Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 RPS29P19-201ENST00000479709 171 ntBASIC4.98□□□□□ -1.61
ZC3H4Q9UPT8 RN7SL293P-201ENST00000481765 281 ntBASIC4.98□□□□□ -1.61
ZC3H4Q9UPT8 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC4.98□□□□□ -1.61
ZC3H4Q9UPT8 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.98□□□□□ -1.61
ZC3H4Q9UPT8 RNA5SP446-201ENST00000515955 82 ntBASIC4.98□□□□□ -1.61
ZC3H4Q9UPT8 MIR5692C2-201ENST00000577959 77 ntBASIC4.98□□□□□ -1.61
ZC3H4Q9UPT8 AC015813.4-201ENST00000610469 179 ntBASIC4.98□□□□□ -1.61
ZC3H4Q9UPT8 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4.98□□□□□ -1.61
ZC3H4Q9UPT8 AL359198.2-201ENST00000611836 194 ntBASIC4.98□□□□□ -1.61
ZC3H4Q9UPT8 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
ZC3H4Q9UPT8 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.98□□□□□ -1.61
ZC3H4Q9UPT8 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
ZC3H4Q9UPT8 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
ZC3H4Q9UPT8 AC118273.1-201ENST00000525324 3006 ntBASIC4.98□□□□□ -1.61
ZC3H4Q9UPT8 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.98□□□□□ -1.61
ZC3H4Q9UPT8 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.98□□□□□ -1.61
ZC3H4Q9UPT8 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
ZC3H4Q9UPT8 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
ZC3H4Q9UPT8 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
ZC3H4Q9UPT8 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
ZC3H4Q9UPT8 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
ZC3H4Q9UPT8 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
ZC3H4Q9UPT8 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.98□□□□□ -1.61
ZC3H4Q9UPT8 AF127577.6-201ENST00000623352 2191 ntBASIC4.98□□□□□ -1.61
ZC3H4Q9UPT8 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
ZC3H4Q9UPT8 RNA5SP151-201ENST00000365632 117 ntBASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 RNU6-1197P-201ENST00000391183 107 ntBASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 RNU2-2P-201ENST00000410396 191 ntBASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 AC074117.2-201ENST00000417130 397 ntBASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 AL162725.1-201ENST00000435405 301 ntBASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 AC125238.1-201ENST00000448842 249 ntBASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 AC097462.2-201ENST00000504623 481 ntBASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 AC069240.1-201ENST00000548774 375 ntBASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 MIR5571-201ENST00000577998 113 ntBASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 RNU2-4P-201ENST00000606190 192 ntBASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 U2.15-201ENST00000611544 191 ntBASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 U2.16-201ENST00000613119 191 ntBASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 U2.12-201ENST00000613778 191 ntBASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 U2.9-201ENST00000615427 191 ntBASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 U2.11-201ENST00000616345 191 ntBASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 U2.2-201ENST00000616535 191 ntBASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 U2.3-201ENST00000617785 191 ntBASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 U2.19-201ENST00000618602 191 ntBASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 RNU2-1-201ENST00000618664 191 ntBASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 U2.6-201ENST00000619225 191 ntBASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 U2.5-201ENST00000619465 191 ntBASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 U2.10-201ENST00000620268 191 ntBASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 SCARNA15.3-201ENST00000626315 122 ntBASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 SCARNA4.1-201ENST00000628597 123 ntBASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 RNU6-653P-201ENST00000363074 106 ntBASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 RNU1-100P-201ENST00000365255 165 ntBASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 Y_RNA.357-201ENST00000365487 109 ntBASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 Y_RNA.400-201ENST00000383963 111 ntBASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 RNU1-73P-201ENST00000383971 164 ntBASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 SNORA22C-201ENST00000384614 134 ntBASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 RNVU1-14-201ENST00000384770 164 ntBASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 Y_RNA.580-201ENST00000391004 95 ntBASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 RPL26P27-201ENST00000414397 437 ntBASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 RPS15AP5-201ENST00000436276 388 ntBASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 AC007969.2-201ENST00000441891 191 ntBASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 HMGN2P7-201ENST00000456186 273 ntBASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 MTND6P33-201ENST00000571794 183 ntBASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 MIR5684-201ENST00000585074 65 ntBASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 FTX_3.1-201ENST00000610451 147 ntBASIC4.97□□□□□ -1.61
ZC3H4Q9UPT8 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
ZC3H4Q9UPT8 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.96□□□□□ -1.61
ZC3H4Q9UPT8 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
ZC3H4Q9UPT8 OTUD4P1-201ENST00000237841 3067 ntBASIC4.96□□□□□ -1.61
ZC3H4Q9UPT8 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
ZC3H4Q9UPT8 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
ZC3H4Q9UPT8 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
ZC3H4Q9UPT8 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
ZC3H4Q9UPT8 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
ZC3H4Q9UPT8 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
ZC3H4Q9UPT8 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.96□□□□□ -1.62
ZC3H4Q9UPT8 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.96□□□□□ -1.62
ZC3H4Q9UPT8 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.96□□□□□ -1.62
ZC3H4Q9UPT8 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
ZC3H4Q9UPT8 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC4.96□□□□□ -1.62
ZC3H4Q9UPT8 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
ZC3H4Q9UPT8 RNU6-1141P-201ENST00000364520 107 ntBASIC4.96□□□□□ -1.62
ZC3H4Q9UPT8 SNORD6-201ENST00000365444 73 ntBASIC4.96□□□□□ -1.62
ZC3H4Q9UPT8 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.96□□□□□ -1.62
ZC3H4Q9UPT8 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.96□□□□□ -1.62
ZC3H4Q9UPT8 AC092047.1-201ENST00000424997 240 ntBASIC4.96□□□□□ -1.62
ZC3H4Q9UPT8 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.96□□□□□ -1.62
ZC3H4Q9UPT8 AC010469.1-201ENST00000463864 576 ntBASIC4.96□□□□□ -1.62
ZC3H4Q9UPT8 RNU6-191P-201ENST00000516295 94 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms