Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 RNU1-41P-201ENST00000516161 162 ntBASIC4.21□□□□□ -1.74
CDK11AQ9UQ88 SCARNA17.1-201ENST00000516211 143 ntBASIC4.21□□□□□ -1.74
CDK11AQ9UQ88 SCARNA17.2-201ENST00000516334 143 ntBASIC4.21□□□□□ -1.74
CDK11AQ9UQ88 RNA5SP282-201ENST00000516355 108 ntBASIC4.21□□□□□ -1.74
CDK11AQ9UQ88 RNU1-48P-201ENST00000516400 162 ntBASIC4.21□□□□□ -1.74
CDK11AQ9UQ88 SNORA31.18-201ENST00000517043 134 ntBASIC4.21□□□□□ -1.74
CDK11AQ9UQ88 AC109479.2-201ENST00000517842 174 ntBASIC4.21□□□□□ -1.74
CDK11AQ9UQ88 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.21□□□□□ -1.74
CDK11AQ9UQ88 AP005639.2-201ENST00000527592 928 ntBASIC4.21□□□□□ -1.74
CDK11AQ9UQ88 AC008121.1-201ENST00000603244 268 ntBASIC4.21□□□□□ -1.74
CDK11AQ9UQ88 SCARNA17.4-201ENST00000614296 143 ntBASIC4.21□□□□□ -1.74
CDK11AQ9UQ88 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.21□□□□□ -1.74
CDK11AQ9UQ88 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDK11AQ9UQ88 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDK11AQ9UQ88 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC4.2□□□□□ -1.74
CDK11AQ9UQ88 RNU6-37P-201ENST00000362692 107 ntBASIC4.2□□□□□ -1.74
CDK11AQ9UQ88 RNU6-11P-201ENST00000364234 107 ntBASIC4.2□□□□□ -1.74
CDK11AQ9UQ88 RNU6-25P-201ENST00000383873 107 ntBASIC4.2□□□□□ -1.74
CDK11AQ9UQ88 RNU6-1-201ENST00000383898 107 ntBASIC4.2□□□□□ -1.74
CDK11AQ9UQ88 RNU6-1083P-201ENST00000384022 107 ntBASIC4.2□□□□□ -1.74
CDK11AQ9UQ88 RNU6-48P-201ENST00000384161 107 ntBASIC4.2□□□□□ -1.74
CDK11AQ9UQ88 RNU6-36P-201ENST00000384172 107 ntBASIC4.2□□□□□ -1.74
CDK11AQ9UQ88 RNU6-4P-201ENST00000384205 107 ntBASIC4.2□□□□□ -1.74
CDK11AQ9UQ88 SNORA70B-201ENST00000384210 135 ntBASIC4.2□□□□□ -1.74
CDK11AQ9UQ88 RNU6-5P-201ENST00000384238 107 ntBASIC4.2□□□□□ -1.74
CDK11AQ9UQ88 RNU6-3P-201ENST00000384314 107 ntBASIC4.2□□□□□ -1.74
CDK11AQ9UQ88 RNU6-16P-201ENST00000384385 107 ntBASIC4.2□□□□□ -1.74
CDK11AQ9UQ88 RNU6-15P-201ENST00000384534 107 ntBASIC4.2□□□□□ -1.74
CDK11AQ9UQ88 RNU6-2-201ENST00000384627 107 ntBASIC4.2□□□□□ -1.74
CDK11AQ9UQ88 RNU6-29P-201ENST00000384637 107 ntBASIC4.2□□□□□ -1.74
CDK11AQ9UQ88 RNU6-9-201ENST00000384776 107 ntBASIC4.2□□□□□ -1.74
CDK11AQ9UQ88 RNU6-33P-201ENST00000384793 107 ntBASIC4.2□□□□□ -1.74
CDK11AQ9UQ88 AL356057.3-201ENST00000402607 340 ntBASIC4.2□□□□□ -1.74
CDK11AQ9UQ88 MIR548F5-201ENST00000408421 86 ntBASIC4.2□□□□□ -1.74
CDK11AQ9UQ88 U3.37-201ENST00000408528 213 ntBASIC4.2□□□□□ -1.74
CDK11AQ9UQ88 RNU6-293P-201ENST00000411259 106 ntBASIC4.2□□□□□ -1.74
CDK11AQ9UQ88 RPL37P10-201ENST00000412884 288 ntBASIC4.2□□□□□ -1.74
CDK11AQ9UQ88 MTND4P28-201ENST00000426217 387 ntBASIC4.2□□□□□ -1.74
CDK11AQ9UQ88 HMGN2P10-201ENST00000448085 265 ntBASIC4.2□□□□□ -1.74
CDK11AQ9UQ88 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.2□□□□□ -1.74
CDK11AQ9UQ88 RPS27P27-201ENST00000498779 255 ntBASIC4.2□□□□□ -1.74
CDK11AQ9UQ88 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.2□□□□□ -1.74
CDK11AQ9UQ88 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC4.2□□□□□ -1.74
CDK11AQ9UQ88 RNU6-6P-201ENST00000606623 107 ntBASIC4.2□□□□□ -1.74
CDK11AQ9UQ88 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CDK11AQ9UQ88 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDK11AQ9UQ88 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDK11AQ9UQ88 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CDK11AQ9UQ88 RNU6-1329P-201ENST00000365664 107 ntBASIC4.19□□□□□ -1.74
CDK11AQ9UQ88 Y_RNA.387-201ENST00000383918 102 ntBASIC4.19□□□□□ -1.74
CDK11AQ9UQ88 RNU6-72P-201ENST00000384285 79 ntBASIC4.19□□□□□ -1.74
CDK11AQ9UQ88 SNORA26.7-201ENST00000391288 122 ntBASIC4.19□□□□□ -1.74
CDK11AQ9UQ88 AL645568.3-201ENST00000433683 316 ntBASIC4.19□□□□□ -1.74
CDK11AQ9UQ88 AC112220.1-201ENST00000434628 355 ntBASIC4.19□□□□□ -1.74
CDK11AQ9UQ88 HIGD1AP2-201ENST00000446367 280 ntBASIC4.19□□□□□ -1.74
CDK11AQ9UQ88 MTND1P17-201ENST00000448961 204 ntBASIC4.19□□□□□ -1.74
CDK11AQ9UQ88 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.19□□□□□ -1.74
CDK11AQ9UQ88 AC130509.1-201ENST00000464158 433 ntBASIC4.19□□□□□ -1.74
CDK11AQ9UQ88 AC090525.1-201ENST00000479116 478 ntBASIC4.19□□□□□ -1.74
CDK11AQ9UQ88 MTND5P5-201ENST00000503764 376 ntBASIC4.19□□□□□ -1.74
CDK11AQ9UQ88 RN7SKP24-201ENST00000515888 284 ntBASIC4.19□□□□□ -1.74
CDK11AQ9UQ88 RNU6-277P-201ENST00000516272 106 ntBASIC4.19□□□□□ -1.74
CDK11AQ9UQ88 RPPH1-2P-201ENST00000516688 293 ntBASIC4.19□□□□□ -1.74
CDK11AQ9UQ88 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.19□□□□□ -1.74
CDK11AQ9UQ88 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.19□□□□□ -1.74
CDK11AQ9UQ88 AP005597.4-201ENST00000526762 229 ntBASIC4.19□□□□□ -1.74
CDK11AQ9UQ88 AC007536.1-201ENST00000533382 349 ntBASIC4.19□□□□□ -1.74
CDK11AQ9UQ88 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.19□□□□□ -1.74
CDK11AQ9UQ88 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.19□□□□□ -1.74
CDK11AQ9UQ88 AL355375.2-201ENST00000574825 175 ntBASIC4.19□□□□□ -1.74
CDK11AQ9UQ88 AC090616.3-201ENST00000582184 217 ntBASIC4.19□□□□□ -1.74
CDK11AQ9UQ88 MIR4795-201ENST00000584182 89 ntBASIC4.19□□□□□ -1.74
CDK11AQ9UQ88 AL391813.1-201ENST00000603098 260 ntBASIC4.19□□□□□ -1.74
CDK11AQ9UQ88 Y_RNA.339-201ENST00000365325 102 ntBASIC4.18□□□□□ -1.74
CDK11AQ9UQ88 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.18□□□□□ -1.74
CDK11AQ9UQ88 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.18□□□□□ -1.74
CDK11AQ9UQ88 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.18□□□□□ -1.74
CDK11AQ9UQ88 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.18□□□□□ -1.74
CDK11AQ9UQ88 AC003982.1-202ENST00000469928 248 ntBASIC4.18□□□□□ -1.74
CDK11AQ9UQ88 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC4.18□□□□□ -1.74
CDK11AQ9UQ88 AP004607.1-201ENST00000524456 203 ntBASIC4.18□□□□□ -1.74
CDK11AQ9UQ88 AC021739.1-201ENST00000559631 174 ntBASIC4.18□□□□□ -1.74
CDK11AQ9UQ88 AC123912.5-201ENST00000605470 343 ntBASIC4.18□□□□□ -1.74
CDK11AQ9UQ88 MIR6134-201ENST00000617606 109 ntBASIC4.18□□□□□ -1.74
CDK11AQ9UQ88 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
CDK11AQ9UQ88 AC010329.5-201ENST00000623497 2174 ntBASIC4.18□□□□□ -1.74
CDK11AQ9UQ88 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC4.18□□□□□ -1.74
CDK11AQ9UQ88 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CDK11AQ9UQ88 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.17□□□□□ -1.74
CDK11AQ9UQ88 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.17□□□□□ -1.74
CDK11AQ9UQ88 RNU5E-7P-201ENST00000365290 117 ntBASIC4.17□□□□□ -1.74
CDK11AQ9UQ88 RNU6-898P-201ENST00000365627 104 ntBASIC4.17□□□□□ -1.74
CDK11AQ9UQ88 U8.9-201ENST00000365667 134 ntBASIC4.17□□□□□ -1.74
CDK11AQ9UQ88 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CDK11AQ9UQ88 Z98749.2-208ENST00000381646 500 ntBASIC4.17□□□□□ -1.74
CDK11AQ9UQ88 RNU1-109P-201ENST00000383960 147 ntBASIC4.17□□□□□ -1.74
CDK11AQ9UQ88 Y_RNA.474-201ENST00000384341 102 ntBASIC4.17□□□□□ -1.74
CDK11AQ9UQ88 RN7SKP158-201ENST00000410453 326 ntBASIC4.17□□□□□ -1.74
CDK11AQ9UQ88 SNORD56-201ENST00000413522 71 ntBASIC4.17□□□□□ -1.74
CDK11AQ9UQ88 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms