Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 MTND3P8-201ENST00000412909 339 ntBASIC2.66□□□□□ -1.98
BRF2Q9HAW0 PMCHL2-203ENST00000457791 237 ntBASIC2.66□□□□□ -1.98
BRF2Q9HAW0 RPS29P26-201ENST00000477483 171 ntBASIC2.66□□□□□ -1.98
BRF2Q9HAW0 AC090096.1-201ENST00000489168 390 ntBASIC2.66□□□□□ -1.98
BRF2Q9HAW0 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.66□□□□□ -1.98
BRF2Q9HAW0 TRAV32-201ENST00000553993 340 ntBASIC2.66□□□□□ -1.98
BRF2Q9HAW0 MIR4742-201ENST00000581069 85 ntBASIC2.66□□□□□ -1.98
BRF2Q9HAW0 AC023043.2-201ENST00000589678 1026 ntBASIC2.66□□□□□ -1.98
BRF2Q9HAW0 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.66□□□□□ -1.98
BRF2Q9HAW0 AC093732.2-201ENST00000607950 274 ntBASIC2.66□□□□□ -1.98
BRF2Q9HAW0 AC005046.1-201ENST00000608515 625 ntBASIC2.66□□□□□ -1.98
BRF2Q9HAW0 AL359198.2-201ENST00000611836 194 ntBASIC2.66□□□□□ -1.98
BRF2Q9HAW0 AL442067.2-201ENST00000614033 363 ntBASIC2.66□□□□□ -1.98
BRF2Q9HAW0 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.66□□□□□ -1.98
BRF2Q9HAW0 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.66□□□□□ -1.98
BRF2Q9HAW0 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
BRF2Q9HAW0 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.66□□□□□ -1.98
BRF2Q9HAW0 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
BRF2Q9HAW0 RNU6-1317P-201ENST00000364582 104 ntBASIC2.65□□□□□ -1.99
BRF2Q9HAW0 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
BRF2Q9HAW0 BTF3L4P2-201ENST00000392798 346 ntBASIC2.65□□□□□ -1.99
BRF2Q9HAW0 UBA52P6-201ENST00000399822 382 ntBASIC2.65□□□□□ -1.99
BRF2Q9HAW0 RNU6-325P-201ENST00000411132 105 ntBASIC2.65□□□□□ -1.99
BRF2Q9HAW0 AL030996.1-201ENST00000411430 235 ntBASIC2.65□□□□□ -1.99
BRF2Q9HAW0 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.65□□□□□ -1.99
BRF2Q9HAW0 AC098614.3-201ENST00000438957 440 ntBASIC2.65□□□□□ -1.99
BRF2Q9HAW0 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.65□□□□□ -1.99
BRF2Q9HAW0 GSTA11P-201ENST00000452866 669 ntBASIC2.65□□□□□ -1.99
BRF2Q9HAW0 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.65□□□□□ -1.99
BRF2Q9HAW0 RNU7-26P-201ENST00000458980 63 ntBASIC2.65□□□□□ -1.99
BRF2Q9HAW0 RNU6-329P-201ENST00000459618 107 ntBASIC2.65□□□□□ -1.99
BRF2Q9HAW0 AC130509.1-201ENST00000464158 433 ntBASIC2.65□□□□□ -1.99
BRF2Q9HAW0 AL121594.1-201ENST00000475906 575 ntBASIC2.65□□□□□ -1.99
BRF2Q9HAW0 RN7SL297P-201ENST00000483161 293 ntBASIC2.65□□□□□ -1.99
BRF2Q9HAW0 AC046134.1-201ENST00000514454 666 ntBASIC2.65□□□□□ -1.99
BRF2Q9HAW0 RNU6-612P-201ENST00000516909 102 ntBASIC2.65□□□□□ -1.99
BRF2Q9HAW0 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.65□□□□□ -1.99
BRF2Q9HAW0 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.65□□□□□ -1.99
BRF2Q9HAW0 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.65□□□□□ -1.99
BRF2Q9HAW0 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.65□□□□□ -1.99
BRF2Q9HAW0 RPL30P11-203ENST00000598995 310 ntBASIC2.65□□□□□ -1.99
BRF2Q9HAW0 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.65□□□□□ -1.99
BRF2Q9HAW0 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
BRF2Q9HAW0 U4atac.1-201ENST00000618345 95 ntBASIC2.65□□□□□ -1.99
BRF2Q9HAW0 AP000560.1-201ENST00000624150 1937 ntBASIC2.65□□□□□ -1.99
BRF2Q9HAW0 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.64□□□□□ -1.99
BRF2Q9HAW0 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
BRF2Q9HAW0 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.64□□□□□ -1.99
BRF2Q9HAW0 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
BRF2Q9HAW0 VTRNA1-1-201ENST00000363120 99 ntBASIC2.64□□□□□ -1.99
BRF2Q9HAW0 RNU6-1141P-201ENST00000364520 107 ntBASIC2.64□□□□□ -1.99
BRF2Q9HAW0 Y_RNA.390-201ENST00000383932 102 ntBASIC2.64□□□□□ -1.99
BRF2Q9HAW0 MIR521-1-201ENST00000384902 87 ntBASIC2.64□□□□□ -1.99
BRF2Q9HAW0 CBX3P9-201ENST00000402326 552 ntBASIC2.64□□□□□ -1.99
BRF2Q9HAW0 AC138393.2-201ENST00000414742 246 ntBASIC2.64□□□□□ -1.99
BRF2Q9HAW0 AL590632.1-201ENST00000424289 371 ntBASIC2.64□□□□□ -1.99
BRF2Q9HAW0 MTCO3P46-201ENST00000425787 232 ntBASIC2.64□□□□□ -1.99
BRF2Q9HAW0 MTND3P9-201ENST00000429526 346 ntBASIC2.64□□□□□ -1.99
BRF2Q9HAW0 AC236972.1-201ENST00000433225 199 ntBASIC2.64□□□□□ -1.99
BRF2Q9HAW0 AL645568.3-201ENST00000433683 316 ntBASIC2.64□□□□□ -1.99
BRF2Q9HAW0 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.64□□□□□ -1.99
BRF2Q9HAW0 RPL39P40-201ENST00000445481 146 ntBASIC2.64□□□□□ -1.99
BRF2Q9HAW0 AC090515.1-201ENST00000465295 476 ntBASIC2.64□□□□□ -1.99
BRF2Q9HAW0 S100A11P2-201ENST00000467589 312 ntBASIC2.64□□□□□ -1.99
BRF2Q9HAW0 AC103975.1-201ENST00000482506 483 ntBASIC2.64□□□□□ -1.99
BRF2Q9HAW0 RNA5SP76-201ENST00000516277 87 ntBASIC2.64□□□□□ -1.99
BRF2Q9HAW0 RNU6-566P-201ENST00000516790 107 ntBASIC2.64□□□□□ -1.99
BRF2Q9HAW0 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.64□□□□□ -1.99
BRF2Q9HAW0 AC007375.1-201ENST00000554513 578 ntBASIC2.64□□□□□ -1.99
BRF2Q9HAW0 MIR4790-201ENST00000577799 79 ntBASIC2.64□□□□□ -1.99
BRF2Q9HAW0 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.64□□□□□ -1.99
BRF2Q9HAW0 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
BRF2Q9HAW0 AC023043.3-201ENST00000593113 385 ntBASIC2.64□□□□□ -1.99
BRF2Q9HAW0 AL138963.2-201ENST00000605137 226 ntBASIC2.64□□□□□ -1.99
BRF2Q9HAW0 AL159153.1-201ENST00000619688 317 ntBASIC2.64□□□□□ -1.99
BRF2Q9HAW0 DUXAP9-208ENST00000622815 614 ntBASIC2.64□□□□□ -1.99
BRF2Q9HAW0 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
BRF2Q9HAW0 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.64□□□□□ -1.99
BRF2Q9HAW0 AL161431.1-201ENST00000618966 4205 ntBASIC2.64□□□□□ -1.99
BRF2Q9HAW0 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
BRF2Q9HAW0 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.63□□□□□ -1.99
BRF2Q9HAW0 RNU6-845P-201ENST00000362578 103 ntBASIC2.63□□□□□ -1.99
BRF2Q9HAW0 Y_RNA.279-201ENST00000364763 95 ntBASIC2.63□□□□□ -1.99
BRF2Q9HAW0 RNU6-95P-201ENST00000384697 107 ntBASIC2.63□□□□□ -1.99
BRF2Q9HAW0 RN7SKP32-201ENST00000410167 303 ntBASIC2.63□□□□□ -1.99
BRF2Q9HAW0 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.63□□□□□ -1.99
BRF2Q9HAW0 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.63□□□□□ -1.99
BRF2Q9HAW0 AC008267.5-201ENST00000424928 265 ntBASIC2.63□□□□□ -1.99
BRF2Q9HAW0 PCMTD1P1-201ENST00000455560 355 ntBASIC2.63□□□□□ -1.99
BRF2Q9HAW0 AIG1P1-201ENST00000503376 148 ntBASIC2.63□□□□□ -1.99
BRF2Q9HAW0 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.63□□□□□ -1.99
BRF2Q9HAW0 Y_RNA.682-201ENST00000516457 100 ntBASIC2.63□□□□□ -1.99
BRF2Q9HAW0 RNU7-30P-201ENST00000516835 62 ntBASIC2.63□□□□□ -1.99
BRF2Q9HAW0 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.63□□□□□ -1.99
BRF2Q9HAW0 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.63□□□□□ -1.99
BRF2Q9HAW0 AC118273.2-201ENST00000532092 465 ntBASIC2.63□□□□□ -1.99
BRF2Q9HAW0 AC022080.3-201ENST00000544433 482 ntBASIC2.63□□□□□ -1.99
BRF2Q9HAW0 HSPE1P4-201ENST00000550617 308 ntBASIC2.63□□□□□ -1.99
BRF2Q9HAW0 SCOCP1-201ENST00000554676 349 ntBASIC2.63□□□□□ -1.99
BRF2Q9HAW0 MIR548S-201ENST00000581352 82 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms