Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.62□□□□□ -2.15
KCNIP3Q9Y2W7 SCARNA18-201ENST00000459004 134 ntBASIC1.62□□□□□ -2.15
KCNIP3Q9Y2W7 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.62□□□□□ -2.15
KCNIP3Q9Y2W7 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.62□□□□□ -2.15
KCNIP3Q9Y2W7 AC093259.1-201ENST00000509755 300 ntBASIC1.62□□□□□ -2.15
KCNIP3Q9Y2W7 AC105417.1-201ENST00000514691 285 ntBASIC1.62□□□□□ -2.15
KCNIP3Q9Y2W7 RN7SKP219-201ENST00000516825 296 ntBASIC1.62□□□□□ -2.15
KCNIP3Q9Y2W7 IGKV3-31-201ENST00000523109 329 ntBASIC1.62□□□□□ -2.15
KCNIP3Q9Y2W7 AC022880.1-201ENST00000534017 973 ntBASIC1.62□□□□□ -2.15
KCNIP3Q9Y2W7 AC091805.2-201ENST00000603848 235 ntBASIC1.62□□□□□ -2.15
KCNIP3Q9Y2W7 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.62□□□□□ -2.15
KCNIP3Q9Y2W7 AC073114.1-201ENST00000612027 490 ntBASIC1.62□□□□□ -2.15
KCNIP3Q9Y2W7 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.62□□□□□ -2.15
KCNIP3Q9Y2W7 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.62□□□□□ -2.15
KCNIP3Q9Y2W7 ZNF680P1-201ENST00000436625 1469 ntBASIC1.62□□□□□ -2.15
KCNIP3Q9Y2W7 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.62□□□□□ -2.15
KCNIP3Q9Y2W7 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
KCNIP3Q9Y2W7 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
KCNIP3Q9Y2W7 RNU1-58P-201ENST00000362413 163 ntBASIC1.61□□□□□ -2.15
KCNIP3Q9Y2W7 RNU4-15P-201ENST00000362613 141 ntBASIC1.61□□□□□ -2.15
KCNIP3Q9Y2W7 RNU6-428P-201ENST00000362942 107 ntBASIC1.61□□□□□ -2.15
KCNIP3Q9Y2W7 RNU6-1120P-201ENST00000362988 108 ntBASIC1.61□□□□□ -2.15
KCNIP3Q9Y2W7 Y_RNA.159-201ENST00000363674 87 ntBASIC1.61□□□□□ -2.15
KCNIP3Q9Y2W7 SNORD32B-201ENST00000364460 84 ntBASIC1.61□□□□□ -2.15
KCNIP3Q9Y2W7 RNU6-1141P-201ENST00000364520 107 ntBASIC1.61□□□□□ -2.15
KCNIP3Q9Y2W7 Y_RNA.399-201ENST00000383955 105 ntBASIC1.61□□□□□ -2.15
KCNIP3Q9Y2W7 RNU6-43P-201ENST00000384302 107 ntBASIC1.61□□□□□ -2.15
KCNIP3Q9Y2W7 RNU6-348P-201ENST00000384386 107 ntBASIC1.61□□□□□ -2.15
KCNIP3Q9Y2W7 RNU6-692P-201ENST00000384496 107 ntBASIC1.61□□□□□ -2.15
KCNIP3Q9Y2W7 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
KCNIP3Q9Y2W7 MTATP6P18-201ENST00000417994 673 ntBASIC1.61□□□□□ -2.15
KCNIP3Q9Y2W7 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.61□□□□□ -2.15
KCNIP3Q9Y2W7 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.61□□□□□ -2.15
KCNIP3Q9Y2W7 AL360221.1-201ENST00000445989 335 ntBASIC1.61□□□□□ -2.15
KCNIP3Q9Y2W7 RPL23AP6-201ENST00000446637 472 ntBASIC1.61□□□□□ -2.15
KCNIP3Q9Y2W7 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.61□□□□□ -2.15
KCNIP3Q9Y2W7 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.61□□□□□ -2.15
KCNIP3Q9Y2W7 ARL2BPP4-201ENST00000506854 471 ntBASIC1.61□□□□□ -2.15
KCNIP3Q9Y2W7 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.61□□□□□ -2.15
KCNIP3Q9Y2W7 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.61□□□□□ -2.15
KCNIP3Q9Y2W7 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.61□□□□□ -2.15
KCNIP3Q9Y2W7 AGGF1P4-201ENST00000568249 801 ntBASIC1.61□□□□□ -2.15
KCNIP3Q9Y2W7 DEFB122-202ENST00000569013 197 ntBASIC1.61□□□□□ -2.15
KCNIP3Q9Y2W7 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.61□□□□□ -2.15
KCNIP3Q9Y2W7 MIR5089-201ENST00000580047 84 ntBASIC1.61□□□□□ -2.15
KCNIP3Q9Y2W7 MIR3136-201ENST00000583498 78 ntBASIC1.61□□□□□ -2.15
KCNIP3Q9Y2W7 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.61□□□□□ -2.15
KCNIP3Q9Y2W7 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.61□□□□□ -2.15
KCNIP3Q9Y2W7 AC087752.4-201ENST00000605911 462 ntBASIC1.61□□□□□ -2.15
KCNIP3Q9Y2W7 AC002044.1-201ENST00000606707 158 ntBASIC1.61□□□□□ -2.15
KCNIP3Q9Y2W7 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
KCNIP3Q9Y2W7 AC136475.10-201ENST00000620253 385 ntBASIC1.61□□□□□ -2.15
KCNIP3Q9Y2W7 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.61□□□□□ -2.15
KCNIP3Q9Y2W7 AC006386.2-201ENST00000624491 75 ntBASIC1.61□□□□□ -2.15
KCNIP3Q9Y2W7 AC012005.1-201ENST00000624575 75 ntBASIC1.61□□□□□ -2.15
KCNIP3Q9Y2W7 SNORD98-201ENST00000636377 67 ntBASIC1.61□□□□□ -2.15
KCNIP3Q9Y2W7 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
KCNIP3Q9Y2W7 RNU6-743P-201ENST00000364151 106 ntBASIC1.6□□□□□ -2.15
KCNIP3Q9Y2W7 RNU6-266P-201ENST00000364225 107 ntBASIC1.6□□□□□ -2.15
KCNIP3Q9Y2W7 MIR23B-201ENST00000384832 97 ntBASIC1.6□□□□□ -2.15
KCNIP3Q9Y2W7 MIR597-201ENST00000384968 97 ntBASIC1.6□□□□□ -2.15
KCNIP3Q9Y2W7 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.6□□□□□ -2.15
KCNIP3Q9Y2W7 EIF4EP2-201ENST00000422816 654 ntBASIC1.6□□□□□ -2.15
KCNIP3Q9Y2W7 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.6□□□□□ -2.15
KCNIP3Q9Y2W7 USP9YP29-201ENST00000445112 563 ntBASIC1.6□□□□□ -2.15
KCNIP3Q9Y2W7 BET1P1-201ENST00000482276 359 ntBASIC1.6□□□□□ -2.15
KCNIP3Q9Y2W7 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.6□□□□□ -2.15
KCNIP3Q9Y2W7 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.6□□□□□ -2.15
KCNIP3Q9Y2W7 MTND3P5-201ENST00000512798 333 ntBASIC1.6□□□□□ -2.15
KCNIP3Q9Y2W7 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.6□□□□□ -2.15
KCNIP3Q9Y2W7 Y_RNA.695-201ENST00000516715 107 ntBASIC1.6□□□□□ -2.15
KCNIP3Q9Y2W7 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.6□□□□□ -2.15
KCNIP3Q9Y2W7 AL137161.1-201ENST00000532231 390 ntBASIC1.6□□□□□ -2.15
KCNIP3Q9Y2W7 AC022254.1-201ENST00000567857 235 ntBASIC1.6□□□□□ -2.15
KCNIP3Q9Y2W7 AC024614.2-201ENST00000577584 372 ntBASIC1.6□□□□□ -2.15
KCNIP3Q9Y2W7 MIR4528-201ENST00000577763 90 ntBASIC1.6□□□□□ -2.15
KCNIP3Q9Y2W7 MIR3941-201ENST00000582572 103 ntBASIC1.6□□□□□ -2.15
KCNIP3Q9Y2W7 RSL24D1P11-201ENST00000591045 491 ntBASIC1.6□□□□□ -2.15
KCNIP3Q9Y2W7 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.6□□□□□ -2.15
KCNIP3Q9Y2W7 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.6□□□□□ -2.15
KCNIP3Q9Y2W7 AL158063.1-201ENST00000615349 536 ntBASIC1.6□□□□□ -2.15
KCNIP3Q9Y2W7 AC008147.4-201ENST00000617570 1204 ntBASIC1.6□□□□□ -2.15
KCNIP3Q9Y2W7 AC005609.4-201ENST00000625071 447 ntBASIC1.6□□□□□ -2.15
KCNIP3Q9Y2W7 AC241585.2-209ENST00000638217 143 ntBASIC1.6□□□□□ -2.15
KCNIP3Q9Y2W7 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
KCNIP3Q9Y2W7 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
KCNIP3Q9Y2W7 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
KCNIP3Q9Y2W7 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
KCNIP3Q9Y2W7 RNU6-552P-201ENST00000362869 119 ntBASIC1.59□□□□□ -2.15
KCNIP3Q9Y2W7 RNU4-42P-201ENST00000364738 142 ntBASIC1.59□□□□□ -2.15
KCNIP3Q9Y2W7 RNU6-142P-201ENST00000384019 107 ntBASIC1.59□□□□□ -2.15
KCNIP3Q9Y2W7 SNORD116-8-201ENST00000384365 95 ntBASIC1.59□□□□□ -2.15
KCNIP3Q9Y2W7 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
KCNIP3Q9Y2W7 RNU11-3P-201ENST00000391111 133 ntBASIC1.59□□□□□ -2.15
KCNIP3Q9Y2W7 RNA5SP212-201ENST00000391223 107 ntBASIC1.59□□□□□ -2.15
KCNIP3Q9Y2W7 RNU6-903P-201ENST00000391270 109 ntBASIC1.59□□□□□ -2.15
KCNIP3Q9Y2W7 MIR1294-201ENST00000408503 142 ntBASIC1.59□□□□□ -2.15
KCNIP3Q9Y2W7 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.59□□□□□ -2.15
KCNIP3Q9Y2W7 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.59□□□□□ -2.15
KCNIP3Q9Y2W7 UBE2V1P4-201ENST00000425374 344 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms