Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
NLRC4Q9NPP4 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
NLRC4Q9NPP4 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.04□□□□□ -1.92
NLRC4Q9NPP4 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.03□□□□□ -1.92
NLRC4Q9NPP4 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.03□□□□□ -1.92
NLRC4Q9NPP4 RNU6-227P-201ENST00000362865 103 ntBASIC3.03□□□□□ -1.92
NLRC4Q9NPP4 RNU6-1285P-201ENST00000363480 105 ntBASIC3.03□□□□□ -1.92
NLRC4Q9NPP4 Y_RNA.279-201ENST00000364763 95 ntBASIC3.03□□□□□ -1.92
NLRC4Q9NPP4 RNU1-109P-201ENST00000383960 147 ntBASIC3.03□□□□□ -1.92
NLRC4Q9NPP4 CBX3P9-201ENST00000402326 552 ntBASIC3.03□□□□□ -1.92
NLRC4Q9NPP4 RNU2-63P-201ENST00000410792 194 ntBASIC3.03□□□□□ -1.92
NLRC4Q9NPP4 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.03□□□□□ -1.92
NLRC4Q9NPP4 AL139396.1-201ENST00000421137 167 ntBASIC3.03□□□□□ -1.92
NLRC4Q9NPP4 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.03□□□□□ -1.92
NLRC4Q9NPP4 MTND3P9-201ENST00000429526 346 ntBASIC3.03□□□□□ -1.92
NLRC4Q9NPP4 RPL21P2-201ENST00000440049 481 ntBASIC3.03□□□□□ -1.92
NLRC4Q9NPP4 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.03□□□□□ -1.92
NLRC4Q9NPP4 RNU7-187P-201ENST00000458985 68 ntBASIC3.03□□□□□ -1.92
NLRC4Q9NPP4 RPS29P26-201ENST00000477483 171 ntBASIC3.03□□□□□ -1.92
NLRC4Q9NPP4 AC103975.1-201ENST00000482506 483 ntBASIC3.03□□□□□ -1.92
NLRC4Q9NPP4 AC116353.2-201ENST00000505332 712 ntBASIC3.03□□□□□ -1.92
NLRC4Q9NPP4 RNA5SP341-201ENST00000516261 117 ntBASIC3.03□□□□□ -1.92
NLRC4Q9NPP4 RNU6-566P-201ENST00000516790 107 ntBASIC3.03□□□□□ -1.92
NLRC4Q9NPP4 RNU6-1088P-201ENST00000516850 104 ntBASIC3.03□□□□□ -1.92
NLRC4Q9NPP4 HSPE1P4-201ENST00000550617 308 ntBASIC3.03□□□□□ -1.92
NLRC4Q9NPP4 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.03□□□□□ -1.92
NLRC4Q9NPP4 ZNF861P-201ENST00000588126 639 ntBASIC3.03□□□□□ -1.92
NLRC4Q9NPP4 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.03□□□□□ -1.92
NLRC4Q9NPP4 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.03□□□□□ -1.92
NLRC4Q9NPP4 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NLRC4Q9NPP4 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NLRC4Q9NPP4 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.02□□□□□ -1.93
NLRC4Q9NPP4 AC135776.4-201ENST00000624300 1904 ntBASIC3.02□□□□□ -1.93
NLRC4Q9NPP4 RNU1-72P-201ENST00000362976 153 ntBASIC3.02□□□□□ -1.93
NLRC4Q9NPP4 SNORD32A-201ENST00000364805 84 ntBASIC3.02□□□□□ -1.93
NLRC4Q9NPP4 Y_RNA.301-201ENST00000364990 103 ntBASIC3.02□□□□□ -1.93
NLRC4Q9NPP4 RNU6-790P-201ENST00000384479 105 ntBASIC3.02□□□□□ -1.93
NLRC4Q9NPP4 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
NLRC4Q9NPP4 AL138885.1-201ENST00000405921 675 ntBASIC3.02□□□□□ -1.93
NLRC4Q9NPP4 AIMP1P2-201ENST00000425294 312 ntBASIC3.02□□□□□ -1.93
NLRC4Q9NPP4 AC078809.1-201ENST00000427601 140 ntBASIC3.02□□□□□ -1.93
NLRC4Q9NPP4 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.02□□□□□ -1.93
NLRC4Q9NPP4 AC244670.1-201ENST00000436879 112 ntBASIC3.02□□□□□ -1.93
NLRC4Q9NPP4 USP9YP8-201ENST00000441913 500 ntBASIC3.02□□□□□ -1.93
NLRC4Q9NPP4 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.02□□□□□ -1.93
NLRC4Q9NPP4 PCMTD1P1-201ENST00000455560 355 ntBASIC3.02□□□□□ -1.93
NLRC4Q9NPP4 MTND1P11-201ENST00000456661 876 ntBASIC3.02□□□□□ -1.93
NLRC4Q9NPP4 CYP2C59P-201ENST00000457790 269 ntBASIC3.02□□□□□ -1.93
NLRC4Q9NPP4 PMCHL2-203ENST00000457791 237 ntBASIC3.02□□□□□ -1.93
NLRC4Q9NPP4 AC090515.1-201ENST00000465295 476 ntBASIC3.02□□□□□ -1.93
NLRC4Q9NPP4 AIG1P1-201ENST00000503376 148 ntBASIC3.02□□□□□ -1.93
NLRC4Q9NPP4 AC016632.1-201ENST00000503994 196 ntBASIC3.02□□□□□ -1.93
NLRC4Q9NPP4 RNA5SP454-201ENST00000517231 127 ntBASIC3.02□□□□□ -1.93
NLRC4Q9NPP4 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.02□□□□□ -1.93
NLRC4Q9NPP4 AC007375.1-201ENST00000554513 578 ntBASIC3.02□□□□□ -1.93
NLRC4Q9NPP4 AC093249.1-201ENST00000567049 203 ntBASIC3.02□□□□□ -1.93
NLRC4Q9NPP4 AC005668.1-201ENST00000571142 476 ntBASIC3.02□□□□□ -1.93
NLRC4Q9NPP4 MTCO3P13-201ENST00000577757 781 ntBASIC3.02□□□□□ -1.93
NLRC4Q9NPP4 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.02□□□□□ -1.93
NLRC4Q9NPP4 AC023043.3-201ENST00000593113 385 ntBASIC3.02□□□□□ -1.93
NLRC4Q9NPP4 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.02□□□□□ -1.93
NLRC4Q9NPP4 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.02□□□□□ -1.93
NLRC4Q9NPP4 AC009541.1-201ENST00000438279 2662 ntBASIC3.02□□□□□ -1.93
NLRC4Q9NPP4 AP000560.1-201ENST00000624150 1937 ntBASIC3.01□□□□□ -1.93
NLRC4Q9NPP4 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.01□□□□□ -1.93
NLRC4Q9NPP4 RNA5SP240-201ENST00000365355 128 ntBASIC3.01□□□□□ -1.93
NLRC4Q9NPP4 Y_RNA.390-201ENST00000383932 102 ntBASIC3.01□□□□□ -1.93
NLRC4Q9NPP4 MIR521-1-201ENST00000384902 87 ntBASIC3.01□□□□□ -1.93
NLRC4Q9NPP4 RN7SKP32-201ENST00000410167 303 ntBASIC3.01□□□□□ -1.93
NLRC4Q9NPP4 RN7SKP61-201ENST00000410642 295 ntBASIC3.01□□□□□ -1.93
NLRC4Q9NPP4 AC138393.2-201ENST00000414742 246 ntBASIC3.01□□□□□ -1.93
NLRC4Q9NPP4 RPL23AP95-201ENST00000426806 265 ntBASIC3.01□□□□□ -1.93
NLRC4Q9NPP4 RPL39P40-201ENST00000445481 146 ntBASIC3.01□□□□□ -1.93
NLRC4Q9NPP4 MTND3P10-201ENST00000450967 341 ntBASIC3.01□□□□□ -1.93
NLRC4Q9NPP4 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.01□□□□□ -1.93
NLRC4Q9NPP4 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.01□□□□□ -1.93
NLRC4Q9NPP4 AC090096.1-201ENST00000489168 390 ntBASIC3.01□□□□□ -1.93
NLRC4Q9NPP4 SNORA9.3-201ENST00000516383 129 ntBASIC3.01□□□□□ -1.93
NLRC4Q9NPP4 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.01□□□□□ -1.93
NLRC4Q9NPP4 MIR4790-201ENST00000577799 79 ntBASIC3.01□□□□□ -1.93
NLRC4Q9NPP4 CPDP1-201ENST00000579660 283 ntBASIC3.01□□□□□ -1.93
NLRC4Q9NPP4 MIR4325-201ENST00000583049 90 ntBASIC3.01□□□□□ -1.93
NLRC4Q9NPP4 AL713866.2-201ENST00000603579 219 ntBASIC3.01□□□□□ -1.93
NLRC4Q9NPP4 AL138963.2-201ENST00000605137 226 ntBASIC3.01□□□□□ -1.93
NLRC4Q9NPP4 AC018889.1-201ENST00000605372 397 ntBASIC3.01□□□□□ -1.93
NLRC4Q9NPP4 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
NLRC4Q9NPP4 AL133215.3-201ENST00000609801 448 ntBASIC3.01□□□□□ -1.93
NLRC4Q9NPP4 AC008121.3-201ENST00000618726 433 ntBASIC3.01□□□□□ -1.93
NLRC4Q9NPP4 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.01□□□□□ -1.93
NLRC4Q9NPP4 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
NLRC4Q9NPP4 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3□□□□□ -1.93
NLRC4Q9NPP4 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3□□□□□ -1.93
NLRC4Q9NPP4 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3□□□□□ -1.93
NLRC4Q9NPP4 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3□□□□□ -1.93
NLRC4Q9NPP4 RNU6-845P-201ENST00000362578 103 ntBASIC3□□□□□ -1.93
NLRC4Q9NPP4 Y_RNA.151-201ENST00000363566 112 ntBASIC3□□□□□ -1.93
NLRC4Q9NPP4 RNU6-851P-201ENST00000384565 107 ntBASIC3□□□□□ -1.93
NLRC4Q9NPP4 MIR483-201ENST00000385070 76 ntBASIC3□□□□□ -1.93
NLRC4Q9NPP4 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3□□□□□ -1.93
NLRC4Q9NPP4 AL360182.1-201ENST00000397433 468 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms