Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 AL035666.1-201ENST00000446195 348 ntBASIC3.3□□□□□ -1.88
PCDHGA9Q9Y5G4 AL353705.4-201ENST00000449661 238 ntBASIC3.3□□□□□ -1.88
PCDHGA9Q9Y5G4 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHGA9Q9Y5G4 SNRPGP7-201ENST00000469016 106 ntBASIC3.3□□□□□ -1.88
PCDHGA9Q9Y5G4 RPS4XP22-201ENST00000480755 780 ntBASIC3.3□□□□□ -1.88
PCDHGA9Q9Y5G4 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHGA9Q9Y5G4 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHGA9Q9Y5G4 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHGA9Q9Y5G4 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.3□□□□□ -1.88
PCDHGA9Q9Y5G4 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.3□□□□□ -1.88
PCDHGA9Q9Y5G4 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
PCDHGA9Q9Y5G4 AC104581.2-201ENST00000572227 430 ntBASIC3.3□□□□□ -1.88
PCDHGA9Q9Y5G4 MIR5571-201ENST00000577998 113 ntBASIC3.3□□□□□ -1.88
PCDHGA9Q9Y5G4 AC008739.2-201ENST00000597006 317 ntBASIC3.3□□□□□ -1.88
PCDHGA9Q9Y5G4 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDHGA9Q9Y5G4 AC073410.2-201ENST00000603240 332 ntBASIC3.3□□□□□ -1.88
PCDHGA9Q9Y5G4 AL133393.1-201ENST00000603277 287 ntBASIC3.3□□□□□ -1.88
PCDHGA9Q9Y5G4 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHGA9Q9Y5G4 AC005014.2-201ENST00000607795 599 ntBASIC3.3□□□□□ -1.88
PCDHGA9Q9Y5G4 AL159153.1-201ENST00000619688 317 ntBASIC3.3□□□□□ -1.88
PCDHGA9Q9Y5G4 MIR8057-201ENST00000620957 69 ntBASIC3.3□□□□□ -1.88
PCDHGA9Q9Y5G4 AC093908.1-201ENST00000623125 8092 ntBASIC3.3□□□□□ -1.88
PCDHGA9Q9Y5G4 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDHGA9Q9Y5G4 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDHGA9Q9Y5G4 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
PCDHGA9Q9Y5G4 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PCDHGA9Q9Y5G4 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.29□□□□□ -1.88
PCDHGA9Q9Y5G4 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCDHGA9Q9Y5G4 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.29□□□□□ -1.88
PCDHGA9Q9Y5G4 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCDHGA9Q9Y5G4 AC092435.3-201ENST00000565538 3654 ntBASIC3.29□□□□□ -1.88
PCDHGA9Q9Y5G4 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PCDHGA9Q9Y5G4 RNU6-1159P-201ENST00000362933 107 ntBASIC3.29□□□□□ -1.88
PCDHGA9Q9Y5G4 RNU6-486P-201ENST00000363116 107 ntBASIC3.29□□□□□ -1.88
PCDHGA9Q9Y5G4 RNU1-115P-201ENST00000365329 160 ntBASIC3.29□□□□□ -1.88
PCDHGA9Q9Y5G4 Y_RNA.394-201ENST00000383942 103 ntBASIC3.29□□□□□ -1.88
PCDHGA9Q9Y5G4 RNU6-474P-201ENST00000384243 107 ntBASIC3.29□□□□□ -1.88
PCDHGA9Q9Y5G4 RNU1-57P-201ENST00000384491 166 ntBASIC3.29□□□□□ -1.88
PCDHGA9Q9Y5G4 MIR625-201ENST00000385047 85 ntBASIC3.29□□□□□ -1.88
PCDHGA9Q9Y5G4 AC018865.2-201ENST00000423631 129 ntBASIC3.29□□□□□ -1.88
PCDHGA9Q9Y5G4 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.29□□□□□ -1.88
PCDHGA9Q9Y5G4 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.29□□□□□ -1.88
PCDHGA9Q9Y5G4 SNORA59A-201ENST00000459326 152 ntBASIC3.29□□□□□ -1.88
PCDHGA9Q9Y5G4 AIG1P1-201ENST00000503376 148 ntBASIC3.29□□□□□ -1.88
PCDHGA9Q9Y5G4 MRPS36P2-201ENST00000512569 299 ntBASIC3.29□□□□□ -1.88
PCDHGA9Q9Y5G4 PHBP14-201ENST00000512887 367 ntBASIC3.29□□□□□ -1.88
PCDHGA9Q9Y5G4 AC091144.1-201ENST00000519573 138 ntBASIC3.29□□□□□ -1.88
PCDHGA9Q9Y5G4 NDUFB9P3-201ENST00000521269 501 ntBASIC3.29□□□□□ -1.88
PCDHGA9Q9Y5G4 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.29□□□□□ -1.88
PCDHGA9Q9Y5G4 AC008011.1-201ENST00000545989 227 ntBASIC3.29□□□□□ -1.88
