Protein–RNA interactions for Protein: Q9UQD0

SCN8A, Sodium channel protein type 8 subunit alpha, humanhuman

Predictions only

Length 1,980 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8AQ9UQD0 RNU6-817P-201ENST00000391083 104 ntBASIC0.72□□□□□ -2.29
SCN8AQ9UQD0 AL603865.2-201ENST00000401679 213 ntBASIC0.72□□□□□ -2.29
SCN8AQ9UQD0 EBAG9P1-201ENST00000418955 543 ntBASIC0.72□□□□□ -2.29
SCN8AQ9UQD0 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC0.72□□□□□ -2.29
SCN8AQ9UQD0 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.72□□□□□ -2.29
SCN8AQ9UQD0 AL135790.2-201ENST00000437701 267 ntBASIC0.72□□□□□ -2.29
SCN8AQ9UQD0 RPL39P28-201ENST00000465655 155 ntBASIC0.72□□□□□ -2.29
SCN8AQ9UQD0 RPL26P26-201ENST00000480251 434 ntBASIC0.72□□□□□ -2.29
SCN8AQ9UQD0 AC021146.2-201ENST00000504736 556 ntBASIC0.72□□□□□ -2.29
SCN8AQ9UQD0 OR8K2P-201ENST00000524645 927 ntBASIC0.72□□□□□ -2.29
SCN8AQ9UQD0 AP003049.1-201ENST00000529418 457 ntBASIC0.72□□□□□ -2.29
SCN8AQ9UQD0 AP003484.1-201ENST00000530974 250 ntBASIC0.72□□□□□ -2.29
SCN8AQ9UQD0 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.72□□□□□ -2.29
SCN8AQ9UQD0 AC090115.3-201ENST00000553218 849 ntBASIC0.72□□□□□ -2.29
SCN8AQ9UQD0 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.72□□□□□ -2.29
SCN8AQ9UQD0 AL353778.1-201ENST00000603149 408 ntBASIC0.72□□□□□ -2.29
SCN8AQ9UQD0 AL354696.1-201ENST00000614652 497 ntBASIC0.72□□□□□ -2.29
SCN8AQ9UQD0 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
SCN8AQ9UQD0 RNU6-37P-201ENST00000362692 107 ntBASIC0.72□□□□□ -2.29
SCN8AQ9UQD0 RNU6-112P-201ENST00000363599 104 ntBASIC0.72□□□□□ -2.29
SCN8AQ9UQD0 RNU5A-8P-201ENST00000364102 114 ntBASIC0.72□□□□□ -2.29
SCN8AQ9UQD0 RNU6-11P-201ENST00000364234 107 ntBASIC0.72□□□□□ -2.29
SCN8AQ9UQD0 SMIM11P1-201ENST00000369586 178 ntBASIC0.72□□□□□ -2.29
SCN8AQ9UQD0 Y_RNA.393-201ENST00000383936 102 ntBASIC0.72□□□□□ -2.29
SCN8AQ9UQD0 Y_RNA.534-201ENST00000384599 112 ntBASIC0.72□□□□□ -2.29
SCN8AQ9UQD0 RNU6-1222P-201ENST00000384615 107 ntBASIC0.72□□□□□ -2.29
SCN8AQ9UQD0 Y_RNA.623-201ENST00000411128 95 ntBASIC0.72□□□□□ -2.29
SCN8AQ9UQD0 AC013410.2-201ENST00000422627 201 ntBASIC0.72□□□□□ -2.29
SCN8AQ9UQD0 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.72□□□□□ -2.29
SCN8AQ9UQD0 AC245047.4-201ENST00000433189 144 ntBASIC0.72□□□□□ -2.29
SCN8AQ9UQD0 MTND4P15-201ENST00000437913 1033 ntBASIC0.72□□□□□ -2.29
SCN8AQ9UQD0 GTF2IP13-201ENST00000438487 386 ntBASIC0.72□□□□□ -2.29
SCN8AQ9UQD0 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.72□□□□□ -2.29
SCN8AQ9UQD0 MTND2P4-201ENST00000445034 1004 ntBASIC0.72□□□□□ -2.29
SCN8AQ9UQD0 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.72□□□□□ -2.29
SCN8AQ9UQD0 snoU13.9-201ENST00000458927 103 ntBASIC0.72□□□□□ -2.29
SCN8AQ9UQD0 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC0.72□□□□□ -2.29
SCN8AQ9UQD0 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
SCN8AQ9UQD0 AC009712.1-201ENST00000564938 316 ntBASIC0.72□□□□□ -2.29
SCN8AQ9UQD0 MZT1P2-201ENST00000604387 248 ntBASIC0.72□□□□□ -2.29
SCN8AQ9UQD0 AL365434.2-201ENST00000607979 234 ntBASIC0.72□□□□□ -2.29
SCN8AQ9UQD0 AC124016.2-201ENST00000610058 665 ntBASIC0.72□□□□□ -2.29
SCN8AQ9UQD0 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.72□□□□□ -2.29
SCN8AQ9UQD0 AC099654.5-201ENST00000636479 350 ntBASIC0.72□□□□□ -2.29
SCN8AQ9UQD0 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
SCN8AQ9UQD0 MIR412-201ENST00000362142 91 ntBASIC0.71□□□□□ -2.3
SCN8AQ9UQD0 RNU6-939P-201ENST00000384634 107 ntBASIC0.71□□□□□ -2.3
SCN8AQ9UQD0 MIR194-1-201ENST00000384892 85 ntBASIC0.71□□□□□ -2.3
SCN8AQ9UQD0 SNORA48.1-201ENST00000390879 135 ntBASIC0.71□□□□□ -2.3
SCN8AQ9UQD0 AC016831.2-201ENST00000417179 352 ntBASIC0.71□□□□□ -2.3
SCN8AQ9UQD0 MTND4P3-201ENST00000417829 541 ntBASIC0.71□□□□□ -2.3
SCN8AQ9UQD0 RPL21P111-201ENST00000418453 477 ntBASIC0.71□□□□□ -2.3
SCN8AQ9UQD0 AL365338.1-201ENST00000422282 858 ntBASIC0.71□□□□□ -2.3
SCN8AQ9UQD0 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.71□□□□□ -2.3
SCN8AQ9UQD0 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.71□□□□□ -2.3
SCN8AQ9UQD0 AC093899.1-201ENST00000457984 376 ntBASIC0.71□□□□□ -2.3
SCN8AQ9UQD0 RNU6-1132P-201ENST00000459214 107 ntBASIC0.71□□□□□ -2.3
SCN8AQ9UQD0 MED28P2-201ENST00000475771 317 ntBASIC0.71□□□□□ -2.3
SCN8AQ9UQD0 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.71□□□□□ -2.3
SCN8AQ9UQD0 AL138889.2-201ENST00000603883 242 ntBASIC0.71□□□□□ -2.3
SCN8AQ9UQD0 MIR15A-201ENST00000607334 83 ntBASIC0.71□□□□□ -2.3
SCN8AQ9UQD0 MIR6513-201ENST00000621188 64 ntBASIC0.71□□□□□ -2.3
SCN8AQ9UQD0 AP000943.4-201ENST00000622912 357 ntBASIC0.71□□□□□ -2.3
SCN8AQ9UQD0 AC009033.1-201ENST00000624279 431 ntBASIC0.71□□□□□ -2.3
SCN8AQ9UQD0 RNU6-777P-201ENST00000364265 104 ntBASIC0.7□□□□□ -2.3
SCN8AQ9UQD0 RNU6-1019P-201ENST00000364424 107 ntBASIC0.7□□□□□ -2.3
SCN8AQ9UQD0 MIR146A-201ENST00000385201 99 ntBASIC0.7□□□□□ -2.3
SCN8AQ9UQD0 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.7□□□□□ -2.3
SCN8AQ9UQD0 AC114982.1-201ENST00000469402 321 ntBASIC0.7□□□□□ -2.3
SCN8AQ9UQD0 AC099513.1-201ENST00000490423 301 ntBASIC0.7□□□□□ -2.3
SCN8AQ9UQD0 HMGN1P13-201ENST00000505795 138 ntBASIC0.7□□□□□ -2.3
SCN8AQ9UQD0 RNU6-64P-201ENST00000517119 105 ntBASIC0.7□□□□□ -2.3
SCN8AQ9UQD0 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.7□□□□□ -2.3
SCN8AQ9UQD0 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.7□□□□□ -2.3
SCN8AQ9UQD0 AP003122.4-201ENST00000530980 758 ntBASIC0.7□□□□□ -2.3
SCN8AQ9UQD0 AP000654.2-201ENST00000605633 586 ntBASIC0.7□□□□□ -2.3
SCN8AQ9UQD0 AC243829.6-201ENST00000612652 106 ntBASIC0.7□□□□□ -2.3
SCN8AQ9UQD0 AC095038.3-201ENST00000634439 195 ntBASIC0.7□□□□□ -2.3
SCN8AQ9UQD0 MTND5P42-201ENST00000637720 498 ntBASIC0.7□□□□□ -2.3
SCN8AQ9UQD0 AC099654.8-201ENST00000637757 681 ntBASIC0.7□□□□□ -2.3
SCN8AQ9UQD0 AL391516.1-201ENST00000554380 2449 ntBASIC0.7□□□□□ -2.3
SCN8AQ9UQD0 MIR26B-201ENST00000362251 77 ntBASIC0.7□□□□□ -2.3
SCN8AQ9UQD0 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.7□□□□□ -2.3
SCN8AQ9UQD0 SNORA75B-201ENST00000384053 137 ntBASIC0.7□□□□□ -2.3
SCN8AQ9UQD0 SNORA29-201ENST00000384183 140 ntBASIC0.7□□□□□ -2.3
SCN8AQ9UQD0 AL133475.1-201ENST00000404414 305 ntBASIC0.7□□□□□ -2.3
SCN8AQ9UQD0 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.7□□□□□ -2.3
SCN8AQ9UQD0 RPL31P3-201ENST00000458430 332 ntBASIC0.7□□□□□ -2.3
SCN8AQ9UQD0 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.7□□□□□ -2.3
SCN8AQ9UQD0 RNU6-150P-201ENST00000516237 95 ntBASIC0.7□□□□□ -2.3
SCN8AQ9UQD0 AP003355.1-201ENST00000518956 587 ntBASIC0.7□□□□□ -2.3
SCN8AQ9UQD0 DPPA3P3-201ENST00000603842 430 ntBASIC0.7□□□□□ -2.3
SCN8AQ9UQD0 AC008133.2-201ENST00000624540 351 ntBASIC0.7□□□□□ -2.3
SCN8AQ9UQD0 AL136313.1-201ENST00000624804 202 ntBASIC0.7□□□□□ -2.3
SCN8AQ9UQD0 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.69□□□□□ -2.3
SCN8AQ9UQD0 RNU6-26P-201ENST00000383985 107 ntBASIC0.69□□□□□ -2.3
SCN8AQ9UQD0 RNU6-1274P-201ENST00000384557 107 ntBASIC0.69□□□□□ -2.3
SCN8AQ9UQD0 MIR216A-201ENST00000385063 110 ntBASIC0.69□□□□□ -2.3
SCN8AQ9UQD0 BTF3L4P1-201ENST00000413813 468 ntBASIC0.69□□□□□ -2.3
SCN8AQ9UQD0 AC132479.1-201ENST00000449160 144 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 557.5 ms