Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.67□□□□□ -1.98
LIMA1Q9UHB6 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
LIMA1Q9UHB6 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
LIMA1Q9UHB6 RNU1-72P-201ENST00000362976 153 ntBASIC2.67□□□□□ -1.98
LIMA1Q9UHB6 Y_RNA.100-201ENST00000363141 102 ntBASIC2.67□□□□□ -1.98
LIMA1Q9UHB6 Y_RNA.157-201ENST00000363638 102 ntBASIC2.67□□□□□ -1.98
LIMA1Q9UHB6 Y_RNA.530-201ENST00000384587 101 ntBASIC2.67□□□□□ -1.98
LIMA1Q9UHB6 MIR483-201ENST00000385070 76 ntBASIC2.67□□□□□ -1.98
LIMA1Q9UHB6 RNU2-52P-201ENST00000410680 190 ntBASIC2.67□□□□□ -1.98
LIMA1Q9UHB6 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.67□□□□□ -1.98
LIMA1Q9UHB6 NDUFA5P4-201ENST00000436704 385 ntBASIC2.67□□□□□ -1.98
LIMA1Q9UHB6 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.67□□□□□ -1.98
LIMA1Q9UHB6 MTCO3P18-201ENST00000440206 761 ntBASIC2.67□□□□□ -1.98
LIMA1Q9UHB6 AL359672.1-201ENST00000442302 409 ntBASIC2.67□□□□□ -1.98
LIMA1Q9UHB6 AC124916.1-201ENST00000444020 547 ntBASIC2.67□□□□□ -1.98
LIMA1Q9UHB6 AC007547.1-201ENST00000462177 490 ntBASIC2.67□□□□□ -1.98
LIMA1Q9UHB6 RPL31P58-201ENST00000469001 379 ntBASIC2.67□□□□□ -1.98
LIMA1Q9UHB6 AC090096.1-201ENST00000489168 390 ntBASIC2.67□□□□□ -1.98
LIMA1Q9UHB6 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.67□□□□□ -1.98
LIMA1Q9UHB6 RN7SKP24-201ENST00000515888 284 ntBASIC2.67□□□□□ -1.98
LIMA1Q9UHB6 RNA5SP320-201ENST00000516263 124 ntBASIC2.67□□□□□ -1.98
LIMA1Q9UHB6 AC118273.2-201ENST00000532092 465 ntBASIC2.67□□□□□ -1.98
LIMA1Q9UHB6 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.67□□□□□ -1.98
LIMA1Q9UHB6 AC027176.1-201ENST00000560204 514 ntBASIC2.67□□□□□ -1.98
LIMA1Q9UHB6 MIR548S-201ENST00000581352 82 ntBASIC2.67□□□□□ -1.98
LIMA1Q9UHB6 VN1R107P-201ENST00000601784 209 ntBASIC2.67□□□□□ -1.98
LIMA1Q9UHB6 RPL12P50-201ENST00000603116 116 ntBASIC2.67□□□□□ -1.98
LIMA1Q9UHB6 AC005000.2-201ENST00000605468 310 ntBASIC2.67□□□□□ -1.98
LIMA1Q9UHB6 AC067747.1-201ENST00000608026 250 ntBASIC2.67□□□□□ -1.98
LIMA1Q9UHB6 AC135507.2-201ENST00000612443 309 ntBASIC2.67□□□□□ -1.98
LIMA1Q9UHB6 uc_338.15-201ENST00000615470 191 ntBASIC2.67□□□□□ -1.98
LIMA1Q9UHB6 AC007792.1-201ENST00000623023 402 ntBASIC2.67□□□□□ -1.98
LIMA1Q9UHB6 AC090617.10-201ENST00000624308 134 ntBASIC2.67□□□□□ -1.98
LIMA1Q9UHB6 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.67□□□□□ -1.98
LIMA1Q9UHB6 AL365361.1-201ENST00000566942 3481 ntBASIC2.67□□□□□ -1.98
LIMA1Q9UHB6 AC002543.1-201ENST00000299783 1954 ntBASIC2.67□□□□□ -1.98
LIMA1Q9UHB6 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
LIMA1Q9UHB6 CASC19-280ENST00000642102 1351 ntBASIC2.66□□□□□ -1.98
LIMA1Q9UHB6 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
LIMA1Q9UHB6 RNU6-212P-201ENST00000362642 104 ntBASIC2.66□□□□□ -1.98
LIMA1Q9UHB6 SNORD113-7-201ENST00000363762 77 ntBASIC2.66□□□□□ -1.98
LIMA1Q9UHB6 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
LIMA1Q9UHB6 MIR544A-201ENST00000384855 91 ntBASIC2.66□□□□□ -1.98
LIMA1Q9UHB6 AL445529.1-201ENST00000398713 389 ntBASIC2.66□□□□□ -1.98
LIMA1Q9UHB6 MIR450B-201ENST00000401182 78 ntBASIC2.66□□□□□ -1.98
LIMA1Q9UHB6 AC008267.5-201ENST00000424928 265 ntBASIC2.66□□□□□ -1.98
LIMA1Q9UHB6 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.66□□□□□ -1.98
LIMA1Q9UHB6 AC243964.1-201ENST00000441814 261 ntBASIC2.66□□□□□ -1.98
LIMA1Q9UHB6 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.66□□□□□ -1.98
LIMA1Q9UHB6 AL353572.1-201ENST00000442490 417 ntBASIC2.66□□□□□ -1.98
LIMA1Q9UHB6 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.66□□□□□ -1.98
LIMA1Q9UHB6 RNU7-66P-201ENST00000459469 62 ntBASIC2.66□□□□□ -1.98
LIMA1Q9UHB6 AC073901.1-201ENST00000462471 408 ntBASIC2.66□□□□□ -1.98
LIMA1Q9UHB6 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.66□□□□□ -1.98
LIMA1Q9UHB6 AC140059.1-201ENST00000489238 361 ntBASIC2.66□□□□□ -1.98
LIMA1Q9UHB6 AC008628.2-201ENST00000502605 298 ntBASIC2.66□□□□□ -1.98
LIMA1Q9UHB6 FAM206BP-201ENST00000510179 541 ntBASIC2.66□□□□□ -1.98
LIMA1Q9UHB6 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.66□□□□□ -1.98
LIMA1Q9UHB6 RPPH1-2P-201ENST00000516688 293 ntBASIC2.66□□□□□ -1.98
LIMA1Q9UHB6 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.66□□□□□ -1.98
LIMA1Q9UHB6 AC104576.1-201ENST00000524225 88 ntBASIC2.66□□□□□ -1.98
LIMA1Q9UHB6 PSMA3P-201ENST00000555485 635 ntBASIC2.66□□□□□ -1.98
LIMA1Q9UHB6 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.66□□□□□ -1.98
LIMA1Q9UHB6 AC023824.2-201ENST00000566185 400 ntBASIC2.66□□□□□ -1.98
LIMA1Q9UHB6 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.66□□□□□ -1.98
LIMA1Q9UHB6 AC100810.6-201ENST00000638068 285 ntBASIC2.66□□□□□ -1.98
LIMA1Q9UHB6 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.66□□□□□ -1.98
LIMA1Q9UHB6 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.66□□□□□ -1.98
LIMA1Q9UHB6 Y_RNA.40-201ENST00000362645 93 ntBASIC2.65□□□□□ -1.99
LIMA1Q9UHB6 RNU6-254P-201ENST00000363377 107 ntBASIC2.65□□□□□ -1.99
LIMA1Q9UHB6 RNU6-529P-201ENST00000363383 104 ntBASIC2.65□□□□□ -1.99
LIMA1Q9UHB6 RNU6-692P-201ENST00000384496 107 ntBASIC2.65□□□□□ -1.99
LIMA1Q9UHB6 MIR518C-201ENST00000384822 101 ntBASIC2.65□□□□□ -1.99
LIMA1Q9UHB6 MT-TL1-201ENST00000386347 75 ntBASIC2.65□□□□□ -1.99
LIMA1Q9UHB6 RNU6-1106P-201ENST00000390845 107 ntBASIC2.65□□□□□ -1.99
LIMA1Q9UHB6 AC096664.2-201ENST00000411843 406 ntBASIC2.65□□□□□ -1.99
LIMA1Q9UHB6 AC138393.2-201ENST00000414742 246 ntBASIC2.65□□□□□ -1.99
LIMA1Q9UHB6 AL139413.1-201ENST00000421309 217 ntBASIC2.65□□□□□ -1.99
LIMA1Q9UHB6 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.65□□□□□ -1.99
LIMA1Q9UHB6 RPS15AP10-201ENST00000432472 382 ntBASIC2.65□□□□□ -1.99
LIMA1Q9UHB6 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.65□□□□□ -1.99
LIMA1Q9UHB6 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.65□□□□□ -1.99
LIMA1Q9UHB6 RPL39P29-201ENST00000447779 157 ntBASIC2.65□□□□□ -1.99
LIMA1Q9UHB6 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.65□□□□□ -1.99
LIMA1Q9UHB6 MTCO2P30-201ENST00000503662 364 ntBASIC2.65□□□□□ -1.99
LIMA1Q9UHB6 RNU2-53P-201ENST00000516257 147 ntBASIC2.65□□□□□ -1.99
LIMA1Q9UHB6 RNU6-1332P-201ENST00000516666 104 ntBASIC2.65□□□□□ -1.99
LIMA1Q9UHB6 SNORA20.3-201ENST00000516880 132 ntBASIC2.65□□□□□ -1.99
LIMA1Q9UHB6 AC109329.2-201ENST00000519658 482 ntBASIC2.65□□□□□ -1.99
LIMA1Q9UHB6 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.65□□□□□ -1.99
LIMA1Q9UHB6 MIR5571-201ENST00000577998 113 ntBASIC2.65□□□□□ -1.99
LIMA1Q9UHB6 AC091135.1-201ENST00000585943 307 ntBASIC2.65□□□□□ -1.99
LIMA1Q9UHB6 AC009314.1-201ENST00000603871 304 ntBASIC2.65□□□□□ -1.99
LIMA1Q9UHB6 ELOCP5-201ENST00000604924 333 ntBASIC2.65□□□□□ -1.99
LIMA1Q9UHB6 AL033523.1-201ENST00000605153 153 ntBASIC2.65□□□□□ -1.99
LIMA1Q9UHB6 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.65□□□□□ -1.99
LIMA1Q9UHB6 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.65□□□□□ -1.99
LIMA1Q9UHB6 U4.3-201ENST00000621047 82 ntBASIC2.65□□□□□ -1.99
LIMA1Q9UHB6 FO624990.1-201ENST00000636373 85 ntBASIC2.65□□□□□ -1.99
LIMA1Q9UHB6 AC241585.2-209ENST00000638217 143 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 142.6 ms