PCDHGA9Q9Y5G4 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.29□□□□□ -1.88
PCDHGA9Q9Y5G4 AC020661.2-201ENST00000560114 134 ntBASIC3.29□□□□□ -1.88
PCDHGA9Q9Y5G4 MIR5701-3-201ENST00000578890 82 ntBASIC3.29□□□□□ -1.88
PCDHGA9Q9Y5G4 MIR3171-201ENST00000584270 74 ntBASIC3.29□□□□□ -1.88
PCDHGA9Q9Y5G4 MIR5701-1-201ENST00000585138 82 ntBASIC3.29□□□□□ -1.88
PCDHGA9Q9Y5G4 AL158827.2-201ENST00000602494 330 ntBASIC3.29□□□□□ -1.88
PCDHGA9Q9Y5G4 MIR5701-2-201ENST00000615634 82 ntBASIC3.29□□□□□ -1.88
PCDHGA9Q9Y5G4 SCARNA4-201ENST00000629045 128 ntBASIC3.29□□□□□ -1.88
PCDHGA9Q9Y5G4 AL691447.3-201ENST00000635020 330 ntBASIC3.29□□□□□ -1.88
PCDHGA9Q9Y5G4 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PCDHGA9Q9Y5G4 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PCDHGA9Q9Y5G4 AC058791.1-201ENST00000608412 3198 ntBASIC3.28□□□□□ -1.88
PCDHGA9Q9Y5G4 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PCDHGA9Q9Y5G4 Y_RNA.28-201ENST00000362554 111 ntBASIC3.28□□□□□ -1.88
PCDHGA9Q9Y5G4 RNU4-35P-201ENST00000362588 141 ntBASIC3.28□□□□□ -1.88
PCDHGA9Q9Y5G4 RNU6-212P-201ENST00000362642 104 ntBASIC3.28□□□□□ -1.88
PCDHGA9Q9Y5G4 Y_RNA.48-201ENST00000362710 103 ntBASIC3.28□□□□□ -1.88
PCDHGA9Q9Y5G4 SNORA26.3-201ENST00000391119 136 ntBASIC3.28□□□□□ -1.88
PCDHGA9Q9Y5G4 AL133475.1-201ENST00000404414 305 ntBASIC3.28□□□□□ -1.88
PCDHGA9Q9Y5G4 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDHGA9Q9Y5G4 AC115115.1-201ENST00000449927 248 ntBASIC3.28□□□□□ -1.88
PCDHGA9Q9Y5G4 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.28□□□□□ -1.88
PCDHGA9Q9Y5G4 RPL27AP5-201ENST00000469428 449 ntBASIC3.28□□□□□ -1.88
PCDHGA9Q9Y5G4 RPL30P1-201ENST00000488676 339 ntBASIC3.28□□□□□ -1.88
PCDHGA9Q9Y5G4 AC006445.1-201ENST00000491925 405 ntBASIC3.28□□□□□ -1.88
PCDHGA9Q9Y5G4 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.28□□□□□ -1.88
PCDHGA9Q9Y5G4 SNORA70.18-201ENST00000516696 98 ntBASIC3.28□□□□□ -1.88
PCDHGA9Q9Y5G4 RNU6-1198P-201ENST00000516904 67 ntBASIC3.28□□□□□ -1.88
PCDHGA9Q9Y5G4 RNU6-699P-201ENST00000517081 110 ntBASIC3.28□□□□□ -1.88
PCDHGA9Q9Y5G4 AC144568.1-201ENST00000520139 137 ntBASIC3.28□□□□□ -1.88
PCDHGA9Q9Y5G4 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDHGA9Q9Y5G4 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.28□□□□□ -1.88
PCDHGA9Q9Y5G4 AC100812.1-201ENST00000607622 580 ntBASIC3.28□□□□□ -1.88
PCDHGA9Q9Y5G4 AL359198.2-201ENST00000611836 194 ntBASIC3.28□□□□□ -1.88
PCDHGA9Q9Y5G4 AL138825.1-201ENST00000618587 192 ntBASIC3.28□□□□□ -1.88
PCDHGA9Q9Y5G4 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PCDHGA9Q9Y5G4 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.28□□□□□ -1.88
PCDHGA9Q9Y5G4 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.89
PCDHGA9Q9Y5G4 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
PCDHGA9Q9Y5G4 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
PCDHGA9Q9Y5G4 Y_RNA.5-201ENST00000362334 102 ntBASIC3.27□□□□□ -1.89
PCDHGA9Q9Y5G4 SNORD115-32-201ENST00000364079 82 ntBASIC3.27□□□□□ -1.89
PCDHGA9Q9Y5G4 AL138885.1-201ENST00000405921 675 ntBASIC3.27□□□□□ -1.89
PCDHGA9Q9Y5G4 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDHGA9Q9Y5G4 MICF-203ENST00000432679 129 ntBASIC3.27□□□□□ -1.89
PCDHGA9Q9Y5G4 AL353997.1-201ENST00000432936 108 ntBASIC3.27□□□□□ -1.89
PCDHGA9Q9Y5G4 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDHGA9Q9Y5G4 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.27□□□□□ -1.89
PCDHGA9Q9Y5G4 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDHGA9Q9Y5G4 snoU13.30-201ENST00000458951 104 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms