Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC002075.2-201ENST00000425207 252 ntBASIC3.91□□□□□ -1.78
SSU72Q9NP77 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.91□□□□□ -1.78
SSU72Q9NP77 HMGN2P10-201ENST00000448085 265 ntBASIC3.91□□□□□ -1.78
SSU72Q9NP77 AC005042.3-201ENST00000453230 174 ntBASIC3.91□□□□□ -1.78
SSU72Q9NP77 TRBV12-2-201ENST00000489763 344 ntBASIC3.91□□□□□ -1.78
SSU72Q9NP77 RN7SL604P-201ENST00000492589 296 ntBASIC3.91□□□□□ -1.78
SSU72Q9NP77 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.91□□□□□ -1.78
SSU72Q9NP77 SNORA31.16-201ENST00000516773 139 ntBASIC3.91□□□□□ -1.78
SSU72Q9NP77 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.91□□□□□ -1.78
SSU72Q9NP77 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.91□□□□□ -1.78
SSU72Q9NP77 AP002001.1-203ENST00000534002 267 ntBASIC3.91□□□□□ -1.78
SSU72Q9NP77 TVP23BP1-201ENST00000557500 617 ntBASIC3.91□□□□□ -1.78
SSU72Q9NP77 AC021231.3-201ENST00000558497 370 ntBASIC3.91□□□□□ -1.78
SSU72Q9NP77 MIR4330-201ENST00000579077 105 ntBASIC3.91□□□□□ -1.78
SSU72Q9NP77 AC084757.4-201ENST00000616350 526 ntBASIC3.91□□□□□ -1.78
SSU72Q9NP77 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.91□□□□□ -1.78
SSU72Q9NP77 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.91□□□□□ -1.78
SSU72Q9NP77 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.91□□□□□ -1.78
SSU72Q9NP77 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
SSU72Q9NP77 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.9□□□□□ -1.78
SSU72Q9NP77 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
SSU72Q9NP77 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
SSU72Q9NP77 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
SSU72Q9NP77 RNU6-1280P-201ENST00000365211 107 ntBASIC3.9□□□□□ -1.79
SSU72Q9NP77 RNU6-1130P-201ENST00000365434 107 ntBASIC3.9□□□□□ -1.79
SSU72Q9NP77 RNU6-211P-201ENST00000384047 107 ntBASIC3.9□□□□□ -1.79
SSU72Q9NP77 AL357075.1-201ENST00000404107 726 ntBASIC3.9□□□□□ -1.79
SSU72Q9NP77 AC012306.1-201ENST00000423267 114 ntBASIC3.9□□□□□ -1.79
SSU72Q9NP77 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.9□□□□□ -1.79
SSU72Q9NP77 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.9□□□□□ -1.79
SSU72Q9NP77 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.9□□□□□ -1.79
SSU72Q9NP77 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.9□□□□□ -1.79
SSU72Q9NP77 AC007215.1-201ENST00000464893 276 ntBASIC3.9□□□□□ -1.79
SSU72Q9NP77 RPL30P12-201ENST00000474666 353 ntBASIC3.9□□□□□ -1.79
SSU72Q9NP77 RNU6-928P-201ENST00000516876 104 ntBASIC3.9□□□□□ -1.79
SSU72Q9NP77 RNA5SP54-201ENST00000516951 92 ntBASIC3.9□□□□□ -1.79
SSU72Q9NP77 RN7SKP289-201ENST00000517244 295 ntBASIC3.9□□□□□ -1.79
SSU72Q9NP77 CYCSP29-201ENST00000533731 318 ntBASIC3.9□□□□□ -1.79
SSU72Q9NP77 AC018448.1-201ENST00000552843 316 ntBASIC3.9□□□□□ -1.79
SSU72Q9NP77 MIR3690-201ENST00000580266 75 ntBASIC3.9□□□□□ -1.79
SSU72Q9NP77 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.9□□□□□ -1.79
SSU72Q9NP77 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.9□□□□□ -1.79
SSU72Q9NP77 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
SSU72Q9NP77 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.9□□□□□ -1.79
SSU72Q9NP77 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SSU72Q9NP77 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
SSU72Q9NP77 MTND5P35-201ENST00000557537 1720 ntBASIC3.9□□□□□ -1.79
SSU72Q9NP77 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SSU72Q9NP77 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
SSU72Q9NP77 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.89□□□□□ -1.79
SSU72Q9NP77 ADAM3A-203ENST00000461344 2157 ntBASIC3.89□□□□□ -1.79
SSU72Q9NP77 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.89□□□□□ -1.79
SSU72Q9NP77 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
SSU72Q9NP77 AC092268.1-201ENST00000342691 405 ntBASIC3.89□□□□□ -1.79
SSU72Q9NP77 RNA5SP515-201ENST00000364570 118 ntBASIC3.89□□□□□ -1.79
SSU72Q9NP77 Y_RNA.262-201ENST00000364641 102 ntBASIC3.89□□□□□ -1.79
SSU72Q9NP77 RNU4-56P-201ENST00000364700 142 ntBASIC3.89□□□□□ -1.79
SSU72Q9NP77 MIR199A2-201ENST00000385289 110 ntBASIC3.89□□□□□ -1.79
SSU72Q9NP77 PPIAP31-201ENST00000405422 495 ntBASIC3.89□□□□□ -1.79
SSU72Q9NP77 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.89□□□□□ -1.79
SSU72Q9NP77 HSPE1P12-201ENST00000412576 301 ntBASIC3.89□□□□□ -1.79
SSU72Q9NP77 YPEL5P1-201ENST00000419731 367 ntBASIC3.89□□□□□ -1.79
SSU72Q9NP77 BPY2DP-201ENST00000422208 265 ntBASIC3.89□□□□□ -1.79
SSU72Q9NP77 AC024067.1-201ENST00000426199 223 ntBASIC3.89□□□□□ -1.79
SSU72Q9NP77 RPL39P29-201ENST00000447779 157 ntBASIC3.89□□□□□ -1.79
SSU72Q9NP77 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.89□□□□□ -1.79
SSU72Q9NP77 HMGB3P3-201ENST00000510526 400 ntBASIC3.89□□□□□ -1.79
SSU72Q9NP77 AC005921.1-201ENST00000510589 286 ntBASIC3.89□□□□□ -1.79
SSU72Q9NP77 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.89□□□□□ -1.79
SSU72Q9NP77 AC025884.1-201ENST00000556034 378 ntBASIC3.89□□□□□ -1.79
SSU72Q9NP77 AC021739.1-201ENST00000559631 174 ntBASIC3.89□□□□□ -1.79
SSU72Q9NP77 MIR5692C2-201ENST00000577959 77 ntBASIC3.89□□□□□ -1.79
SSU72Q9NP77 AL137849.1-201ENST00000604767 169 ntBASIC3.89□□□□□ -1.79
SSU72Q9NP77 AP001485.1-201ENST00000604799 199 ntBASIC3.89□□□□□ -1.79
SSU72Q9NP77 AL591034.3-201ENST00000605511 685 ntBASIC3.89□□□□□ -1.79
SSU72Q9NP77 AC211433.2-201ENST00000608433 387 ntBASIC3.89□□□□□ -1.79
SSU72Q9NP77 AL008718.3-201ENST00000610217 321 ntBASIC3.89□□□□□ -1.79
SSU72Q9NP77 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.89□□□□□ -1.79
SSU72Q9NP77 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SSU72Q9NP77 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.89□□□□□ -1.79
SSU72Q9NP77 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.89□□□□□ -1.79
SSU72Q9NP77 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SSU72Q9NP77 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
SSU72Q9NP77 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.88□□□□□ -1.79
SSU72Q9NP77 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
SSU72Q9NP77 Y_RNA.580-201ENST00000391004 95 ntBASIC3.88□□□□□ -1.79
SSU72Q9NP77 BMS1P22-201ENST00000414726 313 ntBASIC3.88□□□□□ -1.79
SSU72Q9NP77 FTH1P6-201ENST00000430768 320 ntBASIC3.88□□□□□ -1.79
SSU72Q9NP77 RPS15AP5-201ENST00000436276 388 ntBASIC3.88□□□□□ -1.79
SSU72Q9NP77 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.88□□□□□ -1.79
SSU72Q9NP77 RNU6-625P-201ENST00000459412 107 ntBASIC3.88□□□□□ -1.79
SSU72Q9NP77 RN7SL860P-201ENST00000473738 223 ntBASIC3.88□□□□□ -1.79
SSU72Q9NP77 SUMO2P18-201ENST00000518873 252 ntBASIC3.88□□□□□ -1.79
SSU72Q9NP77 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.88□□□□□ -1.79
SSU72Q9NP77 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.88□□□□□ -1.79
SSU72Q9NP77 AC090897.2-201ENST00000581715 130 ntBASIC3.88□□□□□ -1.79
SSU72Q9NP77 AC004467.1-201ENST00000615678 330 ntBASIC3.88□□□□□ -1.79
SSU72Q9NP77 AC091953.3-201ENST00000623220 236 ntBASIC3.88□□□□□ -1.79
SSU72Q9NP77 AC091932.3-201ENST00000624223 323 ntBASIC3.88□□□□□ -1.79
SSU72Q9NP77 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms