Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.7□□□□□ -1.98
PCDH9Q9HC56 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.7□□□□□ -1.98
PCDH9Q9HC56 AC100830.2-201ENST00000581636 240 ntBASIC2.7□□□□□ -1.98
PCDH9Q9HC56 MIR5092-201ENST00000583139 88 ntBASIC2.7□□□□□ -1.98
PCDH9Q9HC56 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.7□□□□□ -1.98
PCDH9Q9HC56 POLR3GP2-201ENST00000588366 668 ntBASIC2.7□□□□□ -1.98
PCDH9Q9HC56 AC113139.1-201ENST00000605049 239 ntBASIC2.7□□□□□ -1.98
PCDH9Q9HC56 AL359198.2-201ENST00000611836 194 ntBASIC2.7□□□□□ -1.98
PCDH9Q9HC56 MIR6134-201ENST00000617606 109 ntBASIC2.7□□□□□ -1.98
PCDH9Q9HC56 SCARNA4-202ENST00000625402 129 ntBASIC2.7□□□□□ -1.98
PCDH9Q9HC56 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
PCDH9Q9HC56 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
PCDH9Q9HC56 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.69□□□□□ -1.98
PCDH9Q9HC56 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.69□□□□□ -1.98
PCDH9Q9HC56 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.69□□□□□ -1.98
PCDH9Q9HC56 RNU6-78P-201ENST00000362897 107 ntBASIC2.69□□□□□ -1.98
PCDH9Q9HC56 RNU6-527P-201ENST00000363425 104 ntBASIC2.69□□□□□ -1.98
PCDH9Q9HC56 Y_RNA.151-201ENST00000363566 112 ntBASIC2.69□□□□□ -1.98
PCDH9Q9HC56 SNORA25.6-201ENST00000364121 118 ntBASIC2.69□□□□□ -1.98
PCDH9Q9HC56 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
PCDH9Q9HC56 DEFA7P-201ENST00000382676 285 ntBASIC2.69□□□□□ -1.98
PCDH9Q9HC56 U3.26-201ENST00000391236 204 ntBASIC2.69□□□□□ -1.98
PCDH9Q9HC56 AL356057.3-201ENST00000402607 340 ntBASIC2.69□□□□□ -1.98
PCDH9Q9HC56 FTH1P15-201ENST00000406984 280 ntBASIC2.69□□□□□ -1.98
PCDH9Q9HC56 HMGN2P35-201ENST00000412164 270 ntBASIC2.69□□□□□ -1.98
PCDH9Q9HC56 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.69□□□□□ -1.98
PCDH9Q9HC56 UBE2V1P4-201ENST00000425374 344 ntBASIC2.69□□□□□ -1.98
PCDH9Q9HC56 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.69□□□□□ -1.98
PCDH9Q9HC56 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.69□□□□□ -1.98
PCDH9Q9HC56 MTND1P17-201ENST00000448961 204 ntBASIC2.69□□□□□ -1.98
PCDH9Q9HC56 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
PCDH9Q9HC56 Y_RNA.635-201ENST00000459041 101 ntBASIC2.69□□□□□ -1.98
PCDH9Q9HC56 SRIP1-201ENST00000489235 288 ntBASIC2.69□□□□□ -1.98
PCDH9Q9HC56 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.69□□□□□ -1.98
PCDH9Q9HC56 AC113155.1-201ENST00000511141 769 ntBASIC2.69□□□□□ -1.98
PCDH9Q9HC56 RNU6-559P-201ENST00000516151 98 ntBASIC2.69□□□□□ -1.98
PCDH9Q9HC56 AP004607.1-201ENST00000524456 203 ntBASIC2.69□□□□□ -1.98
PCDH9Q9HC56 AC006199.1-201ENST00000548728 219 ntBASIC2.69□□□□□ -1.98
PCDH9Q9HC56 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.69□□□□□ -1.98
PCDH9Q9HC56 AC060766.3-201ENST00000591442 263 ntBASIC2.69□□□□□ -1.98
PCDH9Q9HC56 AC004852.3-201ENST00000614131 326 ntBASIC2.69□□□□□ -1.98
PCDH9Q9HC56 AC010378.1-201ENST00000619270 362 ntBASIC2.69□□□□□ -1.98
PCDH9Q9HC56 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.69□□□□□ -1.98
PCDH9Q9HC56 AC244517.12-201ENST00000623581 663 ntBASIC2.69□□□□□ -1.98
PCDH9Q9HC56 AC097372.5-201ENST00000623665 376 ntBASIC2.69□□□□□ -1.98
PCDH9Q9HC56 AC138627.2-201ENST00000624202 601 ntBASIC2.69□□□□□ -1.98
PCDH9Q9HC56 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.69□□□□□ -1.98
PCDH9Q9HC56 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
PCDH9Q9HC56 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.69□□□□□ -1.98
PCDH9Q9HC56 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PCDH9Q9HC56 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
PCDH9Q9HC56 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.68□□□□□ -1.98
PCDH9Q9HC56 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
PCDH9Q9HC56 Y_RNA.473-201ENST00000384333 102 ntBASIC2.68□□□□□ -1.98
PCDH9Q9HC56 SNORD116-20-201ENST00000384529 92 ntBASIC2.68□□□□□ -1.98
PCDH9Q9HC56 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
PCDH9Q9HC56 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.68□□□□□ -1.98
PCDH9Q9HC56 FABP5P14-201ENST00000437273 393 ntBASIC2.68□□□□□ -1.98
PCDH9Q9HC56 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.68□□□□□ -1.98
PCDH9Q9HC56 SNORD109B-201ENST00000458961 67 ntBASIC2.68□□□□□ -1.98
PCDH9Q9HC56 SNORD109A-201ENST00000459128 67 ntBASIC2.68□□□□□ -1.98
PCDH9Q9HC56 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.68□□□□□ -1.98
PCDH9Q9HC56 SNORA43.2-201ENST00000516652 128 ntBASIC2.68□□□□□ -1.98
PCDH9Q9HC56 RNU1-54P-201ENST00000517181 120 ntBASIC2.68□□□□□ -1.98
PCDH9Q9HC56 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.68□□□□□ -1.98
PCDH9Q9HC56 FRG2DP-202ENST00000566967 323 ntBASIC2.68□□□□□ -1.98
PCDH9Q9HC56 AC019193.3-201ENST00000609144 554 ntBASIC2.68□□□□□ -1.98
PCDH9Q9HC56 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.68□□□□□ -1.98
PCDH9Q9HC56 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.68□□□□□ -1.98
PCDH9Q9HC56 MTND4LP32-201ENST00000636111 270 ntBASIC2.68□□□□□ -1.98
PCDH9Q9HC56 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.68□□□□□ -1.98
PCDH9Q9HC56 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PCDH9Q9HC56 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.67□□□□□ -1.98
PCDH9Q9HC56 Y_RNA.387-201ENST00000383918 102 ntBASIC2.67□□□□□ -1.98
PCDH9Q9HC56 RNU6-790P-201ENST00000384479 105 ntBASIC2.67□□□□□ -1.98
PCDH9Q9HC56 Y_RNA.509-201ENST00000384506 99 ntBASIC2.67□□□□□ -1.98
PCDH9Q9HC56 RNU6-601P-201ENST00000384540 107 ntBASIC2.67□□□□□ -1.98
PCDH9Q9HC56 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
PCDH9Q9HC56 RN7SKP158-201ENST00000410453 326 ntBASIC2.67□□□□□ -1.98
PCDH9Q9HC56 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.67□□□□□ -1.98
PCDH9Q9HC56 Z82205.1-201ENST00000428456 297 ntBASIC2.67□□□□□ -1.98
PCDH9Q9HC56 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.67□□□□□ -1.98
PCDH9Q9HC56 AL161651.1-201ENST00000440882 223 ntBASIC2.67□□□□□ -1.98
PCDH9Q9HC56 Y_RNA.632-201ENST00000459189 102 ntBASIC2.67□□□□□ -1.98
PCDH9Q9HC56 MRPL42P6-201ENST00000486397 371 ntBASIC2.67□□□□□ -1.98
PCDH9Q9HC56 RPL23AP49-201ENST00000492925 468 ntBASIC2.67□□□□□ -1.98
PCDH9Q9HC56 RNA5SP356-201ENST00000515972 94 ntBASIC2.67□□□□□ -1.98
PCDH9Q9HC56 RNA5SP282-201ENST00000516355 108 ntBASIC2.67□□□□□ -1.98
PCDH9Q9HC56 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.67□□□□□ -1.98
PCDH9Q9HC56 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
PCDH9Q9HC56 AL356575.1-201ENST00000603008 283 ntBASIC2.67□□□□□ -1.98
PCDH9Q9HC56 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.67□□□□□ -1.98
PCDH9Q9HC56 AC022140.2-201ENST00000623500 188 ntBASIC2.67□□□□□ -1.98
PCDH9Q9HC56 U4.7-201ENST00000638126 106 ntBASIC2.67□□□□□ -1.98
PCDH9Q9HC56 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
PCDH9Q9HC56 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.66□□□□□ -1.98
PCDH9Q9HC56 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.66□□□□□ -1.98
PCDH9Q9HC56 CDC27P3-201ENST00000635418 1910 ntBASIC2.66□□□□□ -1.98
PCDH9Q9HC56 SNORD62.1-201ENST00000362541 86 ntBASIC2.66□□□□□ -1.98
PCDH9Q9HC56 RNU6-859P-201ENST00000362728 107 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms