Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
DDX41Q9UJV9 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
DDX41Q9UJV9 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
DDX41Q9UJV9 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.09□□□□□ -1.75
DDX41Q9UJV9 RNU4-50P-201ENST00000364361 141 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 U3.13-201ENST00000364804 214 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 SNORA63.7-201ENST00000365579 123 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 RNVU1-14-201ENST00000384770 164 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 MIR491-201ENST00000384877 84 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 MIR591-201ENST00000385290 95 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 EI24P2-201ENST00000397776 1076 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
DDX41Q9UJV9 MIR548F4-201ENST00000408515 105 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 HMGB3P2-201ENST00000411913 584 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 AL358453.1-201ENST00000422522 250 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 AC078809.1-201ENST00000427601 140 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 GPM6BP3-201ENST00000442797 145 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 AC009296.1-201ENST00000443146 155 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.09□□□□□ -1.75
DDX41Q9UJV9 CHEK2P4-201ENST00000450340 246 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 MTATP8P1-201ENST00000467115 207 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 AP001025.1-201ENST00000486139 332 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 RPL22P13-201ENST00000493291 347 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 PHBP14-201ENST00000512887 367 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 MTCO2P24-201ENST00000515611 426 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 RNU5B-3P-201ENST00000516601 115 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 RN7SKP272-201ENST00000516988 232 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 RNU6-711P-201ENST00000517255 106 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
DDX41Q9UJV9 AC090897.2-201ENST00000581715 130 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 AL355877.2-201ENST00000603670 358 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 AC096772.1-201ENST00000609146 564 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 RMST_6.1-201ENST00000611980 203 ntBASIC4.09□□□□□ -1.75
DDX41Q9UJV9 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
DDX41Q9UJV9 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
DDX41Q9UJV9 AC091152.2-201ENST00000591628 2569 ntBASIC4.08□□□□□ -1.76
DDX41Q9UJV9 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.08□□□□□ -1.76
DDX41Q9UJV9 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.08□□□□□ -1.76
DDX41Q9UJV9 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
DDX41Q9UJV9 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.08□□□□□ -1.76
DDX41Q9UJV9 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
DDX41Q9UJV9 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
DDX41Q9UJV9 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
DDX41Q9UJV9 AC002543.1-201ENST00000299783 1954 ntBASIC4.08□□□□□ -1.76
DDX41Q9UJV9 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.08□□□□□ -1.76
DDX41Q9UJV9 MIR1252-201ENST00000408861 65 ntBASIC4.08□□□□□ -1.76
DDX41Q9UJV9 RN7SKP61-201ENST00000410642 295 ntBASIC4.08□□□□□ -1.76
DDX41Q9UJV9 RPL21P40-201ENST00000428586 483 ntBASIC4.08□□□□□ -1.76
DDX41Q9UJV9 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.08□□□□□ -1.76
DDX41Q9UJV9 SNORA74D-201ENST00000516404 141 ntBASIC4.08□□□□□ -1.76
DDX41Q9UJV9 MIR2355-201ENST00000517199 87 ntBASIC4.08□□□□□ -1.76
DDX41Q9UJV9 AC115990.1-201ENST00000526957 301 ntBASIC4.08□□□□□ -1.76
DDX41Q9UJV9 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.08□□□□□ -1.76
DDX41Q9UJV9 RPL23AP88-201ENST00000605759 454 ntBASIC4.08□□□□□ -1.76
DDX41Q9UJV9 AC091903.1-201ENST00000624322 454 ntBASIC4.08□□□□□ -1.76
DDX41Q9UJV9 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
DDX41Q9UJV9 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
DDX41Q9UJV9 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
DDX41Q9UJV9 AL353746.1-201ENST00000566293 6881 ntBASIC4.07□□□□□ -1.76
DDX41Q9UJV9 AC092268.1-201ENST00000342691 405 ntBASIC4.07□□□□□ -1.76
DDX41Q9UJV9 RNU6-622P-201ENST00000384272 103 ntBASIC4.07□□□□□ -1.76
DDX41Q9UJV9 SNORA51.11-201ENST00000384442 131 ntBASIC4.07□□□□□ -1.76
DDX41Q9UJV9 RNU6-750P-201ENST00000390946 107 ntBASIC4.07□□□□□ -1.76
DDX41Q9UJV9 RNA5SP293-201ENST00000410527 113 ntBASIC4.07□□□□□ -1.76
DDX41Q9UJV9 AC138623.1-201ENST00000418060 216 ntBASIC4.07□□□□□ -1.76
DDX41Q9UJV9 MTCYBP9-201ENST00000431021 303 ntBASIC4.07□□□□□ -1.76
DDX41Q9UJV9 RN7SL442P-201ENST00000473804 320 ntBASIC4.07□□□□□ -1.76
DDX41Q9UJV9 RPL30P12-201ENST00000474666 353 ntBASIC4.07□□□□□ -1.76
DDX41Q9UJV9 RNU6-635P-201ENST00000516651 102 ntBASIC4.07□□□□□ -1.76
DDX41Q9UJV9 SNORA70.24-201ENST00000517233 118 ntBASIC4.07□□□□□ -1.76
DDX41Q9UJV9 TGIF1P1-201ENST00000558095 802 ntBASIC4.07□□□□□ -1.76
DDX41Q9UJV9 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.07□□□□□ -1.76
DDX41Q9UJV9 AL021879.1-201ENST00000611756 288 ntBASIC4.07□□□□□ -1.76
DDX41Q9UJV9 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
DDX41Q9UJV9 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
DDX41Q9UJV9 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
DDX41Q9UJV9 Y_RNA.153-201ENST00000363615 91 ntBASIC4.06□□□□□ -1.76
DDX41Q9UJV9 SNORD115-32-201ENST00000364079 82 ntBASIC4.06□□□□□ -1.76
DDX41Q9UJV9 Y_RNA.358-201ENST00000365491 99 ntBASIC4.06□□□□□ -1.76
DDX41Q9UJV9 SNORA29-201ENST00000384183 140 ntBASIC4.06□□□□□ -1.76
DDX41Q9UJV9 Y_RNA.551-201ENST00000384661 102 ntBASIC4.06□□□□□ -1.76
DDX41Q9UJV9 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
DDX41Q9UJV9 DBIP2-201ENST00000419076 262 ntBASIC4.06□□□□□ -1.76
DDX41Q9UJV9 BX679664.1-201ENST00000434429 253 ntBASIC4.06□□□□□ -1.76
DDX41Q9UJV9 NDUFB1P1-201ENST00000435191 180 ntBASIC4.06□□□□□ -1.76
DDX41Q9UJV9 AC244670.1-201ENST00000436879 112 ntBASIC4.06□□□□□ -1.76
DDX41Q9UJV9 U8.20-201ENST00000459445 131 ntBASIC4.06□□□□□ -1.76
DDX41Q9UJV9 RPS4XP22-201ENST00000480755 780 ntBASIC4.06□□□□□ -1.76
DDX41Q9UJV9 RPL30P1-201ENST00000488676 339 ntBASIC4.06□□□□□ -1.76
DDX41Q9UJV9 GZMAP1-201ENST00000503054 631 ntBASIC4.06□□□□□ -1.76
DDX41Q9UJV9 AC091874.1-201ENST00000511402 339 ntBASIC4.06□□□□□ -1.76
DDX41Q9UJV9 Y_RNA.715-201ENST00000517082 110 ntBASIC4.06□□□□□ -1.76
DDX41Q9UJV9 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.06□□□□□ -1.76
DDX41Q9UJV9 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.06□□□□□ -1.76
DDX41Q9UJV9 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.06□□□□□ -1.76
DDX41Q9UJV9 AL390123.1-201ENST00000603216 237 ntBASIC4.06□□□□□ -1.76
DDX41Q9UJV9 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.06□□□□□ -1.76
DDX41Q9UJV9 AL513302.2-201ENST00000562313 1842 ntBASIC4.06□□□□□ -1.76
DDX41Q9UJV9 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.06□□□□□ -1.76
DDX41Q9UJV9 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 161.9 ms