Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
DDX41Q9UJV9 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
DDX41Q9UJV9 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
DDX41Q9UJV9 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.09□□□□□ -1.75
DDX41Q9UJV9 RNU4-50P-201ENST00000364361 141 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 U3.13-201ENST00000364804 214 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 SNORA63.7-201ENST00000365579 123 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 RNVU1-14-201ENST00000384770 164 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 MIR491-201ENST00000384877 84 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 MIR591-201ENST00000385290 95 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 EI24P2-201ENST00000397776 1076 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
DDX41Q9UJV9 MIR548F4-201ENST00000408515 105 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 HMGB3P2-201ENST00000411913 584 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 AL358453.1-201ENST00000422522 250 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 AC078809.1-201ENST00000427601 140 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 GPM6BP3-201ENST00000442797 145 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 AC009296.1-201ENST00000443146 155 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.09□□□□□ -1.75
DDX41Q9UJV9 CHEK2P4-201ENST00000450340 246 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 MTATP8P1-201ENST00000467115 207 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 AP001025.1-201ENST00000486139 332 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 RPL22P13-201ENST00000493291 347 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 PHBP14-201ENST00000512887 367 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 MTCO2P24-201ENST00000515611 426 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 RNU5B-3P-201ENST00000516601 115 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 RN7SKP272-201ENST00000516988 232 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 RNU6-711P-201ENST00000517255 106 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
DDX41Q9UJV9 AC090897.2-201ENST00000581715 130 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 AL355877.2-201ENST00000603670 358 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 AC096772.1-201ENST00000609146 564 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 RMST_6.1-201ENST00000611980 203 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
DDX41Q9UJV9 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
DDX41Q9UJV9 AC091152.2-201ENST00000591628 2569 ntBASIC4.08□□□□□ -1.76
DDX41Q9UJV9 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.08□□□□□ -1.76
DDX41Q9UJV9 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.08□□□□□ -1.76
DDX41Q9UJV9 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
DDX41Q9UJV9 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.08□□□□□ -1.76
DDX41Q9UJV9 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
DDX41Q9UJV9 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
DDX41Q9UJV9 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
DDX41Q9UJV9 AC002543.1-201ENST00000299783 1954 ntBASIC4.08□□□□□ -1.76
DDX41Q9UJV9 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.08□□□□□ -1.76
DDX41Q9UJV9 MIR1252-201ENST00000408861 65 ntBASIC4.08□□□□□ -1.76
DDX41Q9UJV9 RN7SKP61-201ENST00000410642 295 ntBASIC4.08□□□□□ -1.76
DDX41Q9UJV9 RPL21P40-201ENST00000428586 483 ntBASIC4.08□□□□□ -1.76
DDX41Q9UJV9 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.08□□□□□ -1.76
DDX41Q9UJV9 SNORA74D-201ENST00000516404 141 ntBASIC4.08□□□□□ -1.76
DDX41Q9UJV9 MIR2355-201ENST00000517199 87 ntBASIC4.08□□□□□ -1.76
DDX41Q9UJV9 AC115990.1-201ENST00000526957 301 ntBASIC4.08□□□□□ -1.76
DDX41Q9UJV9 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.08□□□□□ -1.76
DDX41Q9UJV9 RPL23AP88-201ENST00000605759 454 ntBASIC4.08□□□□□ -1.76
DDX41Q9UJV9 AC091903.1-201ENST00000624322 454 ntBASIC4.08□□□□□ -1.76
DDX41Q9UJV9 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
DDX41Q9UJV9 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
DDX41Q9UJV9 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
DDX41Q9UJV9 AL353746.1-201ENST00000566293 6881 ntBASIC4.07□□□□□ -1.76
DDX41Q9UJV9 AC092268.1-201ENST00000342691 405 ntBASIC4.07□□□□□ -1.76
DDX41Q9UJV9 RNU6-622P-201ENST00000384272 103 ntBASIC4.07□□□□□ -1.76
DDX41Q9UJV9 SNORA51.11-201ENST00000384442 131 ntBASIC4.07□□□□□ -1.76
DDX41Q9UJV9 RNU6-750P-201ENST00000390946 107 ntBASIC4.07□□□□□ -1.76
DDX41Q9UJV9 RNA5SP293-201ENST00000410527 113 ntBASIC4.07□□□□□ -1.76
DDX41Q9UJV9 AC138623.1-201ENST00000418060 216 ntBASIC4.07□□□□□ -1.76
DDX41Q9UJV9 MTCYBP9-201ENST00000431021 303 ntBASIC4.07□□□□□ -1.76
DDX41Q9UJV9 RN7SL442P-201ENST00000473804 320 ntBASIC4.07□□□□□ -1.76
DDX41Q9UJV9 RPL30P12-201ENST00000474666 353 ntBASIC4.07□□□□□ -1.76
DDX41Q9UJV9 RNU6-635P-201ENST00000516651 102 ntBASIC4.07□□□□□ -1.76
DDX41Q9UJV9 SNORA70.24-201ENST00000517233 118 ntBASIC4.07□□□□□ -1.76
DDX41Q9UJV9 TGIF1P1-201ENST00000558095 802 ntBASIC4.07□□□□□ -1.76
DDX41Q9UJV9 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.07□□□□□ -1.76
DDX41Q9UJV9 AL021879.1-201ENST00000611756 288 ntBASIC4.07□□□□□ -1.76
DDX41Q9UJV9 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
DDX41Q9UJV9 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
DDX41Q9UJV9 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
DDX41Q9UJV9 Y_RNA.153-201ENST00000363615 91 ntBASIC4.06□□□□□ -1.76
DDX41Q9UJV9 SNORD115-32-201ENST00000364079 82 ntBASIC4.06□□□□□ -1.76
DDX41Q9UJV9 Y_RNA.358-201ENST00000365491 99 ntBASIC4.06□□□□□ -1.76
DDX41Q9UJV9 SNORA29-201ENST00000384183 140 ntBASIC4.06□□□□□ -1.76
DDX41Q9UJV9 Y_RNA.551-201ENST00000384661 102 ntBASIC4.06□□□□□ -1.76
DDX41Q9UJV9 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
DDX41Q9UJV9 DBIP2-201ENST00000419076 262 ntBASIC4.06□□□□□ -1.76
DDX41Q9UJV9 BX679664.1-201ENST00000434429 253 ntBASIC4.06□□□□□ -1.76
DDX41Q9UJV9 NDUFB1P1-201ENST00000435191 180 ntBASIC4.06□□□□□ -1.76
DDX41Q9UJV9 AC244670.1-201ENST00000436879 112 ntBASIC4.06□□□□□ -1.76
DDX41Q9UJV9 U8.20-201ENST00000459445 131 ntBASIC4.06□□□□□ -1.76
DDX41Q9UJV9 RPS4XP22-201ENST00000480755 780 ntBASIC4.06□□□□□ -1.76
DDX41Q9UJV9 RPL30P1-201ENST00000488676 339 ntBASIC4.06□□□□□ -1.76
DDX41Q9UJV9 GZMAP1-201ENST00000503054 631 ntBASIC4.06□□□□□ -1.76
DDX41Q9UJV9 AC091874.1-201ENST00000511402 339 ntBASIC4.06□□□□□ -1.76
DDX41Q9UJV9 Y_RNA.715-201ENST00000517082 110 ntBASIC4.06□□□□□ -1.76
DDX41Q9UJV9 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.06□□□□□ -1.76
DDX41Q9UJV9 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.06□□□□□ -1.76
DDX41Q9UJV9 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.06□□□□□ -1.76
DDX41Q9UJV9 AL390123.1-201ENST00000603216 237 ntBASIC4.06□□□□□ -1.76
DDX41Q9UJV9 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.06□□□□□ -1.76
DDX41Q9UJV9 AL513302.2-201ENST00000562313 1842 ntBASIC4.06□□□□□ -1.76
DDX41Q9UJV9 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.06□□□□□ -1.76
DDX41Q9UJV9 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms