Protein–RNA interactions for Protein: Q9NZR4

VSX1, Visual system homeobox 1, humanhuman

Predicted RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1Q9NZR4 AL356968.1-201ENST00000416622 474 ntBASIC3.14□□□□□ -1.91
VSX1Q9NZR4 AL445584.1-201ENST00000431451 330 ntBASIC3.14□□□□□ -1.91
VSX1Q9NZR4 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.14□□□□□ -1.91
VSX1Q9NZR4 AL353705.4-201ENST00000449661 238 ntBASIC3.14□□□□□ -1.91
VSX1Q9NZR4 CHEK2P4-201ENST00000450340 246 ntBASIC3.14□□□□□ -1.91
VSX1Q9NZR4 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.14□□□□□ -1.91
VSX1Q9NZR4 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.14□□□□□ -1.91
VSX1Q9NZR4 AC010655.3-201ENST00000478818 450 ntBASIC3.14□□□□□ -1.91
VSX1Q9NZR4 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.14□□□□□ -1.91
VSX1Q9NZR4 RNU5B-3P-201ENST00000516601 115 ntBASIC3.14□□□□□ -1.91
VSX1Q9NZR4 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.14□□□□□ -1.91
VSX1Q9NZR4 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.14□□□□□ -1.91
VSX1Q9NZR4 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.14□□□□□ -1.91
VSX1Q9NZR4 AL159153.1-201ENST00000619688 317 ntBASIC3.14□□□□□ -1.91
VSX1Q9NZR4 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.14□□□□□ -1.91
VSX1Q9NZR4 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
VSX1Q9NZR4 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.14□□□□□ -1.91
VSX1Q9NZR4 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
VSX1Q9NZR4 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
VSX1Q9NZR4 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.14□□□□□ -1.91
VSX1Q9NZR4 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.14□□□□□ -1.91
VSX1Q9NZR4 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.13□□□□□ -1.91
VSX1Q9NZR4 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.13□□□□□ -1.91
VSX1Q9NZR4 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.13□□□□□ -1.91
VSX1Q9NZR4 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
VSX1Q9NZR4 SNORD9-201ENST00000362566 104 ntBASIC3.13□□□□□ -1.91
VSX1Q9NZR4 RNA5SP124-201ENST00000362739 110 ntBASIC3.13□□□□□ -1.91
VSX1Q9NZR4 SNORD32A-201ENST00000364805 84 ntBASIC3.13□□□□□ -1.91
VSX1Q9NZR4 SET-203ENST00000372688 801 ntTSL 2 BASIC3.13□□□□□ -1.91
VSX1Q9NZR4 SNORA51.11-201ENST00000384442 131 ntBASIC3.13□□□□□ -1.91
VSX1Q9NZR4 RNU6-748P-201ENST00000384648 107 ntBASIC3.13□□□□□ -1.91
VSX1Q9NZR4 RNU6-713P-201ENST00000384761 107 ntBASIC3.13□□□□□ -1.91
VSX1Q9NZR4 AL358453.1-201ENST00000422522 250 ntBASIC3.13□□□□□ -1.91
VSX1Q9NZR4 RPL21P40-201ENST00000428586 483 ntBASIC3.13□□□□□ -1.91
VSX1Q9NZR4 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.13□□□□□ -1.91
VSX1Q9NZR4 CYCSP32-201ENST00000440548 321 ntBASIC3.13□□□□□ -1.91
VSX1Q9NZR4 AL161651.1-201ENST00000440882 223 ntBASIC3.13□□□□□ -1.91
VSX1Q9NZR4 AL031659.1-201ENST00000447075 539 ntBASIC3.13□□□□□ -1.91
VSX1Q9NZR4 RNU7-169P-201ENST00000459456 61 ntBASIC3.13□□□□□ -1.91
VSX1Q9NZR4 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.13□□□□□ -1.91
VSX1Q9NZR4 RPL23AP75-201ENST00000491601 451 ntBASIC3.13□□□□□ -1.91
VSX1Q9NZR4 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.13□□□□□ -1.91
VSX1Q9NZR4 ANXA2P1-201ENST00000505539 926 ntBASIC3.13□□□□□ -1.91
VSX1Q9NZR4 AC074250.1-201ENST00000511117 192 ntBASIC3.13□□□□□ -1.91
VSX1Q9NZR4 SNORA70.19-201ENST00000516717 90 ntBASIC3.13□□□□□ -1.91
VSX1Q9NZR4 ACA59.2-201ENST00000517061 156 ntBASIC3.13□□□□□ -1.91
VSX1Q9NZR4 SNORA31.23-201ENST00000517219 133 ntBASIC3.13□□□□□ -1.91
VSX1Q9NZR4 AC034114.1-201ENST00000520293 285 ntBASIC3.13□□□□□ -1.91
VSX1Q9NZR4 AC115990.1-201ENST00000526957 301 ntBASIC3.13□□□□□ -1.91
VSX1Q9NZR4 AL442163.3-201ENST00000554110 156 ntBASIC3.13□□□□□ -1.91
VSX1Q9NZR4 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.13□□□□□ -1.91
VSX1Q9NZR4 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.13□□□□□ -1.91
VSX1Q9NZR4 AC006557.5-201ENST00000603126 811 ntBASIC3.13□□□□□ -1.91
VSX1Q9NZR4 RPL23AP88-201ENST00000605759 454 ntBASIC3.13□□□□□ -1.91
VSX1Q9NZR4 AL121655.1-201ENST00000605811 308 ntBASIC3.13□□□□□ -1.91
VSX1Q9NZR4 AL121772.2-201ENST00000614331 297 ntBASIC3.13□□□□□ -1.91
VSX1Q9NZR4 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.13□□□□□ -1.91
VSX1Q9NZR4 Z75746.1-201ENST00000440243 2080 ntBASIC3.13□□□□□ -1.91
VSX1Q9NZR4 AC002543.1-201ENST00000299783 1954 ntBASIC3.12□□□□□ -1.91
VSX1Q9NZR4 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.12□□□□□ -1.91
VSX1Q9NZR4 RNU6-450P-201ENST00000364654 107 ntBASIC3.12□□□□□ -1.91
VSX1Q9NZR4 RNU6-17P-201ENST00000384245 107 ntBASIC3.12□□□□□ -1.91
VSX1Q9NZR4 RNU6-198P-201ENST00000384258 104 ntBASIC3.12□□□□□ -1.91
VSX1Q9NZR4 RNU6-18P-201ENST00000384527 107 ntBASIC3.12□□□□□ -1.91
VSX1Q9NZR4 MIR153-2-201ENST00000385225 87 ntBASIC3.12□□□□□ -1.91
VSX1Q9NZR4 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.12□□□□□ -1.91
VSX1Q9NZR4 AC010099.1-201ENST00000455434 375 ntBASIC3.12□□□□□ -1.91
VSX1Q9NZR4 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.12□□□□□ -1.91
VSX1Q9NZR4 RPS4XP2-201ENST00000458402 793 ntBASIC3.12□□□□□ -1.91
VSX1Q9NZR4 SNORD105B-201ENST00000458770 79 ntBASIC3.12□□□□□ -1.91
VSX1Q9NZR4 AC021205.2-201ENST00000480069 347 ntBASIC3.12□□□□□ -1.91
VSX1Q9NZR4 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.12□□□□□ -1.91
VSX1Q9NZR4 RPS29P20-201ENST00000489592 171 ntBASIC3.12□□□□□ -1.91
VSX1Q9NZR4 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.12□□□□□ -1.91
VSX1Q9NZR4 SNORA31.1-201ENST00000515993 133 ntBASIC3.12□□□□□ -1.91
VSX1Q9NZR4 SNORA31.5-201ENST00000516190 133 ntBASIC3.12□□□□□ -1.91
VSX1Q9NZR4 RNU6-581P-201ENST00000516214 105 ntBASIC3.12□□□□□ -1.91
VSX1Q9NZR4 AC109329.1-201ENST00000518744 317 ntBASIC3.12□□□□□ -1.91
VSX1Q9NZR4 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.12□□□□□ -1.91
VSX1Q9NZR4 AC090617.3-201ENST00000573670 475 ntBASIC3.12□□□□□ -1.91
VSX1Q9NZR4 MIR5571-201ENST00000577998 113 ntBASIC3.12□□□□□ -1.91
VSX1Q9NZR4 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.12□□□□□ -1.91
VSX1Q9NZR4 AL138963.2-201ENST00000605137 226 ntBASIC3.12□□□□□ -1.91
VSX1Q9NZR4 AC096772.1-201ENST00000609146 564 ntBASIC3.12□□□□□ -1.91
VSX1Q9NZR4 AC107294.3-201ENST00000609211 526 ntBASIC3.12□□□□□ -1.91
VSX1Q9NZR4 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.12□□□□□ -1.91
VSX1Q9NZR4 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.12□□□□□ -1.91
VSX1Q9NZR4 RNU6-1159P-201ENST00000362933 107 ntBASIC3.11□□□□□ -1.91
VSX1Q9NZR4 RNU5F-3P-201ENST00000363767 117 ntBASIC3.11□□□□□ -1.91
VSX1Q9NZR4 Y_RNA.210-201ENST00000364161 110 ntBASIC3.11□□□□□ -1.91
VSX1Q9NZR4 RNU6-611P-201ENST00000384276 104 ntBASIC3.11□□□□□ -1.91
VSX1Q9NZR4 RNU6-19P-201ENST00000384718 107 ntBASIC3.11□□□□□ -1.91
VSX1Q9NZR4 RNA5SP38-201ENST00000410750 119 ntBASIC3.11□□□□□ -1.91
VSX1Q9NZR4 CYCSP19-201ENST00000411715 316 ntBASIC3.11□□□□□ -1.91
VSX1Q9NZR4 AL035423.1-201ENST00000420331 213 ntBASIC3.11□□□□□ -1.91
VSX1Q9NZR4 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.11□□□□□ -1.91
VSX1Q9NZR4 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.11□□□□□ -1.91
VSX1Q9NZR4 AC005300.1-201ENST00000428401 373 ntBASIC3.11□□□□□ -1.91
VSX1Q9NZR4 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.11□□□□□ -1.91
VSX1Q9NZR4 AC009296.1-201ENST00000443146 155 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 170.5 ms