Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AP003400.6-201ENST00000624698 740 ntBASIC-0.16□□□□□ -2.43
SCN11AQ9UI33 AL159972.1-201ENST00000625150 448 ntBASIC-0.16□□□□□ -2.43
SCN11AQ9UI33 MIR371B-201ENST00000638082 66 ntBASIC-0.16□□□□□ -2.43
SCN11AQ9UI33 Y_RNA.124-201ENST00000363339 93 ntBASIC-0.17□□□□□ -2.44
SCN11AQ9UI33 RNU6ATAC8P-201ENST00000408460 126 ntBASIC-0.17□□□□□ -2.44
SCN11AQ9UI33 RPL22P18-201ENST00000417197 377 ntBASIC-0.17□□□□□ -2.44
SCN11AQ9UI33 FABP5P4-201ENST00000437203 171 ntBASIC-0.17□□□□□ -2.44
SCN11AQ9UI33 U7.7-201ENST00000459276 60 ntBASIC-0.17□□□□□ -2.44
SCN11AQ9UI33 AC113420.1-201ENST00000507903 571 ntBASIC-0.17□□□□□ -2.44
SCN11AQ9UI33 AC079598.5-201ENST00000547460 117 ntBASIC-0.17□□□□□ -2.44
SCN11AQ9UI33 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC-0.17□□□□□ -2.44
SCN11AQ9UI33 Y_RNA.99-201ENST00000363138 105 ntBASIC-0.17□□□□□ -2.44
SCN11AQ9UI33 RNU6-163P-201ENST00000384396 106 ntBASIC-0.17□□□□□ -2.44
SCN11AQ9UI33 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC-0.17□□□□□ -2.44
SCN11AQ9UI33 RAB28P5-201ENST00000427490 651 ntBASIC-0.17□□□□□ -2.44
SCN11AQ9UI33 SNRPEP9-201ENST00000436794 238 ntBASIC-0.17□□□□□ -2.44
SCN11AQ9UI33 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC-0.17□□□□□ -2.44
SCN11AQ9UI33 AL096829.2-201ENST00000446582 742 ntBASIC-0.17□□□□□ -2.44
SCN11AQ9UI33 AC092685.1-201ENST00000447960 1243 ntBASIC-0.17□□□□□ -2.44
SCN11AQ9UI33 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC-0.17□□□□□ -2.44
SCN11AQ9UI33 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC-0.17□□□□□ -2.44
SCN11AQ9UI33 AC048334.1-201ENST00000477975 159 ntBASIC-0.17□□□□□ -2.44
SCN11AQ9UI33 AL160314.1-201ENST00000490836 438 ntBASIC-0.17□□□□□ -2.44
SCN11AQ9UI33 AC113398.2-201ENST00000507630 558 ntBASIC-0.17□□□□□ -2.44
SCN11AQ9UI33 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC-0.17□□□□□ -2.44
SCN11AQ9UI33 RNU6-581P-201ENST00000516214 105 ntBASIC-0.17□□□□□ -2.44
SCN11AQ9UI33 RNU6-678P-201ENST00000516832 109 ntBASIC-0.17□□□□□ -2.44
SCN11AQ9UI33 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC-0.17□□□□□ -2.44
SCN11AQ9UI33 HMGB1P33-201ENST00000563485 527 ntBASIC-0.17□□□□□ -2.44
SCN11AQ9UI33 MIR3169-201ENST00000578032 83 ntBASIC-0.17□□□□□ -2.44
SCN11AQ9UI33 AC091057.3-201ENST00000602684 733 ntBASIC-0.17□□□□□ -2.44
SCN11AQ9UI33 AC091805.2-201ENST00000603848 235 ntBASIC-0.17□□□□□ -2.44
SCN11AQ9UI33 AC068205.3-201ENST00000636385 468 ntBASIC-0.17□□□□□ -2.44
SCN11AQ9UI33 RNU6-1280P-201ENST00000365211 107 ntBASIC-0.18□□□□□ -2.44
SCN11AQ9UI33 RNU6-296P-201ENST00000384608 107 ntBASIC-0.18□□□□□ -2.44
SCN11AQ9UI33 AC007435.1-201ENST00000421086 415 ntBASIC-0.18□□□□□ -2.44
SCN11AQ9UI33 AL589872.1-201ENST00000426602 288 ntBASIC-0.18□□□□□ -2.44
SCN11AQ9UI33 RPP40P1-201ENST00000426762 456 ntBASIC-0.18□□□□□ -2.44
SCN11AQ9UI33 AC093422.3-201ENST00000428506 305 ntBASIC-0.18□□□□□ -2.44
SCN11AQ9UI33 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC-0.18□□□□□ -2.44
SCN11AQ9UI33 AL162395.1-201ENST00000457882 422 ntBASIC-0.18□□□□□ -2.44
SCN11AQ9UI33 SNORA68.3-201ENST00000515906 83 ntBASIC-0.18□□□□□ -2.44
SCN11AQ9UI33 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC-0.18□□□□□ -2.44
SCN11AQ9UI33 AC098614.4-201ENST00000607601 462 ntBASIC-0.18□□□□□ -2.44
SCN11AQ9UI33 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.18□□□□□ -2.44
SCN11AQ9UI33 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC-0.19□□□□□ -2.44
SCN11AQ9UI33 AC060773.1-201ENST00000421698 310 ntBASIC-0.19□□□□□ -2.44
SCN11AQ9UI33 MTND1P3-201ENST00000484956 952 ntBASIC-0.19□□□□□ -2.44
SCN11AQ9UI33 AC116347.2-201ENST00000514912 523 ntBASIC-0.19□□□□□ -2.44
SCN11AQ9UI33 RN7SKP12-201ENST00000516275 143 ntBASIC-0.19□□□□□ -2.44
SCN11AQ9UI33 AC015688.6-201ENST00000577737 104 ntBASIC-0.19□□□□□ -2.44
SCN11AQ9UI33 MIR4723-201ENST00000585070 81 ntBASIC-0.19□□□□□ -2.44
SCN11AQ9UI33 AC002545.1-201ENST00000592511 181 ntBASIC-0.19□□□□□ -2.44
SCN11AQ9UI33 AC004908.3-201ENST00000610248 625 ntBASIC-0.19□□□□□ -2.44
SCN11AQ9UI33 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC-0.19□□□□□ -2.44
SCN11AQ9UI33 AC107075.1-201ENST00000613695 314 ntBASIC-0.19□□□□□ -2.44
SCN11AQ9UI33 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC-0.19□□□□□ -2.44
SCN11AQ9UI33 RNU6-529P-201ENST00000363383 104 ntBASIC-0.19□□□□□ -2.44
SCN11AQ9UI33 RNU6-152P-201ENST00000384037 107 ntBASIC-0.19□□□□□ -2.44
SCN11AQ9UI33 RNA5SP111-201ENST00000411386 101 ntBASIC-0.19□□□□□ -2.44
SCN11AQ9UI33 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC-0.19□□□□□ -2.44
SCN11AQ9UI33 AC245047.7-201ENST00000440265 293 ntBASIC-0.19□□□□□ -2.44
SCN11AQ9UI33 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC-0.19□□□□□ -2.44
SCN11AQ9UI33 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC-0.19□□□□□ -2.44
SCN11AQ9UI33 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC-0.19□□□□□ -2.44
SCN11AQ9UI33 MTND1P22-201ENST00000510572 951 ntBASIC-0.19□□□□□ -2.44
SCN11AQ9UI33 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.19□□□□□ -2.44
SCN11AQ9UI33 RSL24D1P11-201ENST00000591045 491 ntBASIC-0.19□□□□□ -2.44
SCN11AQ9UI33 AP002906.1-201ENST00000603405 233 ntBASIC-0.19□□□□□ -2.44
SCN11AQ9UI33 AC004805.2-201ENST00000605382 482 ntBASIC-0.19□□□□□ -2.44
SCN11AQ9UI33 AC239868.4-201ENST00000608318 671 ntBASIC-0.19□□□□□ -2.44
SCN11AQ9UI33 AL133445.2-201ENST00000611191 527 ntBASIC-0.19□□□□□ -2.44
SCN11AQ9UI33 AC021506.2-201ENST00000612354 169 ntBASIC-0.19□□□□□ -2.44
SCN11AQ9UI33 MIR103A1-201ENST00000362165 78 ntBASIC-0.2□□□□□ -2.44
SCN11AQ9UI33 SNORD44.1-201ENST00000363202 61 ntBASIC-0.2□□□□□ -2.44
SCN11AQ9UI33 RNU6-793P-201ENST00000384233 104 ntBASIC-0.2□□□□□ -2.44
SCN11AQ9UI33 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC-0.2□□□□□ -2.44
SCN11AQ9UI33 AL109755.1-201ENST00000401791 649 ntBASIC-0.2□□□□□ -2.44
SCN11AQ9UI33 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC-0.2□□□□□ -2.44
SCN11AQ9UI33 RPS26P48-201ENST00000491713 339 ntBASIC-0.2□□□□□ -2.44
SCN11AQ9UI33 AC025459.1-201ENST00000504072 156 ntBASIC-0.2□□□□□ -2.44
SCN11AQ9UI33 MTCYBP40-201ENST00000509390 1135 ntBASIC-0.2□□□□□ -2.44
SCN11AQ9UI33 AC079140.3-201ENST00000511111 550 ntBASIC-0.2□□□□□ -2.44
SCN11AQ9UI33 RNA5SP290-201ENST00000517133 127 ntBASIC-0.2□□□□□ -2.44
SCN11AQ9UI33 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC-0.2□□□□□ -2.44
SCN11AQ9UI33 MIRLET7D-201ENST00000362263 87 ntBASIC-0.21□□□□□ -2.44
SCN11AQ9UI33 SNORD114-19-201ENST00000363072 75 ntBASIC-0.21□□□□□ -2.44
SCN11AQ9UI33 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC-0.21□□□□□ -2.44
SCN11AQ9UI33 RNU6-1067P-201ENST00000384752 107 ntBASIC-0.21□□□□□ -2.44
SCN11AQ9UI33 RNA5SP219-201ENST00000390940 113 ntBASIC-0.21□□□□□ -2.44
SCN11AQ9UI33 RAC1P8-201ENST00000427086 527 ntBASIC-0.21□□□□□ -2.44
SCN11AQ9UI33 AL049830.1-201ENST00000468034 425 ntBASIC-0.21□□□□□ -2.44
SCN11AQ9UI33 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC-0.21□□□□□ -2.44
SCN11AQ9UI33 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.21□□□□□ -2.44
SCN11AQ9UI33 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC-0.21□□□□□ -2.44
SCN11AQ9UI33 AC017104.5-201ENST00000637647 639 ntBASIC-0.21□□□□□ -2.44
SCN11AQ9UI33 RNU4-79P-201ENST00000362764 141 ntBASIC-0.22□□□□□ -2.44
SCN11AQ9UI33 RNU6-833P-201ENST00000363486 107 ntBASIC-0.22□□□□□ -2.44
SCN11AQ9UI33 SNORA80D-201ENST00000384488 135 ntBASIC-0.22□□□□□ -2.44
SCN11AQ9UI33 RNA5SP496-201ENST00000391240 109 ntBASIC-0.22□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms