78 ntBASIC3.33□□□□□ -1.88
PCDHGA3Q9Y5H0 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.33□□□□□ -1.88
PCDHGA3Q9Y5H0 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHGA3Q9Y5H0 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
PCDHGA3Q9Y5H0 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHGA3Q9Y5H0 AL353743.1-202ENST00000431724 1695 ntBASIC3.33□□□□□ -1.88
PCDHGA3Q9Y5H0 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.33□□□□□ -1.88
PCDHGA3Q9Y5H0 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PCDHGA3Q9Y5H0 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDHGA3Q9Y5H0 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.32□□□□□ -1.88
PCDHGA3Q9Y5H0 RNU1-75P-201ENST00000347264 129 ntBASIC3.32□□□□□ -1.88
PCDHGA3Q9Y5H0 Y_RNA.111-201ENST00000363248 100 ntBASIC3.32□□□□□ -1.88
PCDHGA3Q9Y5H0 RNU4-9P-201ENST00000364951 139 ntBASIC3.32□□□□□ -1.88
PCDHGA3Q9Y5H0 AC117470.1-201ENST00000381974 330 ntBASIC3.32□□□□□ -1.88
PCDHGA3Q9Y5H0 RNU6-1286P-201ENST00000383871 107 ntBASIC3.32□□□□□ -1.88
PCDHGA3Q9Y5H0 Y_RNA.422-201ENST00000384054 114 ntBASIC3.32□□□□□ -1.88
PCDHGA3Q9Y5H0 U3.39-201ENST00000408569 239 ntBASIC3.32□□□□□ -1.88
PCDHGA3Q9Y5H0 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.32□□□□□ -1.88
PCDHGA3Q9Y5H0 AC243428.1-201ENST00000421099 264 ntBASIC3.32□□□□□ -1.88
PCDHGA3Q9Y5H0 AC079354.2-201ENST00000453523 154 ntBASIC3.32□□□□□ -1.88
PCDHGA3Q9Y5H0 RPL30P12-201ENST00000474666 353 ntBASIC3.32□□□□□ -1.88
PCDHGA3Q9Y5H0 RNA5SP112-201ENST00000515937 99 ntBASIC3.32□□□□□ -1.88
PCDHGA3Q9Y5H0 SNORD116.3-201ENST00000517176 78 ntBASIC3.32□□□□□ -1.88
PCDHGA3Q9Y5H0 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.32□□□□□ -1.88
PCDHGA3Q9Y5H0 AL590705.4-201ENST00000532209 134 ntBASIC3.32□□□□□ -1.88
PCDHGA3Q9Y5H0 AC079598.5-201ENST00000547460 117 ntBASIC3.32□□□□□ -1.88
PCDHGA3Q9Y5H0 AC006557.5-201ENST00000603126 811 ntBASIC3.32□□□□□ -1.88
PCDHGA3Q9Y5H0 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDHGA3Q9Y5H0 MIR7112-201ENST00000616126 65 ntBASIC3.32□□□□□ -1.88
PCDHGA3Q9Y5H0 U4.6-201ENST00000621618 127 ntBASIC3.32□□□□□ -1.88
PCDHGA3Q9Y5H0 uc_338.22-201ENST00000622722 187 ntBASIC3.32□□□□□ -1.88
PCDHGA3Q9Y5H0 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDHGA3Q9Y5H0 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDHGA3Q9Y5H0 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
PCDHGA3Q9Y5H0 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PCDHGA3Q9Y5H0 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHGA3Q9Y5H0 RNU6-1115P-201ENST00000362490 106 ntBASIC3.31□□□□□ -1.88
PCDHGA3Q9Y5H0 RNU6-1285P-201ENST00000363480 105 ntBASIC3.31□□□□□ -1.88
PCDHGA3Q9Y5H0 Y_RNA.463-201ENST00000384271 102 ntBASIC3.31□□□□□ -1.88
PCDHGA3Q9Y5H0 Y_RNA.533-201ENST00000384596 114 ntBASIC3.31□□□□□ -1.88
PCDHGA3Q9Y5H0 AC007098.1-201ENST00000420122 367 ntBASIC3.31□□□□□ -1.88
PCDHGA3Q9Y5H0 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.31□□□□□ -1.88
PCDHGA3Q9Y5H0 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.31□□□□□ -1.88
PCDHGA3Q9Y5H0 GPM6BP3-201ENST00000442797 145 ntBASIC3.31□□□□□ -1.88
PCDHGA3Q9Y5H0 AL137792.2-201ENST00000443484 235 ntBASIC3.31□□□□□ -1.88
PCDHGA3Q9Y5H0 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDHGA3Q9Y5H0 MIR2053-201ENST00000459295 91 ntBASIC3.31□□□□□ -1.88
PCDHGA3Q9Y5H0 snoU13.14-201ENST00000459372 104 ntBASIC3.31□□□□□ -1.88
PCDHGA3Q9Y5H0 RN7SL594P-201ENST00000470590 287 ntBASIC3.31□□□□□ -1.88
PCDHGA3Q9Y5H0 RNU7-175P-201ENST00000515915 61 ntBASIC3.31□□□□□ -1.88
PCDHGA3Q9Y5H0 RNU6-1153P-201ENST00000516760 105 ntBASIC3.31□□□□□ -1.88
PCDHGA3Q9Y5H0 RNU7-4P-201ENST00000516961 62 ntBASIC3.31□□□□□ -1.88
PCDHGA3Q9Y5H0 RNA5SP380-201ENST00000517190 98 ntBASIC3.31□□□□□ -1.88
PCDHGA3Q9Y5H0 IGKV2-26-201ENST00000518305 343 ntBASIC3.31□□□□□ -1.88
PCDHGA3Q9Y5H0 RNU6-988P-201ENST00000519081 107 ntBASIC3.31□□□□□ -1.88
PCDHGA3Q9Y5H0 MIR4765-201ENST00000585007 77 ntBASIC3.31□□□□□ -1.88
PCDHGA3Q9Y5H0 AC060766.3-201ENST00000591442 263 ntBASIC3.31□□□□□ -1.88
PCDHGA3Q9Y5H0 SNRPGP17-201ENST00000603780 214 ntBASIC3.31□□□□□ -1.88
PCDHGA3Q9Y5H0 Y_RNA.812-201ENST00000610788 101 ntBASIC3.31□□□□□ -1.88
PCDHGA3Q9Y5H0 Y_RNA.784-201ENST00000613803 101 ntBASIC3.31□□□□□ -1.88
PCDHGA3Q9Y5H0 Y_RNA.787-201ENST00000616522 101 ntBASIC3.31□□□□□ -1.88
PCDHGA3Q9Y5H0 Y_RNA.780-201ENST00000617336 101 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms